cct3

Ensembl ID:
ENSDARG00000016173
ZFIN ID:
ZDB-GENE-020419-5
Description:
T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_775357]
Human Orthologue:
CCT3
Human Description:
chaperonin containing TCP1, subunit 3 (gamma) [Source:HGNC Symbol;Acc:1616]
Mouse Orthologue:
Cct3
Mouse Description:
chaperonin containing Tcp1, subunit 3 (gamma) Gene [Source:MGI Symbol;Acc:MGI:104708]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa1761 Essential Splice Site Available for shipment Available now
sa28686 Missense Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa1761
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003752 Essential Splice Site 47 543 3 14

The following transcripts of ENSDARG00000016173 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 32723902)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 30462417
KASP Assay ID:
554-1754.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CCATAGCAGACATCATCAGGACATGCCTAGGACCAAGGGCTATGATGAAG[G/A]TGCGCTTAAGATGTTCACGTTATCATTTTCCCAAGTGAATCTTTGTTATA
Associated Phenotype:
Data not yet available

Mutation Details

Allele Name:
sa28686
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Missense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003752 Missense 56 543 4 14

The following transcripts of ENSDARG00000016173 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 32723796)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 30462311
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGATAAAAATATGTTTTGTCTGCAGATGCTGCTGGATCCCATGGGTGGTA[T/A]CGTCATGACCAATGATGGCAATGCCATTTTGAGAGAGGTGATTTGAACCC
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

  • Visceral fat: Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. (View Study)

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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