tmprss4a

Ensembl ID:
ENSDARG00000006693
ZFIN ID:
ZDB-GENE-061103-631
Description:
transmembrane protease, serine 4a [Source:RefSeq peptide;Acc:NP_001071206]
Human Orthologue:
TMPRSS4
Human Description:
transmembrane protease, serine 4 [Source:HGNC Symbol;Acc:11878]
Mouse Orthologue:
Tmprss4
Mouse Description:
transmembrane protease, serine 4 Gene [Source:MGI Symbol;Acc:MGI:2384877]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa6366 Essential Splice Site Mutation detected in F1 DNA During 2016
sa32017 Nonsense Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa6366
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
A > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101301 Essential Splice Site 170 430 7 13
ENSDART00000131290   None 154 None 6
ENSDART00000136238 Essential Splice Site 227 309 7 9
Genomic Location (Zv9):
Chromosome 15 (position 13010321)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 12520496
KASP Assay ID:
554-5208.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TGGTCATTATTCAGTTTGAKTGTAAACATTGTCATTTTTTTTTTTTTTTC[A/T]GTAAGGTATGCAGTACWGGAACTGTCATCTCATTATCATGCTCTGGTAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32017
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101301 Nonsense 249 430 9 13
ENSDART00000131290   None 154 None 6
ENSDART00000136238 Nonsense 306 309 9 9
Genomic Location (Zv9):
Chromosome 15 (position 13007516)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 12523301
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GTCACATTGTTGTGTGTTGTTTAGGGATGGCAGGAAAGCTCTGAGCCGGT[G/A]GACCGTCGTCTCAGGAATTACGTATCTGAGTTCTACTCCATCTTCATATG
Associated Phenotype:
Not determined

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