si:ch211-287j19.6

Ensembl ID:
ENSDARG00000001470
ZFIN IDs:
ZDB-GENE-070424-69, ZDB-GENE-070705-176
Description:
hypothetical protein LOC100038770 [Source:RefSeq peptide;Acc:NP_001083019]
Human Orthologues:
AL645933.1, AZGP1, FCGRT, HFE, MICB, MR1
Human Descriptions:
alpha-2-glycoprotein 1, zinc-binding [Source:HGNC Symbol;Acc:910]
Fc fragment of IgG, receptor, transporter, alpha [Source:HGNC Symbol;Acc:3621]
hemochromatosis [Source:HGNC Symbol;Acc:4886]
major histocompatibility complex, class I-related [Source:HGNC Symbol;Acc:4975]
MHC class I polypeptide-related sequence A isoform 2 (MICA*00801) precursor [Source:RefSeq peptide;
MHC class I polypeptide-related sequence B [Source:HGNC Symbol;Acc:7091]
Mouse Orthologues:
Azgp1, CR974466.3, Fcgrt, Gm11127, Gm7030, Gm8815, Gm8909, H2-Bl, H2-D1, H2-gs10, H2-K1, H2-K2, H2-M2, H2-M3, H2-Q10, H2-Q2, H2-Q6, H2-Q7, H2-Q8, H2-T10, H2-T22, H2-T23, H2-T3, Hfe, Mill1, Mill2, Mr1
Mouse Descriptions:
alpha-2-glycoprotein 1, zinc Gene [Source:MGI Symbol;Acc:MGI:103163]
Fc receptor, IgG, alpha chain transporter Gene [Source:MGI Symbol;Acc:MGI:103017]
hemochromatosis Gene [Source:MGI Symbol;Acc:MGI:109191]
histocompatibility 2, blastocyst Gene [Source:MGI Symbol;Acc:MGI:892004]
histocompatibility 2, D region locus 1 Gene [Source:MGI Symbol;Acc:MGI:95896]
histocompatibility 2, K region locus 2 Pseudogene [Source:MGI Symbol;Acc:MGI:95906]
histocompatibility 2, K1, K region Gene [Source:MGI Symbol;Acc:MGI:95904]
histocompatibility 2, M region locus 2 Gene [Source:MGI Symbol;Acc:MGI:95914]
histocompatibility 2, M region locus 3 Gene [Source:MGI Symbol;Acc:MGI:95915]
histocompatibility 2, Q region locus 10 Gene [Source:MGI Symbol;Acc:MGI:95929]
histocompatibility 2, Q region locus 2 [Source:RefSeq peptide;Acc:NP_034522]
histocompatibility 2, Q region locus 2 Gene [Source:MGI Symbol;Acc:MGI:95931]
histocompatibility 2, Q region locus 6 Gene [Source:MGI Symbol;Acc:MGI:95935]
histocompatibility 2, Q region locus 7 Gene [Source:MGI Symbol;Acc:MGI:95936]
histocompatibility 2, Q region locus 8 Gene [Source:MGI Symbol;Acc:MGI:95937]
histocompatibility 2, T region locus 10 Gene [Source:MGI Symbol;Acc:MGI:95942]
histocompatibility 2, T region locus 22 Gene [Source:MGI Symbol;Acc:MGI:95956]
histocompatibility 2, T region locus 23 Gene [Source:MGI Symbol;Acc:MGI:95957]
histocompatibility 2, T region locus 3 Gene [Source:MGI Symbol;Acc:MGI:95959]
major histocompatibility complex, class I-related Gene [Source:MGI Symbol;Acc:MGI:1195463]
MHC class I like protein GS10 Gene [Source:MGI Symbol;Acc:MGI:3808875]
MHC I like leukocyte 1 Gene [Source:MGI Symbol;Acc:MGI:2179988]
MHC I like leukocyte 2 Gene [Source:MGI Symbol;Acc:MGI:2179989]
predicted gene 11127 Gene [Source:MGI Symbol;Acc:MGI:3779381]
predicted gene 7030 Pseudogene [Source:MGI Symbol;Acc:MGI:3647514]
predicted gene 8815 Pseudogene [Source:MGI Symbol;Acc:MGI:3648635]
predicted gene 8909 Gene [Source:MGI Symbol;Acc:MGI:3704134]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa19561 Nonsense Available for shipment Available now
sa32752 Nonsense Mutation detected in F1 DNA During 2017

Mutation Details

Allele Name:
sa19561
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101143 Nonsense 33 350 2 7

The following transcripts of ENSDARG00000001470 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 1 (position 47618548)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 46430209
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TTCTCTTTTTAATACAGAAAAACACTCCCTCTACTACATATACACAGCTT[T/A]ATCCAGACCTGTCCACCTGCCGGGCATCTATGAATTCACTGCAATGGGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32752
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2017.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101143 Nonsense 201 350 3 7

The following transcripts of ENSDARG00000001470 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 1 (position 47617736)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 46429397
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GGCTACCTGGAAAAAGAGTGTGTGGACTGGCTCAACAAATTCAGAGAATA[T/A]GGAGATCAGGAGCTTAGAGAAGGCTGTGAGTTTATATACAGTACAGCATT
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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