cntn2

Ensembl ID:
ENSDARG00000000472
ZFIN IDs:
ZDB-GENE-990630-12, ZDB-GENE-990630-12
Description:
contactin-2 [Source:RefSeq peptide;Acc:NP_571521]
Human Orthologue:
CNTN2
Human Description:
contactin 2 (axonal) [Source:HGNC Symbol;Acc:2172]
Mouse Orthologue:
Cntn2
Mouse Description:
contactin 2 Gene [Source:MGI Symbol;Acc:MGI:104518]

Alleles

There are 8 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa41829 Nonsense Mutation detected in F1 DNA During 2016
sa9412 Nonsense Available for shipment Available now
sa19006 Nonsense Mutation detected in F1 DNA During 2016
sa41830 Nonsense Mutation detected in F1 DNA During 2016
sa35078 Nonsense Mutation detected in F1 DNA During 2016
sa41831 Nonsense Mutation detected in F1 DNA During 2016
sa21903 Nonsense Available for shipment Available now
sa12173 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa41829
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 40 853 2 18
ENSDART00000103800 Nonsense 38 412 2 10
Genomic Location (Zv9):
Chromosome 11 (position 24886566)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23725865
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GTGGGGATGTGTGTGTGTCGGGTCATGACAGTGGGCCGGTGTTTGAAGAG[C/T]AGCCATCTAGTCTGATTTACCCAGAGGGGATGCCAGAAGGCAAGGTGACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9412
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 109 853 3 18
ENSDART00000103800   None 412 None 10
ENSDART00000000486 Nonsense 109 853 3 18
ENSDART00000103800   None 412 None 10
Genomic Location (Zv9):
Chromosome 11 (position 24888728)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23728027
KASP Assay ID:
2260-4257.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CTTGTGATCAACAACCCTCAGAATGGGCGAGATGGCGGCTCGTACCAGTG[T/A]CTCGCAATCAACCGATGCRGCACCATTGTTAGCCGCGTCGCTAATCTCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19006
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 109 853 3 18
ENSDART00000103800   None 412 None 10
ENSDART00000000486 Nonsense 109 853 3 18
ENSDART00000103800   None 412 None 10
Genomic Location (Zv9):
Chromosome 11 (position 24888728)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23728027
KASP Assay ID:
2260-4257.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CTTGTGATCAACAACCCTCAGAATGGGCGAGATGGCGGCTCGTACCAGTG[T/A]CTCGCAATCAACCGATGCGGCACCATTGTTAGCCGCGTCGCTAATCTCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41830
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 261 853 6 18
ENSDART00000103800   None 412 None 10
Genomic Location (Zv9):
Chromosome 11 (position 24889426)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23728725
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TTTCCCGCTGAGACATACGCTTTATCAGGGCAAACCGCACAGCTGGAATG[C/A]TTTGCCTATGGCAAGTAAGTCCCCCTTAACTCCTAGAGATCACTGCAGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35078
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 311 853 7 18
ENSDART00000103800   None 412 None 10
Genomic Location (Zv9):
Chromosome 11 (position 24889700)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23728999
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ATTCCTGAACTGAATTTCGATGACGAGGGCATGTATGAGTGTGAGGTTTA[C/A]AACTCAGAAGGCCGTGAGACGCATCAGGGACGTGTTTCTGTGCAAGGTAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41831
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 524 853 12 18
ENSDART00000103800 Nonsense 83 412 4 10
Genomic Location (Zv9):
Chromosome 11 (position 24895113)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23734412
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AAACAGATGCCACAAAAATCACACTAGCGCCCTCTAATGCTGATATCAAT[C/T]AGGGTGAAAATGCCACTTTGCAGTGCCATGCATCACATGACCCTACCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21903
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 693 853 15 18
ENSDART00000103800 Nonsense 252 412 7 10
Genomic Location (Zv9):
Chromosome 11 (position 24899036)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23738335
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCTTCGGCCCTGGATGGATTATGAGTTCCAGGTCATTGCCAGCAACATCT[T/A]GGGCAGCGGAGAACCAAGCATGCCTTCCCCGCGTGCACAAACCAAAGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12173
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 775 853 17 18
ENSDART00000103800 Nonsense 334 412 9 10
Genomic Location (Zv9):
Chromosome 11 (position 24900509)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23739808
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
ACATGGACGGTGGTGAAGGTGCCAAATGTGGAGTCATCTCGATATGTGTA[C/A]AGCAATGACAGTCTGACAGCATACTGCCCGTTCGAGGTCCGAATCAAGGC
Associated Phenotype:
Not determined

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