<=>End overlap alignment

Alignment #1 HSP: 364 bps / non-identical: 50 bps

Full alignment

  AP000457.3	133110	GTGGGAGAGGCTTCTCTGCCTTTGGGAAAAAAAGGGAAGAGTGGGAAGCA	133159
			||||||||||||||||||||||||||||||||||||||||||||||||||
C  KC877795.1	364	GTGGGAGAGGCTTCTCTGCCTTTGGGAAAAAAAGGGAAGAGTGGGAAGCA	315

  AP000457.3	133160	CTGTGTCTTGTGGTTTGAGTGCCACCTTAGGTGCAGTACAATAGAACACC	133209
			||||||||||||||||||||||||||||||||||||||||||||||||||
C  KC877795.1	314	CTGTGTCTTGTGGTTTGAGTGCCACCTTAGGTGCAGTACAATAGAACACC	265

  AP000457.3	133210	AGGTAGACTTCTAAGCTTTTTGCCGCTAGACCCCAACTCCAAGGTGGCAT	133259
			|||||||||||||||||||||||| |||||||||||||||||||||||||
C  KC877795.1	264	AGGTAGACTTCTAAGCTTTTTGCCTCTAGACCCCAACTCCAAGGTGGCAT	215

  AP000457.3	133260	CTCTGGACCCACCTTAGGCCTGGGGAAAGTCACCACCTTTAATGGAAGAA	133309
			||||||||||||||||||||||||||||||||||||||||||||||||||
C  KC877795.1	214	CTCTGGACCCACCTTAGGCCTGGGGAAAGTCACCACCTTTAATGGAAGAA	165

  AP000457.3	133310	CAGATGCCTGGCTGACTCTGCCACCTGCTGATTGTATAACCCCAGAACCT	133359
			||||||||||||||||||||||||||||||||||||||||||||||||||
C  KC877795.1	164	CAGATGCCTGGCTGACTCTGCCACCTGCTGATTGTATAACCCCAGAACCT	115

  AP000457.3	133360	TGAGCAAACAAAGGCAGTACACAGGAAATGGATACAGGTGGCCTTGGGGG	133409
			||||||||||||||||||||||||||||||||||||||||||||||||||
C  KC877795.1	114	TGAGCAAACAAAGGCAGTACACAGGAAATGGATACAGGTGGCCTTGGGGG	65

  AP000457.3	133410	AGAACCAGTGTTGTGCTGGCTTCAGGTCTGACTCAGTGCAGTCATAGTGA	133459
			||||||||||||||||||||||||||||||||||||||||||||||||||
C  KC877795.1	64	AGAACCAGTGTTGTGCTGGCTTCAGGTCTGACTCAGTGCAGTCATAGTGA	15

  AP000457.3	133460	TGGTGGCTTGTGTC	133473
			||||||||||||||
C  KC877795.1	14	TGGTGGCTTGTGTC	1

Compact alignment

skip 100 bps 100% identity alignment

  AP000457.3	133210	AGGTAGACTTCTAAGCTTTTTGCCGCTAGACCCCAACTCCAAGGTGGCAT	133259
			|||||||||||||||||||||||| |||||||||||||||||||||||||
C  KC877795.1	264	AGGTAGACTTCTAAGCTTTTTGCCTCTAGACCCCAACTCCAAGGTGGCAT	215

skip 214 bps 100% identity alignment

Overview

Query
AP000457.3 - 165221 bps
Hit
KC877795.1 - 364 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 364 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
199.7253036413311013347311364-1
Short-link