<=>End overlap alignment

Alignment #1 HSP: 487 bps / non-identical: 50 bps

Full alignment

AF067845.1	30936	TATAAAATTAGAAGTAGAAGGAAAATTTCTCAGTATGATAAAGGGCATTT	30985
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	1	TATAAAATTAGAAGTAGAAGGAAAATTTCTCAGTATGATAAAGGGCATTT	50

AF067845.1	30986	ATGAAAAGCCACAGCCAAGACATCCAGTTTCCTGTCCAACATTATGCAAT	31035
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	51	ATGAAAAGCCACAGCCAAGACATCCAGTTTCCTGTCCAACATTATGCAAT	100

AF067845.1	31036	AATAGAGGGAATAAATCTCCAAGAAGACACAGCAATCCTTAATGTATATG	31085
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	101	AATAGAGGGAATAAATCTCCAAGAAGACACAGCAATCCTTAATGTATATG	150

AF067845.1	31086	CACCTGACAACAGTGTGTCAAAATACATAAGGCAAAGACTGATACAACTG	31135
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	151	CACCTGACAACAGTGTGTCAAAATACATAAGGCAAAGACTGATACAACTG	200

AF067845.1	31136	CCAGGAGGAATAGATGAGTCCACCATTAATGCTGGAGATTTTGAGTATCT	31185
			|||||||||||||||||||||||||||||||||||||||||||||| |||
KC877200.1	201	CCAGGAGGAATAGATGAGTCCACCATTAATGCTGGAGATTTTGAGTGTCT	250

AF067845.1	31186	GCTCTCAGTAATTGACAGATCCAGCAGGCAGAAATTCAGAAATTCAGCAA	31235
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	251	GCTCTCAGTAATTGACAGATCCAGCAGGCAGAAATTCAGAAATTCAGCAA	300

AF067845.1	31236	TGACAGGGTTGAACTGAGTGATACCATCAATCAACTGAATCTGACATCTG	31285
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	301	TGACAGGGTTGAACTGAGTGATACCATCAATCAACTGAATCTGACATCTG	350

AF067845.1	31286	TAGGCTACTTCATCCAACAGCAGCAGAACACAGATTCTTCCCAAGCTCGC	31335
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	351	TAGGCTACTTCATCCAACAGCAGCAGAACACAGATTCTTCCCAAGCTCGC	400

AF067845.1	31336	ACAGAACATTCGCCAAGATAGGCCACATTCTGGGCCAAAAATCTAGACAC	31385
			||||||||||||||||||||||||||||||||||||||||||||||||||
KC877200.1	401	ACAGAACATTCGCCAAGATAGGCCACATTCTGGGCCAAAAATCTAGACAC	450

AF067845.1	31386	AGATCTCAACCTTTTCATAAAAGTTACCTCGACATAG	31422
			|||||||||||||||||||||||||||||||||||||
KC877200.1	451	AGATCTCAACCTTTTCATAAAAGTTACCTCGACATAG	487

Compact alignment

skip 200 bps 100% identity alignment

AF067845.1	31136	CCAGGAGGAATAGATGAGTCCACCATTAATGCTGGAGATTTTGAGTATCT	31185
			|||||||||||||||||||||||||||||||||||||||||||||| |||
KC877200.1	201	CCAGGAGGAATAGATGAGTCCACCATTAATGCTGGAGATTTTGAGTGTCT	250

skip 237 bps 100% identity alignment

Overview

Query
AF067845.1 - 108932 bps
Hit
KC877200.1 - 487 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 487 bps)
Best alignment cartoon

Alternate alignments

Short-link