<=>End overlap alignment
Alignment #1
HSP: 310 bps / non-identical: 317 bps
Full alignment
FP245430.4 18974 GGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAG 19023 ||||| || |||||||||||||||| ||||||||||||||||| |||||| FP245434.4 28032 GGCACAGTAGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGCAG 28081 FP245430.4 19024 GCAGATCAC--GAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGA 19071 | ||| || |||| |||||| ||||||||| |||||| ||||| | | FP245434.4 28082 GTGGATTACCTGAGGCCAGGAGTTTGAGACCAGCCTGGCCAACATAGCAA 28131 FP245430.4 19072 AACCCTGTCTCTACTAAAAATACAAAAA---TTAGCCGGGTGTAGTGGCG 19118 ||||| |||||||||||||||||||||| |||||||||||| ||||| FP245434.4 28132 AACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGTGTGGTGGCA 28181 FP245430.4 19119 GGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAA-TGGTGT 19167 ||| |||||| |||||||||||||||||||||||||||||||| || | | FP245434.4 28182 GGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACTGCT-T 28230 FP245430.4 19168 GAAGCTGGGAGGCGGAGCTTGCAGTGAGCAGAGATTGCGCCACTGCACTC 19217 ||| | ||||| |||| ||||||||| ||||||| |||| || |||| FP245434.4 28231 GAACCCAGGAGGTGGAGGCCGCAGTGAGCTGAGATTGTGCCATTGTACTC 28280 FP245430.4 19218 CAGCCTGGGCGAGA-GAGCGAGACTCCACCTCAAAAAAAAAAAAAAGAAA 19266 |||||||||| | | |||| | |||| ||||||||||||||||| ||| FP245434.4 28281 CAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAA 28330 FP245430.4 19267 AGAAAAAGAAAAAGAAG 19283 |||| ||||| |||||| FP245434.4 28331 AGAAGAAGAAGAAGAAG 28347
Overview
- Query
- FP245430.4 - 30692 bps
- Hit
- FP245434.4 - 31441 bps
- Total alignments
- 15
- Best alignment
- alignment #1 (HSP: 310 bps)
- Best alignment cartoon
Alternate alignments
| # | %ID | score | HSP | start | end | strand | hstart | hend | hstrand |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.49 | 156 | 310 | 18974 | 19283 | 1 | 28032 | 28347 | 1 |
| 2 | 83.97 | 143 | 292 | 18978 | 19269 | 1 | 7104 | 7396 | 1 |
| 3 | 82.84 | 140 | 294 | 8575 | 8868 | 1 | 7427 | 7723 | 1 |
| 4 | 85.6 | 140 | 248 | 24362 | 24609 | -1 | 7440 | 7689 | 1 |
| 5 | 84.92 | 163 | 305 | 18978 | 19282 | -1 | 12225 | 12529 | 1 |
| 6 | 84.96 | 155 | 287 | 8577 | 8863 | -1 | 12253 | 12538 | 1 |
| 7 | 94.92 | 35 | 57 | 12263 | 12319 | -1 | 15772 | 15830 | 1 |
| 8 | 86.06 | 164 | 287 | 8577 | 8863 | -1 | 16776 | 17062 | 1 |
| 9 | 80.83 | 121 | 289 | 3084 | 3372 | -1 | 21479 | 21765 | 1 |
| 10 | 83.16 | 137 | 287 | 8577 | 8863 | 1 | 21481 | 21765 | 1 |
| 11 | 85.53 | 163 | 299 | 18969 | 19267 | 1 | 21481 | 21777 | 1 |
| 12 | 82.88 | 121 | 258 | 24363 | 24620 | -1 | 21481 | 21737 | 1 |
| 13 | 81.6 | 124 | 285 | 24340 | 24624 | -1 | 27107 | 27394 | 1 |
| 14 | 83.8 | 141 | 281 | 8577 | 8857 | 1 | 27111 | 27394 | 1 |
| 15 | 83.39 | 151 | 302 | 18969 | 19270 | 1 | 27111 | 27423 | 1 |
