<=>End overlap alignment

Alignment #1 HSP: 2330 bps / non-identical: 2372 bps

Full alignment

FP236246.1	41222	TTCTGGGGTTTAGTTAGCAAAAGCAGTCTTGATCCCTTTGACCATATTTA	41271
			|||||||| |||||| | ||||| ||||| |||||||||||| |||||||
FP101904.2	95269	TTCTGGGGCTTAGTTTGTAAAAGTAGTCTGGATCCCTTTGACAATATTTA	95318

FP236246.1	41272	GGGTCCTGTTGTTCTGCTTGTGCGCTTTAGCATGGCCACGGGCTGGCTGT	41321
			|| ||||  ||||||| | ||||||||||||||||||| ||||||| |||
FP101904.2	95319	GGTTCCTCCTGTTCTGTTGGTGCGCTTTAGCATGGCCATGGGCTGGTTGT	95368

FP236246.1	41322	GCATGTGGAAGTCAGTTCTCATGCTGGTGGTCGGGGG-CGCTACCTTGTG	41370
			|||||||||||| | | ||||| || ||||| ||||| ||||||||  ||
FP101904.2	95369	GCATGTGGAAGTTACTCCTCATCCTTGTGGTTGGGGGGCGCTACCTCATG	95418

FP236246.1	41371	TGAAGCTGCCACAAACCCTGTGCGAGGCT-ATGCTGAGACCCTGTTGGTG	41419
			| ||| |||| |||||||||||  ||| | || || ||||||| ||||| 
FP101904.2	95419	TAAAGTTGCCGCAAACCCTGTGT-AGGGTGATACTCAGACCCTTTTGGT-	95466

FP236246.1	41420	TAGGTGATCCACGGTCAGGTTTCCGGGTGCCTCTTTTCACAACGAGACTG	41469
			      |||            |||| |||||||||||||||| | |||||
FP101904.2	95467	------ATC------------TCCGTGTGCCTCTTTTCACAATGTGACTG	95498

FP236246.1	41470	CTACTGATTAAA---------------------------TGGCGACCTTA	41492
			||||||||||||                           |||| ||||| 
FP101904.2	95499	CTACTGATTAAACGGGCAGCCTTGTTGCTACTGATTAAATGGCAACCTTG	95548

FP236246.1	41493	CTGTATTTGAGTGTGTGTTTTACCTCATGCATAAGTGCAGCTTTTCTGAA	41542
			 |||||||||||||| ||||||| ||||||||||| ||||||||||||||
FP101904.2	95549	TTGTATTTGAGTGTGCGTTTTACTTCATGCATAAGCGCAGCTTTTCTGAA	95598

FP236246.1	41543	CCAAATCACATGGGTGCTGAATCCAGGAGAGAGAAAGTTTCCCTGAGAGA	41592
			||||| ||||||||||||||||||||||||||||||||||||||||||||
FP101904.2	95599	CCAAAGCACATGGGTGCTGAATCCAGGAGAGAGAAAGTTTCCCTGAGAGA	95648

FP236246.1	41593	GGCTGTTTCTCACCCCATGCTTACTGTGCATCCTCCCATCTGAGAGAAAA	41642
			|||||||||||||||| || |||||||||||||||| |||| |||| |||
FP101904.2	95649	GGCTGTTTCTCACCCCGTGTTTACTGTGCATCCTCCTATCTCAGAGGAAA	95698

FP236246.1	41643	TATCTGAACGCGCATGTATGAGACAGGTTTTCCGAACTTTATGAAGAAGG	41692
			 | || |||  |||||| || |||||||||||||||| | ||| ||||| 
FP101904.2	95699	CACCTAAACATGCATGTGTGGGACAGGTTTTCCGAACATCATGGAGAAGA	95748

FP236246.1	41693	CGTGACCAGAGCGCTACATCTCCGAATGAGTGCTTCTGGAGCATTTTCAA	41742
			|||  ||||||| || || ||||||||||||||||| ||||| |||||||
FP101904.2	95749	CGTAGCCAGAGCTCTGCACCTCCGAATGAGTGCTTCCGGAGCGTTTTCAA	95798

FP236246.1	41743	GTCACGTCCACTCCTGAGTTAAAGAGGCAGATCCCTAAACTCTGTTCCAT	41792
			|||||||||||||||||||| |||||||||||| ||||||||  ||||||
FP101904.2	95799	GTCACGTCCACTCCTGAGTTCAAGAGGCAGATCTCTAAACTCCATTCCAT	95848

FP236246.1	41793	TGAGAGCACCACCACCCTTTCCAGAATACTTTGTCACATACAGGCTTATG	41842
			 || |||||||||||||||| |||||| ||||||||||||||||||||||
FP101904.2	95849	GGAAAGCACCACCACCCTTTTCAGAATGCTTTGTCACATACAGGCTTATG	95898

FP236246.1	41843	AAGATTGAAAATAATTCTTGAGTTAGGCTATTAAAGAGAGGTGTGGAATC	41892
			|||||||||||||||||||| |||||| |||||| |||||||||||||||
FP101904.2	95899	AAGATTGAAAATAATTCTTGTGTTAGGGTATTAAGGAGAGGTGTGGAATC	95948

FP236246.1	41893	ATCTCAGAACACAACTTTAGACTTTAGTTATGTATTACCAGCGTGATTTC	41942
			|||||||||||||||||| |||||| |||| |||| | ||| ||||||||
FP101904.2	95949	ATCTCAGAACACAACTTTGGACTTTCGTTAGGTATGATCAGTGTGATTTC	95998

FP236246.1	41943	TTGAGGGGGAAAAAGTGCACAAAAAGATGCCAAAGGGCGGTCAATTTGGT	41992
			|||| ||| || | ||||||| ||| || ||||||| ||||||  |||||
FP101904.2	95999	TTGAAGGGTAACA-GTGCACATAAACATACCAAAGGACGGTCATCTTGGT	96047

FP236246.1	41993	GAGGTAATAAACAAACAGGTAAAA-TAAAAACGAAAGAAGAGTAA-AACT	42040
			||| | ||||| ||| |||||||| |||||| ||  ||||||||| ||||
FP101904.2	96048	GAGATGATAAAGAAATAGGTAAAAATAAAAATGAGCGAAGAGTAAGAACT	96097

FP236246.1	42041	GTGGTTGTAAATTGAAAATAACCAGGACAAGTCAGGAAACAATATTGATA	42090
			||||||||||| |||||||||||||||||||||||| |||  |||| |||
FP101904.2	96098	GTGGTTGTAAACTGAAAATAACCAGGACAAGTCAGGCAACGCTATTCATA	96147

FP236246.1	42091	TACACTGGGTCCCTTGAGAGTGTGATCGGCAGACGTGAACTGGCCTGTCT	42140
			|||||||||||||||||||||||||||||||||||||||||||||| |||
FP101904.2	96148	TACACTGGGTCCCTTGAGAGTGTGATCGGCAGACGTGAACTGGCCTATCT	96197

FP236246.1	42141	TAAGATAACTTGTGCAGGGCATCGGCAGTCGACAGAGTGTGAG-CAATCA	42189
			||||||||||| |||||||||||||| |||||||||| |  |  | ||| 
FP101904.2	96198	TAAGATAACTTATGCAGGGCATCGGCCGTCGACAGAGGGCAAAACTATCC	96247

FP236246.1	42190	AAGGAAAAAACTCATCTCTGCAACCAGGGTTGGAAGCGGAACCATTCCAT	42239
			||||||||| |||||| ||| |||||||||||||| ||||||||||||| 
FP101904.2	96248	AAGGAAAAA-CTCATCCCTGTAACCAGGGTTGGAATCGGAACCATTCCAG	96296

FP236246.1	42240	TAAAAACTGGGACAATGTCAAATACGACACAGTGGGCACTGCATCTAGAT	42289
			||| ||||||||||||||||||||| |||||| ||||||||||||||| |
FP101904.2	96297	TAACAACTGGGACAATGTCAAATACAACACAGCGGGCACTGCATCTAGTT	96346

FP236246.1	42290	GTCGTGGTGGAGGACCCAGGTAAAAGGAAGCTTTCTGTGGAATGGAGGAA	42339
			|| ||||||||||||||||||||||||||||||||||||||||||| |||
FP101904.2	96347	GTGGTGGTGGAGGACCCAGGTAAAAGGAAGCTTTCTGTGGAATGGAAGAA	96396

FP236246.1	42340	AGAGCATTCTTCTCAGCCTGATTCTCTTCATGTAACAAACCTCATCATGA	42389
			|||||||||||||||||||| |||||||||| ||||||||||||| ||||
FP101904.2	96397	AGAGCATTCTTCTCAGCCTGGTTCTCTTCATTTAACAAACCTCATAATGA	96446

FP236246.1	42390	GAGGGTGGTAAGTGCCTGGAAGACGGTGACTTAAAGCAATATCAAAGGAA	42439
			||||||| |||||||||||||||| |||||||||||||||||||||||||
FP101904.2	96447	GAGGGTGTTAAGTGCCTGGAAGACAGTGACTTAAAGCAATATCAAAGGAA	96496

FP236246.1	42440	GGAAAGGAAAGAAAGAAAAACCATTTCTAAGAAATACATCCACCCCTCCA	42489
			||||||||||||| ||||| |  |||  | ||||| ||||||||||||||
FP101904.2	96497	GGAAAGGAAAGAAGGAAAAGCTGTTTTGAGGAAATGCATCCACCCCTCCA	96546

FP236246.1	42490	AAACAGAGAAAAAAGAAAAGAGAACGTCAGAAATAAGTTACCGTTTTCAT	42539
			|||      ||| ||||||     ||||||||||||||||||  ||||||
FP101904.2	96547	AAA------AAAGAGAAAA-----CGTCAGAAATAAGTTACCTGTTTCAT	96585

FP236246.1	42540	CCCGAAGTTCTCCTGAAAAGTAAATTTACAAATAGTCATGTAAAT----G	42585
			|| |||||||||||| |||||||||||||||| ||||| ||||||    |
FP101904.2	96586	CCTGAAGTTCTCCTGGAAAGTAAATTTACAAAGAGTCACGTAAATAAATG	96635

FP236246.1	42586	TTAAGGAAACCACGACAGATAGTAAAAAGAAGAGGACAATTGCCAGCCTT	42635
			| ||||||||||||||||||||||| ||||||| |||| ||||||| | |
FP101904.2	96636	TGAAGGAAACCACGACAGATAGTAACAAGAAGATGACAGTTGCCAGGCAT	96685

FP236246.1	42636	GGAATTTCTGACTCAAAAGACATATCTAATAAAATGAAGTCATGTTATAT	42685
			|||||||||||||||| |||||| |||||||||||||||||||||||| |
FP101904.2	96686	GGAATTTCTGACTCAAGAGACATGTCTAATAAAATGAAGTCATGTTATTT	96735

FP236246.1	42686	CTGGAGTTCCCACTGTGGTACGGTGGGTTAGGAACCTCACCTCAGTGGCT	42735
			| ||||||||||||||||||| |||| ||||||| ||||| |||||| ||
FP101904.2	96736	CAGGAGTTCCCACTGTGGTACAGTGG-TTAGGAATCTCACTTCAGTGACT	96784

FP236246.1	42736	CGTGTTGCAGTGGAGGTGTGGGTTCGAGCTCTGGCTGGACACAGTGAGTT	42785
			|||||||||||||| ||||||||||  |||||||||||||||||||  ||
FP101904.2	96785	CGTGTTGCAGTGGAAGTGTGGGTTCATGCTCTGGCTGGACACAGTGCCTT	96834

FP236246.1	42786	AAAGGATGTGGCGTTGCCCCAGCAGTAGCATCGGTTGCAGCTGTGGATCA	42835
			 ||||||||||| |||||||||||||||  |||||||||||||||| |||
FP101904.2	96835	GAAGGATGTGGCATTGCCCCAGCAGTAGTGTCGGTTGCAGCTGTGGCTCA	96884

FP236246.1	42836	GATTCAGTCACTGGACCTGGAACTTCCACATGCCGTGGGTGCCACCATAA	42885
			||| ||||||| || ||||||||||||||||||||||||  | |||| ||
FP101904.2	96885	GATACAGTCACCGGCCCTGGAACTTCCACATGCCGTGGGCACGACCACAA	96934

FP236246.1	42886	A-GAAAAAAAAAATGACAACAATTGCTATCTTGGTCATGGATCAAAGTTA	42934
			| ||||||||         |||||||||||||||| |||| ||| |||||
FP101904.2	96935	ACGAAAAAAA---------CAATTGCTATCTTGGTAATGGGTCACAGTTA	96975

FP236246.1	42935	AATCTCTCAGTTTGGCAAATGCTTCTGACGATGCCAGGTTAAACAAGCTG	42984
			 ||||||| |||||||||| ||||||||||||||||| |||||||||  |
FP101904.2	96976	CATCTCTCGGTTTGGCAAACGCTTCTGACGATGCCAGATTAAACAAGTGG	97025

FP236246.1	42985	TCTTCCAGTGAAAGCATTACTTTTGTAGTTCGTGTGAAACACA--CATGT	43032
			|||||||| |||||||||||||| | |||| ||||||||||||  |||  
FP101904.2	97026	TCTTCCAGGGAAAGCATTACTTTCGAAGTTTGTGTGAAACACATGCAT--	97073

FP236246.1	43033	CACTCCCGAAAA--CCTCATTTTAGAAGATGCCACAGTGCCTGAGCAAGT	43080
			| ||||||||||  |||  ||| |||||||||||||||||||||||||||
FP101904.2	97074	CGCTCCCGAAAAAGCCT--TTTCAGAAGATGCCACAGTGCCTGAGCAAGT	97121

FP236246.1	43081	GGATGACGTATGTCTGGGTACTGGCTTTTGCAAGTGTGATGGTGTCTAAT	43130
			|||||||||| |||||||||||||||||||||||||||||||||||||||
FP101904.2	97122	GGATGACGTACGTCTGGGTACTGGCTTTTGCAAGTGTGATGGTGTCTAAT	97171

FP236246.1	43131	GCTTTGCATGTAACAAAACGATGCTAAACTTAATGTAGTTGTCAAGAGGG	43180
			||||||||||| ||||| ||||||||||||||||||||||||||||||||
FP101904.2	97172	GCTTTGCATGTCACAAAGCGATGCTAAACTTAATGTAGTTGTCAAGAGGG	97221

FP236246.1	43181	CTTTCAAAATTACCTCTGAAGGTGTCATCTCCTGCAGAAAGGCAAAGACC	43230
			||||| ||||| |||||||||||||| |||||||||||||||||||||||
FP101904.2	97222	CTTTCCAAATTGCCTCTGAAGGTGTCGTCTCCTGCAGAAAGGCAAAGACC	97271

FP236246.1	43231	TGAGCAACAAGGCTCTAATCCTATGCTTTCCATTCTTGTCAACTGACATG	43280
			|| || ||||||||||||||||||||||||||||||||||||||||||||
FP101904.2	97272	TGGGCGACAAGGCTCTAATCCTATGCTTTCCATTCTTGTCAACTGACATG	97321

FP236246.1	43281	GTCGTAAGGACGTTCTCAGCGACAGATCTTTTTTAATACTCCAAGCGCAA	43330
			|||||||||||||||||||| ||||||| |||||| || || ||||  | 
FP101904.2	97322	GTCGTAAGGACGTTCTCAGCAACAGATCATTTTTA-TAATCAAAGCTTAG	97370

FP236246.1	43331	AGAAATGGAATCAAATC-GATGTTGAGACTGACTTGTGCATTTCAGGGAA	43379
			||||||||||| ||||| |||||| | ||| |||| ||  ||||| ||||
FP101904.2	97371	AGAAATGGAAT-AAATCTGATGTTAACACTTACTTATGTTTTTCAAGGAA	97419

FP236246.1	43380	ATACAATTTTCAAAAATGCGTTGGTGGAGGGAAACGAATGGCACGATTGA	43429
			||| | | ||||| |||| | |||||    |||| ||||| || ||||| 
FP101904.2	97420	ATATA-TATTCAAGAATGAGCTGGTGTTATGAAATGAATG-CATGATTGT	97467

FP236246.1	43430	ATGAGCAAAGTGCCAGAAAGCCATGCTCTTGTTTTATCTCTTTTCTTTTA	43479
			||||||||| ||  ||||  ||||||||||||||| ||||||||||||||
FP101904.2	97468	ATGAGCAAA-TGTTAGAATTCCATGCTCTTGTTTTCTCTCTTTTCTTTTA	97516

FP236246.1	43480	TGTGACTCGATGCTTTCTTGGGAGTTCCCGTCATGGCTCAGTGGAAGTGA	43529
			|||| |   | | ||||||| |||| || ||||||||||||||||||  |
FP101904.2	97517	TGTGCCCAAAGGGTTTCTTGAGAGTACCTGTCATGGCTCAGTGGAAGCCA	97566

FP236246.1	43530	ATCTGACTAGTATCCAGGAGGA	43551
			 |   ||||||| ||| |||||
FP101904.2	97567	GTGCAACTAGTACCCATGAGGA	97588

Overview

Query
FP236246.1 - 45991 bps
Hit
FP101904.2 - 98057 bps
Total alignments
21
Best alignment
alignment #1 (HSP: 2330 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
185.56136523304122243551195269975881
293.6155717012305610067159061660811
388.89526677312028628016-182745904921
489.33444957083328138988-176623823861
597.55409442333314937381-185844900771
696.94397043832117225554193213975631
797.36386240093314937157-182387863941
886.87317747882084725634-177570823651
996.73313532692485328121193208964751
1089.16296343082370928016-186426907561
1188.45295044242028624709-182387868091
1288.81254137323362937360193216969231
1389.34252035953749441088183722873501
1493.84245129153034133255149198521181
1589.25241434822453528016-178869823651
1689.89237033453749440838187403907521
1799.68218522183748539702-193208954241
1898.98217022573450836764-190859931071
1990.94187025194118943707-185034875831
2089.71178525273749440020179846823621
2191.38174723154118943503-177673800261
Short-link