<=>End overlap alignment

Alignment #1 HSP: 639 bps / non-identical: 589 bps

Full alignment

C  FP085360.1	73888	TTGGCCTTAAGTGTTTTTCTAGGACTTTTATACTTTGGGGTCTTATTTTT	73839
			||||||||||||||||||||||||||||||||||||||| ||||||||||
  FP085609.1	1	TTGGCCTTAAGTGTTTTTCTAGGACTTTTATACTTTGGGATCTTATTTTT	50

C  FP085360.1	73838	GAATCTTTCTTCCATTTTGGGTATATTTGACTGTATGGTATAAGATAAGG	73789
			|||||||||||||||||||||||||| |||||||||||||||||||||||
  FP085609.1	51	GAATCTTTCTTCCATTTTGGGTATATCTGACTGTATGGTATAAGATAAGG	100

C  FP085360.1	73788	GTCAATTTCATTCTTTTGAATGTGAATATTCAGTTTTCCAGACAAAATTT	73739
			||||||||||||||||||||||||||||||||||||||||| ||||||||
  FP085609.1	101	GTCAATTTCATTCTTTTGAATGTGAATATTCAGTTTTCCAGGCAAAATTT	150

C  FP085360.1	73738	GTTGAAAAGAGTATTCCTTCTTCATTGTGCATTCTTGACACCCTTAACAA	73689
			|||||||||||||||| |||||||||||||||||||||||||||||||||
  FP085609.1	151	GTTGAAAAGAGTATTCTTTCTTCATTGTGCATTCTTGACACCCTTAACAA	200

C  FP085360.1	73688	AGATCAGTTGATCACATATTTGTATATTTTGAAAGGGGGAATCTCTATTC	73639
			|||||||||||| |||||| ||||||||||||||||||||||||||||||
  FP085609.1	201	AGATCAGTTGATTACATATGTGTATATTTTGAAAGGGGGAATCTCTATTC	250

C  FP085360.1	73638	TGTCCCATAAGTTTACATGTCTATCTTTATGCCAGTACAGTACTATTTGA	73589
			||| |||||||||||||||||||||||||||||||| ||||||| |||||
  FP085609.1	251	TGTTCCATAAGTTTACATGTCTATCTTTATGCCAGTGCAGTACTGTTTGA	300

C  FP085360.1	73588	TTAGTGTGCATTTATATTATATTTTGGAATCAGAAAAGGTGATGTTTCCA	73539
			||||||||||||||||||||||||||||||||||||||||||||||||||
  FP085609.1	301	TTAGTGTGCATTTATATTATATTTTGGAATCAGAAAAGGTGATGTTTCCA	350

C  FP085360.1	73538	GCTGCATTCTTTCTCAAAATTGATTAGCCATTTATGGTCTTCTGAAATTC	73489
			||||||||||||||||||||||||||||||| ||||||||||||||||||
  FP085609.1	351	GCTGCATTCTTTCTCAAAATTGATTAGCCATCTATGGTCTTCTGAAATTC	400

C  FP085360.1	73488	CACATAAATGTTAGTTTTTTTTCTATTTCTGTGAAGAAATGCTGTTGGGA	73439
			|| |||||||||||||||||||||||||||||||||||||||||||||||
  FP085609.1	401	CATATAAATGTTAGTTTTTTTTCTATTTCTGTGAAGAAATGCTGTTGGGA	450

C  FP085360.1	73438	GTTTGGTAGGGAATGTATTGAATAGGCAGATTGCTGTGCTTAACACAGAC	73389
			||||||||||||||||||||||||||||||||||||||| ||||| ||||
  FP085609.1	451	GTTTGGTAGGGAATGTATTGAATAGGCAGATTGCTGTGCATAACATAGAC	500

C  FP085360.1	73388	ATTTTAACAATACTGAGTTTTTAAATCAATGAACATGGAATAACATTCCA	73339
			||||||||||||||||||||||||||| |||||||||| |||||||||||
  FP085609.1	501	ATTTTAACAATACTGAGTTTTTAAATCGATGAACATGGGATAACATTCCA	550

C  FP085360.1	73338	TTTGCTGGTCTTCCTTAATTTTTGTCATCAATGTTTTGTAGTTGTCGGTA	73289
			|||||| ||||||||||||||||||||| ||||||||||||||||| |||
  FP085609.1	551	TTTGCTTGTCTTCCTTAATTTTTGTCATAAATGTTTTGTAGTTGTCAGTA	600

C  FP085360.1	73288	TGCAAGTCTTTCACTCATAGGTTTATTCCTAAATATTAT	73250
			| |||||||||||||| ||||||||||||||||||||||
  FP085609.1	601	TACAAGTCTTTCACTCTTAGGTTTATTCCTAAATATTAT	639

Compact alignment

C  FP085360.1	73888	TTGGCCTTAAGTGTTTTTCTAGGACTTTTATACTTTGGGGTCTTATTTTT	73839
			||||||||||||||||||||||||||||||||||||||| ||||||||||
  FP085609.1	1	TTGGCCTTAAGTGTTTTTCTAGGACTTTTATACTTTGGGATCTTATTTTT	50

C  FP085360.1	73838	GAATCTTTCTTCCATTTTGGGTATATTTGACTGTATGGTATAAGATAAGG	73789
			|||||||||||||||||||||||||| |||||||||||||||||||||||
  FP085609.1	51	GAATCTTTCTTCCATTTTGGGTATATCTGACTGTATGGTATAAGATAAGG	100

C  FP085360.1	73788	GTCAATTTCATTCTTTTGAATGTGAATATTCAGTTTTCCAGACAAAATTT	73739
			||||||||||||||||||||||||||||||||||||||||| ||||||||
  FP085609.1	101	GTCAATTTCATTCTTTTGAATGTGAATATTCAGTTTTCCAGGCAAAATTT	150

C  FP085360.1	73738	GTTGAAAAGAGTATTCCTTCTTCATTGTGCATTCTTGACACCCTTAACAA	73689
			|||||||||||||||| |||||||||||||||||||||||||||||||||
  FP085609.1	151	GTTGAAAAGAGTATTCTTTCTTCATTGTGCATTCTTGACACCCTTAACAA	200

C  FP085360.1	73688	AGATCAGTTGATCACATATTTGTATATTTTGAAAGGGGGAATCTCTATTC	73639
			|||||||||||| |||||| ||||||||||||||||||||||||||||||
  FP085609.1	201	AGATCAGTTGATTACATATGTGTATATTTTGAAAGGGGGAATCTCTATTC	250

C  FP085360.1	73638	TGTCCCATAAGTTTACATGTCTATCTTTATGCCAGTACAGTACTATTTGA	73589
			||| |||||||||||||||||||||||||||||||| ||||||| |||||
  FP085609.1	251	TGTTCCATAAGTTTACATGTCTATCTTTATGCCAGTGCAGTACTGTTTGA	300

skip 50 bps 100% identity alignment

C  FP085360.1	73538	GCTGCATTCTTTCTCAAAATTGATTAGCCATTTATGGTCTTCTGAAATTC	73489
			||||||||||||||||||||||||||||||| ||||||||||||||||||
  FP085609.1	351	GCTGCATTCTTTCTCAAAATTGATTAGCCATCTATGGTCTTCTGAAATTC	400

C  FP085360.1	73488	CACATAAATGTTAGTTTTTTTTCTATTTCTGTGAAGAAATGCTGTTGGGA	73439
			|| |||||||||||||||||||||||||||||||||||||||||||||||
  FP085609.1	401	CATATAAATGTTAGTTTTTTTTCTATTTCTGTGAAGAAATGCTGTTGGGA	450

C  FP085360.1	73438	GTTTGGTAGGGAATGTATTGAATAGGCAGATTGCTGTGCTTAACACAGAC	73389
			||||||||||||||||||||||||||||||||||||||| ||||| ||||
  FP085609.1	451	GTTTGGTAGGGAATGTATTGAATAGGCAGATTGCTGTGCATAACATAGAC	500

C  FP085360.1	73388	ATTTTAACAATACTGAGTTTTTAAATCAATGAACATGGAATAACATTCCA	73339
			||||||||||||||||||||||||||| |||||||||| |||||||||||
  FP085609.1	501	ATTTTAACAATACTGAGTTTTTAAATCGATGAACATGGGATAACATTCCA	550

C  FP085360.1	73338	TTTGCTGGTCTTCCTTAATTTTTGTCATCAATGTTTTGTAGTTGTCGGTA	73289
			|||||| ||||||||||||||||||||| ||||||||||||||||| |||
  FP085609.1	551	TTTGCTTGTCTTCCTTAATTTTTGTCATAAATGTTTTGTAGTTGTCAGTA	600

C  FP085360.1	73288	TGCAAGTCTTTCACTCATAGGTTTATTCCTAAATATTAT	73250
			| |||||||||||||| ||||||||||||||||||||||
  FP085609.1	601	TACAAGTCTTTCACTCTTAGGTTTATTCCTAAATATTAT	639

Overview

Query
FP085360.1 - 133685 bps
Hit
FP085609.1 - 110840 bps
Total alignments
21
Best alignment
alignment #1 (HSP: 639 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
196.875366397325073888-116391
295.342954834099134099-140026743341
397.2210789121966106073255-1976131691
496.87578766324426650897-112609192181
590.68565873825273260113-132489400261
695.57268430943787140964-120206232761
788.04263939583378837745-120259241771
890.04246630943787140964-124205272051
983.96245239583378837745-124258281081
1094.41228027704062143390-121409241781
1192.0121932857130829133685-153114559421
1292.13211628133408336895-129678324871
1388.43207627704062143390-125406281091
1488.55148721843787540058-129678318941
1594.0414051722126305128026144770464981
1682.69128724624092943390-129999324871
1792.71116214623950340964-128136295771
1885.91109315093623737745-128189296781
1992.3593911763295734132-124191253941
2092.0493111763295734132-120192213971
2191.6692711763295734132-128122293321
Short-link