<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 0 bps

Full alignment

CU210868.10	1	TAGCTTTCTCAAGGACTTAAATGCAATTCTAGGTAAAAAGCTAAAGTAAT	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116458	TAGCTTTCTCAAGGACTTAAATGCAATTCTAGGTAAAAAGCTAAAGTAAT	116507

CU210868.10	51	GAAACTCAAAACGGATTTCTGAGTAAACACCATCTCCTGGCGAACAGTGT	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116508	GAAACTCAAAACGGATTTCTGAGTAAACACCATCTCCTGGCGAACAGTGT	116557

CU210868.10	101	CAGGTTGACAGCGCTTTTCACATTTGCAAATTTATATGTATGGGTTGAAA	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116558	CAGGTTGACAGCGCTTTTCACATTTGCAAATTTATATGTATGGGTTGAAA	116607

CU210868.10	151	AAAAATTAAAAATTTCTATCGAGACATTTTTTTTTTTTTTTTTTTTTTGT	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116608	AAAAATTAAAAATTTCTATCGAGACATTTTTTTTTTTTTTTTTTTTTTGT	116657

CU210868.10	201	TAACTATAGCTATATGTTCAACAAAAATGCTGGATTCTACCTTTCCAAGC	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116658	TAACTATAGCTATATGTTCAACAAAAATGCTGGATTCTACCTTTCCAAGC	116707

CU210868.10	251	ATTGGAGGGAAAAGTGACTCTGGCAAGGCGGAGCTGCGCTCAGGGAACGC	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116708	ATTGGAGGGAAAAGTGACTCTGGCAAGGCGGAGCTGCGCTCAGGGAACGC	116757

CU210868.10	301	CTAAGGCAACATTTGCACCTGCCTTGAGCCTGCAGCGGTCGCCACAGCAG	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116758	CTAAGGCAACATTTGCACCTGCCTTGAGCCTGCAGCGGTCGCCACAGCAG	116807

CU210868.10	351	TGCTATAGGAAATGCTTCAAAAAATTTTTTTTTTTCTTTTCTGAATAGCA	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116808	TGCTATAGGAAATGCTTCAAAAAATTTTTTTTTTTCTTTTCTGAATAGCA	116857

CU210868.10	401	GCTTTACAATGTTCTACAGCGAAACCGTCGTTTTACATATTCCGAAATTC	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116858	GCTTTACAATGTTCTACAGCGAAACCGTCGTTTTACATATTCCGAAATTC	116907

CU210868.10	451	TTTTCCTCCTGGTTTGTCAAGGGTAAACTGGAGATTCTTTTACCTCACAA	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116908	TTTTCCTCCTGGTTTGTCAAGGGTAAACTGGAGATTCTTTTACCTCACAA	116957

CU210868.10	501	AGGCTATGGGGAGAAATACGAAATTGAAAAGTCACTATGGAGACCACCTC	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	116958	AGGCTATGGGGAGAAATACGAAATTGAAAAGTCACTATGGAGACCACCTC	117007

CU210868.10	551	CGGGCAAGATGAAGGAGGAACACTGGAAGTGGAGCGCCTGAACACACGGC	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117008	CGGGCAAGATGAAGGAGGAACACTGGAAGTGGAGCGCCTGAACACACGGC	117057

CU210868.10	601	GAGACTCTGAAAGCTATTAACATTGTTTGGGCGGTTAGGGCGGTTGGCGG	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117058	GAGACTCTGAAAGCTATTAACATTGTTTGGGCGGTTAGGGCGGTTGGCGG	117107

CU210868.10	651	CAACTCGCCGGAGGGCGGCAGTTGCGTGGCACCCCGAAGCGTGCCTAGGC	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117108	CAACTCGCCGGAGGGCGGCAGTTGCGTGGCACCCCGAAGCGTGCCTAGGC	117157

CU210868.10	701	GCACGCTCCCCTCCGCTCCTCCACTCAGAGAGCAAAGTGGGGGCGGAGGG	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117158	GCACGCTCCCCTCCGCTCCTCCACTCAGAGAGCAAAGTGGGGGCGGAGGG	117207

CU210868.10	751	GGAGGGGGAAGAACGCGAAGGGCGGTGGAACTACAACTCCCGCAAGGCCT	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117208	GGAGGGGGAAGAACGCGAAGGGCGGTGGAACTACAACTCCCGCAAGGCCT	117257

CU210868.10	801	TGCGCGTCCAGGGTGCTTTACAATAGAAGCTCGGTTGGCGAGGTCTGCGG	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117258	TGCGCGTCCAGGGTGCTTTACAATAGAAGCTCGGTTGGCGAGGTCTGCGG	117307

CU210868.10	851	AGAGGTGTCGGAACTGCCGTTTCCGGCATGTTCAGGTCTACGAGAACGAC	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117308	AGAGGTGTCGGAACTGCCGTTTCCGGCATGTTCAGGTCTACGAGAACGAC	117357

CU210868.10	901	CGATCAGTGGAGGGTGGGGGAGAGACTCCAATGCCCAGCGGGCCATGCGC	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117358	CGATCAGTGGAGGGTGGGGGAGAGACTCCAATGCCCAGCGGGCCATGCGC	117407

CU210868.10	951	GGGCAGCGCTTGCGCGAACCGCGGACGGGGGGGCGGTCGGGCCATTTAAA	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117408	GGGCAGCGCTTGCGCGAACCGCGGACGGGGGGGCGGTCGGGCCATTTAAA	117457

CU210868.10	1001	TGTGTGTTTGTGGGTGAAATGGCTGCGCAGGTCGGAGCGGTTCGCGTAGT	1050
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117458	TGTGTGTTTGTGGGTGAAATGGCTGCGCAGGTCGGAGCGGTTCGCGTAGT	117507

CU210868.10	1051	ACGGGCGGTGGCGGCGCAGGAGGAGCCGGACAAAGAAGGGAAGGAGAAAC	1100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117508	ACGGGCGGTGGCGGCGCAGGAGGAGCCGGACAAAGAAGGGAAGGAGAAAC	117557

CU210868.10	1101	CCCATGTTGGGGTTTCGCCGCGGGGAGTGAAGCGGCAGCGCCGGGCGAGC	1150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117558	CCCATGTTGGGGTTTCGCCGCGGGGAGTGAAGCGGCAGCGCCGGGCGAGC	117607

CU210868.10	1151	AGCGGGGGTTCTCAGGAGAAGCGGGGGCGGCCGAGCCAGGACCCCCCTCT	1200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117608	AGCGGGGGTTCTCAGGAGAAGCGGGGGCGGCCGAGCCAGGACCCCCCTCT	117657

CU210868.10	1201	CGCTCCCCCTCATCGGCGGCGTCGTAGCCGCCAACATCCCGGGCCGCTGC	1250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117658	CGCTCCCCCTCATCGGCGGCGTCGTAGCCGCCAACATCCCGGGCCGCTGC	117707

CU210868.10	1251	CTCCAACGAATGCCGCCCCAACCGTCCCGGGCCCTGTTGAACCTCTGCTC	1300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117708	CTCCAACGAATGCCGCCCCAACCGTCCCGGGCCCTGTTGAACCTCTGCTC	117757

CU210868.10	1301	CTGCCGCCTCCGCCGCCACCGTCGCTGGCACCCGCCGGGCCCACTGTCGC	1350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117758	CTGCCGCCTCCGCCGCCACCGTCGCTGGCACCCGCCGGGCCCACTGTCGC	117807

CU210868.10	1351	TGCCCCGCTCCCGGCCCCGGGCACCTCGGCCCTCTTCACCTTCTCGCCTC	1400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117808	TGCCCCGCTCCCGGCCCCGGGCACCTCGGCCCTCTTCACCTTCTCGCCTC	117857

CU210868.10	1401	TGACGGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAAGGAGCGGCAC	1450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117858	TGACGGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAAGGAGCGGCAC	117907

CU210868.10	1451	AAGCACCATCACCACCGCGGCTCCGATGGTGACCCCGGCGCCTGCGTTCC	1500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117908	AAGCACCATCACCACCGCGGCTCCGATGGTGACCCCGGCGCCTGCGTTCC	117957

CU210868.10	1501	GGGCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAAAGGAGCGGAG	1550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	117958	GGGCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAAAGGAGCGGAG	118007

CU210868.10	1551	GGGTGCCTCTGATCAAGGCCCCCAAGAGAGGTGAGAGCAGGCGAACCGCT	1600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118008	GGGTGCCTCTGATCAAGGCCCCCAAGAGAGGTGAGAGCAGGCGAACCGCT	118057

CU210868.10	1601	GGGGCTCGGGCTGTAGGTCTCAGTGCCCATATCCCGCCCCTTTAGGACTG	1650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118058	GGGGCTCGGGCTGTAGGTCTCAGTGCCCATATCCCGCCCCTTTAGGACTG	118107

CU210868.10	1651	AAAGACGCCGCTCTACTCCCCTGAGCCCACTGGAGTGGACTCGGGATTGC	1700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118108	AAAGACGCCGCTCTACTCCCCTGAGCCCACTGGAGTGGACTCGGGATTGC	118157

CU210868.10	1701	AGGCGGTTGCCACAGTTTGACCTACTTGAGGCTTCTCTCTGAGGCCGAGC	1750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118158	AGGCGGTTGCCACAGTTTGACCTACTTGAGGCTTCTCTCTGAGGCCGAGC	118207

CU210868.10	1751	TGTCAGTTTCCATCCCTGTTTGCAGTTCCCCCGGAGCCTTTGCAACATTT	1800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118208	TGTCAGTTTCCATCCCTGTTTGCAGTTCCCCCGGAGCCTTTGCAACATTT	118257

CU210868.10	1801	ATTTTCAAATTCGGCAGGGTTTCCGCGCCGCGCAGTGCTTGGCATCGGAT	1850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118258	ATTTTCAAATTCGGCAGGGTTTCCGCGCCGCGCAGTGCTTGGCATCGGAT	118307

CU210868.10	1851	TAGTAGGTGGGGTACTAAAACCTCCCTTTCTGAAGTAAAGGCTTGTCACT	1900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118308	TAGTAGGTGGGGTACTAAAACCTCCCTTTCTGAAGTAAAGGCTTGTCACT	118357

CU210868.10	1901	GAAAGTCCCTTCTTGTTCTCTTGCTTGGAAATCTTTAGTTTTTCTCATTC	1950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118358	GAAAGTCCCTTCTTGTTCTCTTGCTTGGAAATCTTTAGTTTTTCTCATTC	118407

CU210868.10	1951	CTGGCACCAGCATATTTACAGGTTTGACTCTGGGCTCTGAGTTTGAATTC	2000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CU210953.7	118408	CTGGCACCAGCATATTTACAGGTTTGACTCTGGGCTCTGAGTTTGAATTC	118457

Overview

Query
CU210868.10 - 142875 bps
Hit
CU210953.7 - 118457 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

Short-link