<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 0 bps

Full alignment

CR847863.2	1	GGCCACAAACTCCTATTTTCTCCCCTCTTGTACAATCAACTTCGCAAACC	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	42784	GGCCACAAACTCCTATTTTCTCCCCTCTTGTACAATCAACTTCGCAAACC	42833

CR847863.2	51	ATTCTCTCCAGAGTCGTTCAAGTCTCCTCTCTCAAGTCAGACTTCCCCCA	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	42834	ATTCTCTCCAGAGTCGTTCAAGTCTCCTCTCTCAAGTCAGACTTCCCCCA	42883

CR847863.2	101	AGTCCTTCTTTCAGGCAATACTCAGCCTTCTCCTTCTAAAAGCCCAACTC	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	42884	AGTCCTTCTTTCAGGCAATACTCAGCCTTCTCCTTCTAAAAGCCCAACTC	42933

CR847863.2	151	TCTCCAGCCCCTCTGGAAAGGAAGACTGTGGCCCGCTGTGGGGAGCCGAG	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	42934	TCTCCAGCCCCTCTGGAAAGGAAGACTGTGGCCCGCTGTGGGGAGCCGAG	42983

CR847863.2	201	TGGCTAGCGGAGAACTGTGGCATCCCAGGCCCACCGTCTTCACCAGTAGC	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	42984	TGGCTAGCGGAGAACTGTGGCATCCCAGGCCCACCGTCTTCACCAGTAGC	43033

CR847863.2	251	AGCCCGCTTTCCCCCAAAGCTCTGACTTCCGGGTAGGCGGGAAAGCCGGG	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43034	AGCCCGCTTTCCCCCAAAGCTCTGACTTCCGGGTAGGCGGGAAAGCCGGG	43083

CR847863.2	301	ACCAGCGCCCCCTCCCACCCTCACCGATTTGGGTCGTAGCCTCGTGGACC	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43084	ACCAGCGCCCCCTCCCACCCTCACCGATTTGGGTCGTAGCCTCGTGGACC	43133

CR847863.2	351	CAGCCCCTGAGAAGGCTGCTGGTTAAGCCTGCGGATATGATGGGTCACAG	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43134	CAGCCCCTGAGAAGGCTGCTGGTTAAGCCTGCGGATATGATGGGTCACAG	43183

CR847863.2	401	ACTCCCCGTCCGAGGTGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCG	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43184	ACTCCCCGTCCGAGGTGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCG	43233

CR847863.2	451	CTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTTGAAGCCCTGCGGGGAG	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43234	CTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTTGAAGCCCTGCGGGGAG	43283

CR847863.2	501	GGGCCGGTGACGCCAGTGCTGGCCAGCTCTCAGGGGCCATAAGACCCTCT	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43284	GGGCCGGTGACGCCAGTGCTGGCCAGCTCTCAGGGGCCATAAGACCCTCT	43333

CR847863.2	551	CCCCCATCGGCCTGACTCCCTTTCATCCCACTCAACTTCTTCCGATGTTC	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43334	CCCCCATCGGCCTGACTCCCTTTCATCCCACTCAACTTCTTCCGATGTTC	43383

CR847863.2	601	AGTCCTCCCAGACACCCTATTTGGGACCCTCCCGGATGTGCGTGGGGGGA	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43384	AGTCCTCCCAGACACCCTATTTGGGACCCTCCCGGATGTGCGTGGGGGGA	43433

CR847863.2	651	GTCACTCCTTCAGGGAGCAGTGGGGACGGCGCCCCGTGCTAGCTGGAGGG	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43434	GTCACTCCTTCAGGGAGCAGTGGGGACGGCGCCCCGTGCTAGCTGGAGGG	43483

CR847863.2	701	ATTCCCCTCCCCCAACTCTCCATCCTTCCCCACCCCTTCCAGATGTAGGG	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43484	ATTCCCCTCCCCCAACTCTCCATCCTTCCCCACCCCTTCCAGATGTAGGG	43533

CR847863.2	751	GGGGTGGGGGATCCCCTCCGCGATAGGCCGCGAGGGTTGACGCGGTCCCA	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43534	GGGGTGGGGGATCCCCTCCGCGATAGGCCGCGAGGGTTGACGCGGTCCCA	43583

CR847863.2	801	CGACCCCCTCCCACGATCCCCAGAGGTGCAGCGGGCACACCCCTCCTTCC	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43584	CGACCCCCTCCCACGATCCCCAGAGGTGCAGCGGGCACACCCCTCCTTCC	43633

CR847863.2	851	AGATGTGCGGAAGCCCGAGCCCCGCCCCCTCCTCCCGCTCCCGCACTGAC	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43634	AGATGTGCGGAAGCCCGAGCCCCGCCCCCTCCTCCCGCTCCCGCACTGAC	43683

CR847863.2	901	CTCTCTTCCGCTCCCGTTTGTCCTGCAACTGCTTCTTCTTCTGCTTCACG	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43684	CTCTCTTCCGCTCCCGTTTGTCCTGCAACTGCTTCTTCTTCTGCTTCACG	43733

CR847863.2	951	CTGAATGGCTTCTTCCTCGGCATGGCCCGGACCAGTCACCTGGCCCGCCC	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43734	CTGAATGGCTTCTTCCTCGGCATGGCCCGGACCAGTCACCTGGCCCGCCC	43783

CR847863.2	1001	TCCGCCGAGCTCCCGCCGCCTCAACTGACTGCCCCCCGGGGCAGCCCCCG	1050
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43784	TCCGCCGAGCTCCCGCCGCCTCAACTGACTGCCCCCCGGGGCAGCCCCCG	43833

CR847863.2	1051	CCGCAGGGGCCCGGGACCCTAGAGGAGGCGGGGCTAGCAGGTGACGTCAG	1100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43834	CCGCAGGGGCCCGGGACCCTAGAGGAGGCGGGGCTAGCAGGTGACGTCAG	43883

CR847863.2	1101	CGGGCGGGCCCGACAGAATTACCGCCGCGGCGGCGATGGAAGGCGGACGG	1150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43884	CGGGCGGGCCCGACAGAATTACCGCCGCGGCGGCGATGGAAGGCGGACGG	43933

CR847863.2	1151	GGGAGATATAGTCACTTCCCTCCAGGAGCGAGGCGAGAGGATGATGCGGG	1200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43934	GGGAGATATAGTCACTTCCCTCCAGGAGCGAGGCGAGAGGATGATGCGGG	43983

CR847863.2	1201	GTGGGCTACTGGCACGTGAGAGCCAGTGGCACCGAGAGGGCGCCCCGGCG	1250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	43984	GTGGGCTACTGGCACGTGAGAGCCAGTGGCACCGAGAGGGCGCCCCGGCG	44033

CR847863.2	1251	GCGAGGAAGGAGGCGCGCGTGGGAGGACCAGGCTAACTCCGTCACGGACG	1300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44034	GCGAGGAAGGAGGCGCGCGTGGGAGGACCAGGCTAACTCCGTCACGGACG	44083

CR847863.2	1301	CTACCAACTCGCGTTCGGAGGAGGGGGGGCGCGTGTCATCACTACCTTGC	1350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44084	CTACCAACTCGCGTTCGGAGGAGGGGGGGCGCGTGTCATCACTACCTTGC	44133

CR847863.2	1351	GCTCCCGGGAGAACCTACCACTCACCTGGAGGGGGCGGCGGAGCGGAGGG	1400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44134	GCTCCCGGGAGAACCTACCACTCACCTGGAGGGGGCGGCGGAGCGGAGGG	44183

CR847863.2	1401	CGGGGCCTACTACCTAGGGGAGAGGGGGCGTGGACACGCTGAGGCTATAC	1450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44184	CGGGGCCTACTACCTAGGGGAGAGGGGGCGTGGACACGCTGAGGCTATAC	44233

CR847863.2	1451	TACAAAGCCCCGGGCTTGACCTTAGTGGAAAGCCGAGACTGCGTCCAGGT	1500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44234	TACAAAGCCCCGGGCTTGACCTTAGTGGAAAGCCGAGACTGCGTCCAGGT	44283

CR847863.2	1501	TGCTGGACTACACCGGGGGCACGGTCAGAGGTCTTTAGGGGAGGGCGGCG	1550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44284	TGCTGGACTACACCGGGGGCACGGTCAGAGGTCTTTAGGGGAGGGCGGCG	44333

CR847863.2	1551	GTCTGAGAGTCCTGGGTGCCGACCTGTTGGGACCCAAATTCCTTGTGGGA	1600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44334	GTCTGAGAGTCCTGGGTGCCGACCTGTTGGGACCCAAATTCCTTGTGGGA	44383

CR847863.2	1601	ACGATGATAAGGAGCAGGTTTACAGATCATAAGTGCAAAAGCGGGCGAGA	1650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44384	ACGATGATAAGGAGCAGGTTTACAGATCATAAGTGCAAAAGCGGGCGAGA	44433

CR847863.2	1651	AGGGAAACCCAAGCGGGACAAGGACTTTTGGGGGGAGGTCAAAGGGCACG	1700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44434	AGGGAAACCCAAGCGGGACAAGGACTTTTGGGGGGAGGTCAAAGGGCACG	44483

CR847863.2	1701	AAGTTGTGCCTGCAGCTGTTACCATAGTAACCGAGGACCGGATGTGGCGA	1750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44484	AAGTTGTGCCTGCAGCTGTTACCATAGTAACCGAGGACCGGATGTGGCGA	44533

CR847863.2	1751	TCTTACGGTGCGACAGTCCTCTTCTCAGGCCCTCTGGCCCGAGAGCCTGT	1800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44534	TCTTACGGTGCGACAGTCCTCTTCTCAGGCCCTCTGGCCCGAGAGCCTGT	44583

CR847863.2	1801	TGACTCTGTGACACACTCTGAGGAGCTGGTTGTGGTGTTTTCCAGCGAGG	1850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44584	TGACTCTGTGACACACTCTGAGGAGCTGGTTGTGGTGTTTTCCAGCGAGG	44633

CR847863.2	1851	GAAGAAAAGAGTAATTTTTTCAAAGCATTTATAGAAACGCAGCAAAGGGA	1900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44634	GAAGAAAAGAGTAATTTTTTCAAAGCATTTATAGAAACGCAGCAAAGGGA	44683

CR847863.2	1901	AGGTGTGAGGTTGCCGCCATGCCTGGCAGAGACGGAGGGAGGCAGTTGGC	1950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44684	AGGTGTGAGGTTGCCGCCATGCCTGGCAGAGACGGAGGGAGGCAGTTGGC	44733

CR847863.2	1951	TCCGGAATGCGGCCGCCGCAGATGTTCTCCGCAACCTTCCGGAAGTGGAA	2000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR936927.1	44734	TCCGGAATGCGGCCGCCGCAGATGTTCTCCGCAACCTTCCGGAAGTGGAA	44783

Overview

Query
CR847863.2 - 22044 bps
Hit
CR936927.1 - 44783 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

Short-link