<=>End overlap alignment

Alignment #1 HSP: 1000 bps / non-identical: 0 bps

Full alignment

CT009517.12	1	GTGAAACTTAAGAGCTTTGTGAGTCCTGTTGTAATGCTTTTAGATGCATT	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	85855	GTGAAACTTAAGAGCTTTGTGAGTCCTGTTGTAATGCTTTTAGATGCATT	85904

CT009517.12	51	TATATACCAACAGGCCAAAGTCACATTTTTTACCGATTAGATTCCTGATC	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	85905	TATATACCAACAGGCCAAAGTCACATTTTTTACCGATTAGATTCCTGATC	85954

CT009517.12	101	ATTCAGGGGTTACCAAGGTTATGCTACCCACTATAGTTAATAAACAAAAA	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	85955	ATTCAGGGGTTACCAAGGTTATGCTACCCACTATAGTTAATAAACAAAAA	86004

CT009517.12	151	GCAAACTGGTCTCTATTCTATCTCATGCACTCAGGCACAACTTTTCCAGA	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86005	GCAAACTGGTCTCTATTCTATCTCATGCACTCAGGCACAACTTTTCCAGA	86054

CT009517.12	201	TTTAAGGGGGAAAAAAAACCCTGTCTTTACACCTACAATCCCAGGGCGAG	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86055	TTTAAGGGGGAAAAAAAACCCTGTCTTTACACCTACAATCCCAGGGCGAG	86104

CT009517.12	251	CTCACTCTCTGGCAACAAGCTCCCTGGGGTGATTTTTCTTCTAGAAGAGT	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86105	CTCACTCTCTGGCAACAAGCTCCCTGGGGTGATTTTTCTTCTAGAAGAGT	86154

CT009517.12	301	ACAGGAGGACAGGCAAGGAGTGGGAGGCAGGGAGTCCAGTTCAGGGACAG	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86155	ACAGGAGGACAGGCAAGGAGTGGGAGGCAGGGAGTCCAGTTCAGGGACAG	86204

CT009517.12	351	GGATTCCGGGATGAAAAGTGAAGGGAGAGGGCCAGGGACCTTGCCGAGGG	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86205	GGATTCCGGGATGAAAAGTGAAGGGAGAGGGCCAGGGACCTTGCCGAGGG	86254

CT009517.12	401	TTTCTCCCTGGTTTCTCAGACAGCTCCTGGGCCAAGACTCAGGGAGACAC	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86255	TTTCTCCCTGGTTTCTCAGACAGCTCCTGGGCCAAGACTCAGGGAGACAC	86304

CT009517.12	451	TGAGACAGAACGCTTGGCACAAGAGTAGCGGGGTCAGGGCGAAGTCCCAG	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86305	TGAGACAGAACGCTTGGCACAAGAGTAGCGGGGTCAGGGCGAAGTCCCAG	86354

CT009517.12	501	GGCCTCAAGCGTGGCTCTCAGGGTCTCAGGCCCCACAGGCGGTGTATGGG	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86355	GGCCTCAAGCGTGGCTCTCAGGGTCTCAGGCCCCACAGGCGGTGTATGGG	86404

CT009517.12	551	TTGGGGAGGCCCCGCGTTGGGGATTCTCTCCTCCTTCTCCTAACCTGTGT	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86405	TTGGGGAGGCCCCGCGTTGGGGATTCTCTCCTCCTTCTCCTAACCTGTGT	86454

CT009517.12	601	CGGGTCCTTCTTCCTGGATACTCACCGGGCGGCCCCAGTTCTCACTCCCA	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86455	CGGGTCCTTCTTCCTGGATACTCACCGGGCGGCCCCAGTTCTCACTCCCA	86504

CT009517.12	651	TTAGGTGACAGGTTTTTAGAGAAGCCAATCAGCGTCGCCGCGGTCCTGGT	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86505	TTAGGTGACAGGTTTTTAGAGAAGCCAATCAGCGTCGCCGCGGTCCTGGT	86554

CT009517.12	701	TCTAAAGTCCTCGCTCACCCACCCGGACTCATTCTCCCCAGACGCCAAGG	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86555	TCTAAAGTCCTCGCTCACCCACCCGGACTCATTCTCCCCAGACGCCAAGG	86604

CT009517.12	751	ATGGTGGTCATGGCGCCCCGAACCCTCTTCCTGCTGCTCTCGGGGGCCCT	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86605	ATGGTGGTCATGGCGCCCCGAACCCTCTTCCTGCTGCTCTCGGGGGCCCT	86654

CT009517.12	801	GACCCTGACCGAGACCTGGGCGGGTGAGTGCGGGGTCAGGAGGGAAACGG	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86655	GACCCTGACCGAGACCTGGGCGGGTGAGTGCGGGGTCAGGAGGGAAACGG	86704

CT009517.12	851	CCCCTGCGCGGAGGAGGGAGGGGCCCGCCTGGCGGGGGCGCAGGACTCGG	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86705	CCCCTGCGCGGAGGAGGGAGGGGCCCGCCTGGCGGGGGCGCAGGACTCGG	86754

CT009517.12	901	CAGCCGCGCCGGGAGGAGGGTCGGGCGGGTCTCAACCCCTCCTCGCCCCC	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86755	CAGCCGCGCCGGGAGGAGGGTCGGGCGGGTCTCAACCCCTCCTCGCCCCC	86804

CT009517.12	951	AGGCTCCCACTCCATGAGGTATTTCAGCGCCGCCGTGTCCCGGCCCGGCC	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR788234.4	86805	AGGCTCCCACTCCATGAGGTATTTCAGCGCCGCCGTGTCCCGGCCCGGCC	86854

Overview

Query
CT009517.12 - 82609 bps
Hit
CR788234.4 - 86854 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 1000 bps)
Best alignment cartoon

Alternate alignments

Short-link