<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 0 bps

Full alignment

CR759793.3	1	CCCGCCAAATCCCCCTCCCCCAGTTCAGCCCCCGGCCGCTCCACTCCCTT	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121400	CCCGCCAAATCCCCCTCCCCCAGTTCAGCCCCCGGCCGCTCCACTCCCTT	121449

CR759793.3	51	TCAGGGACAGGAAGGTACCACAGCTTTCCCCTCAGACTCAGCGCCCAGCT	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121450	TCAGGGACAGGAAGGTACCACAGCTTTCCCCTCAGACTCAGCGCCCAGCT	121499

CR759793.3	101	CTCCCCAATACCTCTCCCTCTATATCCCCGCCCCCGCCTCTGATCCCCGC	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121500	CTCCCCAATACCTCTCCCTCTATATCCCCGCCCCCGCCTCTGATCCCCGC	121549

CR759793.3	151	ACCGTCCGGCCCCCACCTCAGAAACCGTCTCTCGAGGCGACCCTCGCCGC	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121550	ACCGTCCGGCCCCCACCTCAGAAACCGTCTCTCGAGGCGACCCTCGCCGC	121599

CR759793.3	201	AATTCTCAGAACCTCGCATGGTTCCCTCCGCCTTCCTTCCCACTCCCACC	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121600	AATTCTCAGAACCTCGCATGGTTCCCTCCGCCTTCCTTCCCACTCCCACC	121649

CR759793.3	251	GCAGGCCCCACTACGGACCGGAAGTCACAGAGTTTCCGCCTTCATGCAAC	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121650	GCAGGCCCCACTACGGACCGGAAGTCACAGAGTTTCCGCCTTCATGCAAC	121699

CR759793.3	301	TAAGCGCCGCCATATTGTCGTACGGAACACAGGCTTCCTGTGGCCGGAGG	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121700	TAAGCGCCGCCATATTGTCGTACGGAACACAGGCTTCCTGTGGCCGGAGG	121749

CR759793.3	351	TGACAGTAGGCCCGCCCCGCGAACACCTCCAGTGCGGCCCACATAGTCAG	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121750	TGACAGTAGGCCCGCCCCGCGAACACCTCCAGTGCGGCCCACATAGTCAG	121799

CR759793.3	401	CGGTCTCTTCCAGGTCGGAGTTTGTCTCCCCGAACCCAGGCGTCCCAAAG	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121800	CGGTCTCTTCCAGGTCGGAGTTTGTCTCCCCGAACCCAGGCGTCCCAAAG	121849

CR759793.3	451	CAGCTGGGGGCCGCCATTTTGCCGTACGGCACTGGCTACGCCCGGACTCC	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121850	CAGCTGGGGGCCGCCATTTTGCCGTACGGCACTGGCTACGCCCGGACTCC	121899

CR759793.3	501	GGTGCGCAGCCAGTGGAGCTCTTTTCACCCGGTGCTTCTACGACTCCGCC	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121900	GGTGCGCAGCCAGTGGAGCTCTTTTCACCCGGTGCTTCTACGACTCCGCC	121949

CR759793.3	551	AATCAGAAACTTCCTGCCTGGGGCCCAACCGCCGGAGAGTAGCGCGTAGG	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	121950	AATCAGAAACTTCCTGCCTGGGGCCCAACCGCCGGAGAGTAGCGCGTAGG	121999

CR759793.3	601	GAGGACCGAGCCTCGTTTCCAAGGAGGGGCAGGGGAACCGAACAGGGTGG	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122000	GAGGACCGAGCCTCGTTTCCAAGGAGGGGCAGGGGAACCGAACAGGGTGG	122049

CR759793.3	651	ATTAGGAATTGGGCTTTCCAAAGCTGTGCAGAGTTTCAGGGAAGGGCAGA	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122050	ATTAGGAATTGGGCTTTCCAAAGCTGTGCAGAGTTTCAGGGAAGGGCAGA	122099

CR759793.3	701	AGTCTCTTAAAAGGGAAGTAAAACCTTTTCTTTCAGTTGGGCTATTGGCA	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122100	AGTCTCTTAAAAGGGAAGTAAAACCTTTTCTTTCAGTTGGGCTATTGGCA	122149

CR759793.3	751	AGCTATCTGGCCCTGCTTTCCTGTCCCCCAGGTTCCCATTTCCACGGCTT	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122150	AGCTATCTGGCCCTGCTTTCCTGTCCCCCAGGTTCCCATTTCCACGGCTT	122199

CR759793.3	801	ATTCGGCTGACCCAGCCCCTTCCCCTGCAAGGGCGGCGCGCTCCTTGCCG	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122200	ATTCGGCTGACCCAGCCCCTTCCCCTGCAAGGGCGGCGCGCTCCTTGCCG	122249

CR759793.3	851	CTGTCCAGCAGCTGTTTCTACTGCCAGGTGCTGCGTCCCGCGATCGTTAT	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122250	CTGTCCAGCAGCTGTTTCTACTGCCAGGTGCTGCGTCCCGCGATCGTTAT	122299

CR759793.3	901	AACACATGCGTACAAATGAGCACAACGCGCCATAAAAGTGTTATTGTTAT	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122300	AACACATGCGTACAAATGAGCACAACGCGCCATAAAAGTGTTATTGTTAT	122349

CR759793.3	951	TACTATTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACC	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122350	TACTATTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACC	122399

CR759793.3	1001	AGCCAGACCGTTGGGACCTGAATGGTTCTTCTCCAGAGGGGGTCCTCGAA	1050
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122400	AGCCAGACCGTTGGGACCTGAATGGTTCTTCTCCAGAGGGGGTCCTCGAA	122449

CR759793.3	1051	GGGCCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGCCTAGG	1100
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122450	GGGCCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGCCTAGG	122499

CR759793.3	1101	GTCTGCGGATGGGCGATGATGGGGTGGGGCTTGGAGGAGAGTTTGTGCAA	1150
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122500	GTCTGCGGATGGGCGATGATGGGGTGGGGCTTGGAGGAGAGTTTGTGCAA	122549

CR759793.3	1151	ATTGCCGCTGCGAGGGCTGCTGTGAGGCGAAATGAGGCTCATAAAATACT	1200
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122550	ATTGCCGCTGCGAGGGCTGCTGTGAGGCGAAATGAGGCTCATAAAATACT	122599

CR759793.3	1201	TTGGGTCTCCTCCTCCTCCTCTTCGGGGAGAGGGGAAAAAAGAATGAAGG	1250
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122600	TTGGGTCTCCTCCTCCTCCTCTTCGGGGAGAGGGGAAAAAAGAATGAAGG	122649

CR759793.3	1251	ATGAAGAAACAGATTTGATACCCACCTCGTTGTGTTTAGGGAGGCTGGAG	1300
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122650	ATGAAGAAACAGATTTGATACCCACCTCGTTGTGTTTAGGGAGGCTGGAG	122699

CR759793.3	1301	GGACTCGTGGAGGCAAGGCTGGGTCCAGAGGTGAGCTTATGAGGAAACCA	1350
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122700	GGACTCGTGGAGGCAAGGCTGGGTCCAGAGGTGAGCTTATGAGGAAACCA	122749

CR759793.3	1351	GAAAGATTAACAGGGTCCCAATCGCTAAGATTCCCATTTCCACAAGTGGT	1400
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122750	GAAAGATTAACAGGGTCCCAATCGCTAAGATTCCCATTTCCACAAGTGGT	122799

CR759793.3	1401	GGGCATCTTGCCACTTAACTAGGGTCACAGAGCTTATTAGATCCCTAACG	1450
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122800	GGGCATCTTGCCACTTAACTAGGGTCACAGAGCTTATTAGATCCCTAACG	122849

CR759793.3	1451	CTGAGTCCTAGAATCGCAAACACCCGTCCGTTGAACAATCCCACATCACT	1500
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122850	CTGAGTCCTAGAATCGCAAACACCCGTCCGTTGAACAATCCCACATCACT	122899

CR759793.3	1501	TCTCTCCAGTCGTCAAAGTCTACAGCTTTCAAAATGGGGAACATAAAAAC	1550
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122900	TCTCTCCAGTCGTCAAAGTCTACAGCTTTCAAAATGGGGAACATAAAAAC	122949

CR759793.3	1551	TCTCCGCGAGGACTGGGACTTGGAAGATGTAAGGGATTTAATTTCAAGAA	1600
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	122950	TCTCCGCGAGGACTGGGACTTGGAAGATGTAAGGGATTTAATTTCAAGAA	122999

CR759793.3	1601	CCTCAACTTTCCCAAAATTGGTCTTCCTAAGGAAACACCTGCAGTACAGG	1650
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123000	CCTCAACTTTCCCAAAATTGGTCTTCCTAAGGAAACACCTGCAGTACAGG	123049

CR759793.3	1651	TTCTCATTCTTCACTTCTCCTTTTACAATAGAGTCACCCTCTTAAGAAAA	1700
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123050	TTCTCATTCTTCACTTCTCCTTTTACAATAGAGTCACCCTCTTAAGAAAA	123099

CR759793.3	1701	AAAAAAAAAAGAATAGTTCTCTTTTTTCCCCTCCCCCCTCAAAAGTATAG	1750
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123100	AAAAAAAAAAGAATAGTTCTCTTTTTTCCCCTCCCCCCTCAAAAGTATAG	123149

CR759793.3	1751	TTCTCAACCATGAAATCTCCTGGGGGTAATCTTACCTGTTTAAAATAAAG	1800
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123150	TTCTCAACCATGAAATCTCCTGGGGGTAATCTTACCTGTTTAAAATAAAG	123199

CR759793.3	1801	GGAAATGTACCCTGTTTCTTTCACCAAGGCACCATGAATACCACCTTTTC	1850
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123200	GGAAATGTACCCTGTTTCTTTCACCAAGGCACCATGAATACCACCTTTTC	123249

CR759793.3	1851	TTTTTTTTTTTTTTTTTTTTCCTTTCTTTTGTCTTTTTTTTTTTTAAATG	1900
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123250	TTTTTTTTTTTTTTTTTTTTCCTTTCTTTTGTCTTTTTTTTTTTTAAATG	123299

CR759793.3	1901	CAGGGTCGGCCGGGCGCGATGGTTCACGCCTGTAATCCCAGCACTTTGGG	1950
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123300	CAGGGTCGGCCGGGCGCGATGGTTCACGCCTGTAATCCCAGCACTTTGGG	123349

CR759793.3	1951	GGTCCGAGGTGGGCGTATCATGGGGTCAAGAGATCGAGACCATCCTGGCC	2000
			||||||||||||||||||||||||||||||||||||||||||||||||||
CR759786.5	123350	GGTCCGAGGTGGGCGTATCATGGGGTCAAGAGATCGAGACCATCCTGGCC	123399

Overview

Query
CR759793.3 - 69184 bps
Hit
CR759786.5 - 123399 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

Short-link