<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 0 bps

Full alignment

BX649586.4	1	GAATTCATCCGTGCGCGTTTTTCTCTCACCGATTATCTCCCGCAGAACGA	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131411	GAATTCATCCGTGCGCGTTTTTCTCTCACCGATTATCTCCCGCAGAACGA	131460

BX649586.4	51	AACTACGACATTGGTAATAGGGAGTTGTTGGCTGTCAAACTCGCTTTGGA	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131461	AACTACGACATTGGTAATAGGGAGTTGTTGGCTGTCAAACTCGCTTTGGA	131510

BX649586.4	101	GGAGTGGCGTCATTGGTTGGAGGGTTCGGGGGTTCCCTTTATCGTTTGGA	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131511	GGAGTGGCGTCATTGGTTGGAGGGTTCGGGGGTTCCCTTTATCGTTTGGA	131560

BX649586.4	151	CCGATCATAAGAACCTCGAATACATCAGGTCCGCCAAACGACTCAGCTTC	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131561	CCGATCATAAGAACCTCGAATACATCAGGTCCGCCAAACGACTCAGCTTC	131610

BX649586.4	201	AGGCAGGCTCGGTGGGCATTATTTTTCGGACGTTTCGACTTTACCATCTC	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131611	AGGCAGGCTCGGTGGGCATTATTTTTCGGACGTTTCGACTTTACCATCTC	131660

BX649586.4	251	TTATCGGCCGAGTTCCAAAAACATCAAGCCCGACGCGTTATCCCGTCTTT	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131661	TTATCGGCCGAGTTCCAAAAACATCAAGCCCGACGCGTTATCCCGTCTTT	131710

BX649586.4	301	TTGATTCTTCCGAGCGCAATACGTCTCTTGAGCCCATCGTTCCCCAGAGG	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131711	TTGATTCTTCCGAGCGCAATACGTCTCTTGAGCCCATCGTTCCCCAGAGG	131760

BX649586.4	351	ATTTGTATTTCTGCAGTGACATGGGAGATCGAGAGCAGGGTCCGCACAGC	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131761	ATTTGTATTTCTGCAGTGACATGGGAGATCGAGAGCAGGGTCCGCACAGC	131810

BX649586.4	401	CCTGGACGGGGTAACGCCCCCGGTCGGATGCCCACCTAGTCGATTGTTTC	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131811	CCTGGACGGGGTAACGCCCCCGGTCGGATGCCCACCTAGTCGATTGTTTC	131860

BX649586.4	451	TGCCGGAGGGGATTCGGTCTGACGTCATTCGATGGGGACATTCCTCCAAA	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131861	TGCCGGAGGGGATTCGGTCTGACGTCATTCGATGGGGACATTCCTCCAAA	131910

BX649586.4	501	GTGGCTTGTCATCCAGGGGTGAGTCGTACATTATTCTTAGTTAAACAGCG	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131911	GTGGCTTGTCATCCAGGGGTGAGTCGTACATTATTCTTAGTTAAACAGCG	131960

BX649586.4	551	ATTCTGGTGGCCAGCTATGGCACGGGACACACGCGAGTTTGTTTTGGCCT	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	131961	ATTCTGGTGGCCAGCTATGGCACGGGACACACGCGAGTTTGTTTTGGCCT	132010

BX649586.4	601	GTTCCGTTTGTGCTGTTTCTAAGACTTCTAATCGCCCTCCTGCTGGACTC	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132011	GTTCCGTTTGTGCTGTTTCTAAGACTTCTAATCGCCCTCCTGCTGGACTC	132060

BX649586.4	651	CTTCAGCCGCTGTCAGTGCCTTCGAGTCCCTGGTCGCACATTTCGCTAGA	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132061	CTTCAGCCGCTGTCAGTGCCTTCGAGTCCCTGGTCGCACATTTCGCTAGA	132110

BX649586.4	701	TTTCGTCACCGGTCTCCCGCCATCTGGTGGCAATACGGCTGTTTTGACCG	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132111	TTTCGTCACCGGTCTCCCGCCATCTGGTGGCAATACGGCTGTTTTGACCG	132160

BX649586.4	751	TTGTGGACCGGTTCTCGAAGGCTACTCATTTTATTCCTCTGCCCAAATTA	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132161	TTGTGGACCGGTTCTCGAAGGCTACTCATTTTATTCCTCTGCCCAAATTA	132210

BX649586.4	801	CCCTCAGCCAGAGAGACAGCGGATGCTGTCATTAATCACGTCTTTCGCAT	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132211	CCCTCAGCCAGAGAGACAGCGGATGCTGTCATTAATCACGTCTTTCGCAT	132260

BX649586.4	851	TCATGGCCTCCCGACGGATGTGGTTTCTGACAGGGGACCCCAGTTTGTCT	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132261	TCATGGCCTCCCGACGGATGTGGTTTCTGACAGGGGACCCCAGTTTGTCT	132310

BX649586.4	901	CTAAATTTTGGAGAGAATTCTGTCATTTATTGGGAGCGACTGTAAGTCTT	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132311	CTAAATTTTGGAGAGAATTCTGTCATTTATTGGGAGCGACTGTAAGTCTT	132360

BX649586.4	951	TCTTCTGGTTTTCATCCTCAGAGTAACGGACAAACCGAAAGGGCCAACCA	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132361	TCTTCTGGTTTTCATCCTCAGAGTAACGGACAAACCGAAAGGGCCAACCA	132410

BX649586.4	1001	AGATCTCGAGCGCATGTTACGTTGTTTGGTTTCCCAGAATCCCTCCTCTT	1050
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132411	AGATCTCGAGCGCATGTTACGTTGTTTGGTTTCCCAGAATCCCTCCTCTT	132460

BX649586.4	1051	GGAGTCAGCAGCTCCCATGGGTGGAGTACGCACACAATTCATTACCAGTG	1100
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132461	GGAGTCAGCAGCTCCCATGGGTGGAGTACGCACACAATTCATTACCAGTG	132510

BX649586.4	1101	TCGGCTTCGGGCCTTTCTCCGTTTCAGTGTAGCTTAGGTTACCAGCCACC	1150
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132511	TCGGCTTCGGGCCTTTCTCCGTTTCAGTGTAGCTTAGGTTACCAGCCACC	132560

BX649586.4	1151	AGCTTTTCCCAGTCTGGAATCCGAAGTCGCGGTTCCCTCCGCCCACGCCT	1200
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132561	AGCTTTTCCCAGTCTGGAATCCGAAGTCGCGGTTCCCTCCGCCCACGCCT	132610

BX649586.4	1201	TTGTCCAGAGGTGTCGACGCACTTGGAACAGGGCCAGACAGACCCTCCTC	1250
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132611	TTGTCCAGAGGTGTCGACGCACTTGGAACAGGGCCAGACAGACCCTCCTC	132660

BX649586.4	1251	CAAGTGGGTGCGCGCACCAAGGCTAAAGCCGATCGCCACCGGTCGAAGCC	1300
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132661	CAAGTGGGTGCGCGCACCAAGGCTAAAGCCGATCGCCACCGGTCGAAGCC	132710

BX649586.4	1301	TCCCGTTTACGTCGTCGGTCAAAAAGTGTGGCTTTCAACTAAGAATATTC	1350
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132711	TCCCGTTTACGTCGTCGGTCAAAAAGTGTGGCTTTCAACTAAGAATATTC	132760

BX649586.4	1351	CCTTGCGTTCCGTATGTAATAAACTTGCACCTAAATTTATTGGCCCATTC	1400
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132761	CCTTGCGTTCCGTATGTAATAAACTTGCACCTAAATTTATTGGCCCATTC	132810

BX649586.4	1401	ACTGTCATCAAGATCATTAGTCCGGTGGCAGTCCGCCTTAAACTTACTCC	1450
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132811	ACTGTCATCAAGATCATTAGTCCGGTGGCAGTCCGCCTTAAACTTACTCC	132860

BX649586.4	1451	AGCGTACAGGAGAATACATCCCGTGTTTCACGTTTCTAAATTAAAGCCCG	1500
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132861	AGCGTACAGGAGAATACATCCCGTGTTTCACGTTTCTAAATTAAAGCCCG	132910

BX649586.4	1501	TTTTTCATACGGCGATTAACCCGCCCACTCCGGTTCCCCCCCGCCGCGTC	1550
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132911	TTTTTCATACGGCGATTAACCCGCCCACTCCGGTTCCCCCCCGCCGCGTC	132960

BX649586.4	1551	TCGTAGATGGGGAGACCGTTTATTCGGTTAAGCGCATTCTGGACTCGAGA	1600
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	132961	TCGTAGATGGGGAGACCGTTTATTCGGTTAAGCGCATTCTGGACTCGAGA	133010

BX649586.4	1601	CGGAGGGGGCGAGGATTTCAGTACTTGGTGGACTGGGAAGGTTACGGTGC	1650
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133011	CGGAGGGGGCGAGGATTTCAGTACTTGGTGGACTGGGAAGGTTACGGTGC	133060

BX649586.4	1651	GAAGGAGAGAACTTGGGTGCCTGCAAAGGACATATTGGATCACTCTCTTA	1700
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133061	GAAGGAGAGAACTTGGGTGCCTGCAAAGGACATATTGGATCACTCTCTTA	133110

BX649586.4	1701	TCGATGATTACAATCGCCAGGTAAGCGCTTCTGGGAGCACCAGGAGGTGC	1750
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133111	TCGATGATTACAATCGCCAGGTAAGCGCTTCTGGGAGCACCAGGAGGTGC	133160

BX649586.4	1751	TCTTGAGAGAGGGGTAATGTCACGGTTGCAGGTTTGTGCGCTTTTCCGGA	1800
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133161	TCTTGAGAGAGGGGTAATGTCACGGTTGCAGGTTTGTGCGCTTTTCCGGA	133210

BX649586.4	1801	GTGTCTGTTTGATCACGTTGGTTTGTTTTTGTTCTCCTCGTGTATTTGTT	1850
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133211	GTGTCTGTTTGATCACGTTGGTTTGTTTTTGTTCTCCTCGTGTATTTGTT	133260

BX649586.4	1851	TTGATCACGTGTGATGACGGCACTCAGCTGGCTTGATGAGCTCGCCAGCT	1900
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133261	TTGATCACGTGTGATGACGGCACTCAGCTGGCTTGATGAGCTCGCCAGCT	133310

BX649586.4	1901	GAGGCTCATATTCAGGTCTATATATGGGCCACGTTTTCTGTGTGTCTTTG	1950
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133311	GAGGCTCATATTCAGGTCTATATATGGGCCACGTTTTCTGTGTGTCTTTG	133360

BX649586.4	1951	TCAGTTCGTTATGTGTGCTTATGGTGTGCTATTCTGTCTGTGTGCGTAGG	2000
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX470202.7	133361	TCAGTTCGTTATGTGTGCTTATGGTGTGCTATTCTGTCTGTGTGCGTAGG	133410

Overview

Query
BX649586.4 - 128751 bps
Hit
BX470202.7 - 133410 bps
Total alignments
21
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
1100198720001200011314111334101
284.76711657249072654117224173871
3881211978135481550-128991291901
488.981562368799688231-172176724111
584.91312938770487996-172541728381
687.8684139124857124995185076852151
785.1671372067320809-185078852181
879.275261121542121802-186835871081
986.32153284121518121801190189904731
1084.261513326843768768190215905571
1182.431964623783238293-192023924831
1290.3816324312155612179811017231019611
1385.7116632012474812506711017231020371
1492.62941225175151872-11057201058411
1588.319115312722612737811087021088551
1684.65942056856468768-11087291089301
1785.992143884863749024-11176361180421
1890.881622364840048635-11180851183251
1982.93122294124723125016-11269101272021
2081.8168164206672083011269221270861
21993714001766216511284621288611
Short-link