<=>End overlap alignment

Alignment #1 HSP: 808 bps / non-identical: 200 bps

Full alignment

AL928762.2	2372	TCCCTGCACCCTCACCGGGGCACCTGTGAGCCCTGAGGGCCAGTGGGGGT	2421
			||||||||||||||||||||||| ||||||||||||||||||||||||||
AL928767.1	1	TCCCTGCACCCTCACCGGGGCACTTGTGAGCCCTGAGGGCCAGTGGGGGT	50

AL928762.2	2422	CTCACTGCTGCTCCCTCCCACAGCCTAGCCTCGGGCCTCAGGGCTCTGCA	2471
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	51	CTCACTGCTGCTCCCTCCCACAGCCTAGCCTCGGGCCTCAGGGCTCTGCA	100

AL928762.2	2472	TCCAAGCGGCCCAGGGCTCCCTGCGGTCTCAGCCCGAGTGGGCCTTTGAG	2521
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	101	TCCAAGCGGCCCAGGGCTCCCTGCGGTCTCAGCCCGAGTGGGCCTTTGAG	150

AL928762.2	2522	CCTTCGCGTTCTCTGCAGGGTGGGACCTGCCCAAGGGCTGCTGAGGGCTT	2571
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	151	CCTTCGCGTTCTCTGCAGGGTGGGACCTGCCCAAGGGCTGCTGAGGGCTT	200

AL928762.2	2572	CCCAGGGGTCCTGTGGGTCCCACCTAGGGGCAAGCTGGTGAGGAAAGTGG	2621
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	201	CCCAGGGGTCCTGTGGGTCCCACCTAGGGGCAAGCTGGTGAGGAAAGTGG	250

AL928762.2	2622	GTCCTGCCATGGCGGCCGGGTGGGCTGAGTTTTCGGCATCTCTGGGCCCA	2671
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	251	GTCCTGCCATGGCGGCCGGGTGGGCTGAGTTTTCGGCATCTCTGGGCCCA	300

AL928762.2	2672	ACAGCAGGTCCCTGGAGCGGCGCCCACCCCTCCCCCAGGCAGGTGTGAGG	2721
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	301	ACAGCAGGTCCCTGGAGCGGCGCCCACCCCTCCCCCAGGCAGGTGTGAGG	350

AL928762.2	2722	GCTCTGATCTGTTTCTCCTTGAGTGACTCATTCTGGGCAGACTTGGCCCT	2771
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	351	GCTCTGATCTGTTTCTCCTTGAGTGACTCATTCTGGGCAGACTTGGCCCT	400

AL928762.2	2772	CAGGGCACATGCAAATGGTTGTTTGTTCCACACCGAAAACATGTTTCTTG	2821
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	401	CAGGGCACATGCAAATGGTTGTTTGTTCCACACCGAAAACATGTTTCTTG	450

AL928762.2	2822	CCCTCTGAGGCTGTTTCCAGAAATAGCTTGCACGATTCTC----------	2861
			||||||||||||||||||||||||||||||||||||||||          
AL928767.1	451	CCCTCTGAGGCTGTTTCCAGAAATAGCTTGCACGATTCTCCACCTGCAGC	500

AL928762.2	2862	--------------------------------------------------	2861
			                                                  
AL928767.1	501	TGCAGCCGCCACCCACCCAGTGTGGCCAGGCTGGCCCAGGCCTCCAGATT	550

AL928762.2	2862	------------CCGCCCCCTCCCCCAGCGTGGCCAGGCTGGCTCAGGCC	2899
			            ||||||||||||||||||||||||||||||||||||||
AL928767.1	551	CGGGGACACCCCCCGCCCCCTCCCCCAGCGTGGCCAGGCTGGCTCAGGCC	600

AL928762.2	2900	TCCAGATTCGGGGACACCCGCCCCCTCCCCCAGGACAGGCCCACTTGGGT	2949
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	601	TCCAGATTCGGGGACACCCGCCCCCTCCCCCAGGACAGGCCCACTTGGGT	650

AL928762.2	2950	TACTGACACTGGGACCACCCTGCAAACGTCAACTTTATTGAATTCAGTGG	2999
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	651	TACTGACACTGGGACCACCCTGCAAACGTCAACTTTATTGAATTCAGTGG	700

AL928762.2	3000	TTCTGAACTTGTTGCCATCTTTGGGACCAGGACCCAGGGGCAGCCCCCAG	3049
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	701	TTCTGAACTTGTTGCCATCTTTGGGACCAGGACCCAGGGGCAGCCCCCAG	750

AL928762.2	3050	GTTGGCAGGAAGGGCAGGGGAGCCAACGCTGGCAGGGCCCCCAGCCAACC	3099
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	751	GTTGGCAGGAAGGGCAGGGGAGCCAACGCTGGCAGGGCCCCCAGCCAACC	800

AL928762.2	3100	CCCACCCCAGAAGCCCCAAGGAGGCTGAGCGGAGGTGGCCCTGGTGGCCT	3149
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL928767.1	801	CCCACCCCAGAAGCCCCAAGGAGGCTGAGCGGAGGTGGCCCTGGTGGCCT	850

AL928762.2	3150	GGGCACAGGCAGCCCGATTGGTACAGGGCC	3179
			||||||||||||||||||||||||||||||
AL928767.1	851	GGGCACAGGCAGCCCGATTGGTACAGGGCC	880

Compact alignment

AL928762.2	2372	TCCCTGCACCCTCACCGGGGCACCTGTGAGCCCTGAGGGCCAGTGGGGGT	2421
			||||||||||||||||||||||| ||||||||||||||||||||||||||
AL928767.1	1	TCCCTGCACCCTCACCGGGGCACTTGTGAGCCCTGAGGGCCAGTGGGGGT	50

skip 400 bps 100% identity alignment

AL928762.2	2822	CCCTCTGAGGCTGTTTCCAGAAATAGCTTGCACGATTCTC----------	2861
			||||||||||||||||||||||||||||||||||||||||          
AL928767.1	451	CCCTCTGAGGCTGTTTCCAGAAATAGCTTGCACGATTCTCCACCTGCAGC	500

AL928762.2	2862	--------------------------------------------------	2861
			                                                  
AL928767.1	501	TGCAGCCGCCACCCACCCAGTGTGGCCAGGCTGGCCCAGGCCTCCAGATT	550

AL928762.2	2862	------------CCGCCCCCTCCCCCAGCGTGGCCAGGCTGGCTCAGGCC	2899
			            ||||||||||||||||||||||||||||||||||||||
AL928767.1	551	CGGGGACACCCCCCGCCCCCTCCCCCAGCGTGGCCAGGCTGGCTCAGGCC	600

skip 280 bps 100% identity alignment

Overview

Query
AL928762.2 - 3183 bps
Hit
AL928767.1 - 10804 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 808 bps)
Best alignment cartoon

Alternate alignments

Short-link