<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 1850 bps

Full alignment

AL732386.13	1	TTGTACATTCCTAAGATAAGCTTTCCACAATTACAGAACTGATTGAAATA	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36072	TTGTACATTCCTAAGATAAGCTTTCCACAATTACAGAACTGATTGAAATA	36121

AL732386.13	51	TGACACATCTCAGTGTAGCACTATGAATGGAAAAACACTTTTGTTGAACA	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36122	TGACACATCTCAGTGTAGCACTATGAATGGAAAAACACTTTTGTTGAACA	36171

AL732386.13	101	TTCAAAGGATGACAAAAAGCAGCTTACCTGAGCAGCAATGTGAGCATCAT	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36172	TTCAAAGGATGACAAAAAGCAGCTTACCTGAGCAGCAATGTGAGCATCAT	36221

AL732386.13	151	GTGGAGCTTTTCAGGAAGACACACTTATAACAACACAGACAATTTCACAA	200
			|||||||||||||||||||||||||||||||||||||||||||| |||||
AL731564.5	36222	GTGGAGCTTTTCAGGAAGACACACTTATAACAACACAGACAATTACACAA	36271

AL732386.13	201	TTGAGACAAATTATTTTTAAAGGGCACCTATATTACCTCTTTTACAAGAT	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36272	TTGAGACAAATTATTTTTAAAGGGCACCTATATTACCTCTTTTACAAGAT	36321

AL732386.13	251	GTAAGATCTAACTTTGGTGTCTCCAGAAAGTGCCTGTAAAGCTTCAGCTC	300
			|||||||||||||||||||||||||||||||| |||||||||||||||||
AL731564.5	36322	GTAAGATCTAACTTTGGTGTCTCCAGAAAGTGTCTGTAAAGCTTCAGCTC	36371

AL732386.13	301	AAAATACCCATCAGATTATATATAATGTAGAATCTGCCCATTTTAGTGTC	350
			|||||||||||||||||| |||||||||||||||||||||||||||||||
AL731564.5	36372	AAAATACCCATCAGATTACATATAATGTAGAATCTGCCCATTTTAGTGTC	36421

AL732386.13	351	CGAAGACTATGTAGCTGTTTTTGTAGCCTGTGGCTTTAAATTCAAATGAA	400
			|||||||||||||||||||||||||||||||||||| |||||||||||||
AL731564.5	36422	CGAAGACTATGTAGCTGTTTTTGTAGCCTGTGGCTTAAAATTCAAATGAA	36471

AL732386.13	401	CTGCTTCTCCCCGCCCACCGTTCTTATGTGTGTGTCTGCTTCTCATGCCT	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36472	CTGCTTCTCCCCGCCCACCGTTCTTATGTGTGTGTCTGCTTCTCATGCCT	36521

AL732386.13	451	TTCATCAGATAAACAGCAGTCAGTGATAGGGCACTATCACACACCCGGTG	500
			|| |||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36522	TTGATCAGATAAACAGCAGTCAGTGATAGGGCACTATCACACACCCGGTG	36571

AL732386.13	501	CAATAAGGTGCAAGACGTGTTTTGTGATCCTACGCAACCCTAATTTTCAC	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36572	CAATAAGGTGCAAGACGTGTTTTGTGATCCTACGCAACCCTAATTTTCAC	36621

AL732386.13	551	TTTTTTCGCCACATTGTTTCAAATATTAATATTTTTGCGCTACTTTGTGG	600
			 |||| ||||||||||||||||||||||||| |||||||||||| |||||
AL731564.5	36622	GTTTTGCGCCACATTGTTTCAAATATTAATACTTTTGCGCTACTATGTGG	36671

AL732386.13	601	ACTCATGGGTGTGCTGGTTTATAAAGAAGGATTTGTTTTGAGAAACTAAA	650
			||| ||| |||||||||||||||||||||| | |||||||||||||||||
AL731564.5	36672	ACTAATGAGTGTGCTGGTTTATAAAGAAGG-TGTGTTTTGAGAAACTAAA	36720

AL732386.13	651	ATAGGCTGCACCATTGACCAAGTTAAAGCTGGTCAAAATTCCAGCACAGA	700
			|||||||||||||||||||||||||||||||||||||||     ||||||
AL731564.5	36721	ATAGGCTGCACCATTGACCAAGTTAAAGCTGGTCAAAAT--GGTCACAGA	36768

AL732386.13	701	GCGTGTTAGTTTTGCGCCTATGCATGTCAAAACTGCGTACATATTGCTTG	750
			|| |||||||| ||| ||||||||||||||||||||||||| ||||||||
AL731564.5	36769	GCATGTTAGTTATGCACCTATGCATGTCAAAACTGCGTACACATTGCTTG	36818

AL732386.13	751	ATACATGCAGGATGTACAGCAATACACACATATCTTTACATAAATAAAAA	800
			||||||||||| |||||||| |||||||||||||||||||||||| ||||
AL731564.5	36819	ATACATGCAGGGTGTACAGCTATACACACATATCTTTACATAAATTAAAA	36868

AL732386.13	801	AATAAAGGATTACAAAAATAATTAATTTTCTACAATATATATATATATAT	850
			||||||||||||||||||| ||  ||||||||| ||||||||||||||||
AL731564.5	36869	AATAAAGGATTACAAAAATTATACATTTTCTACTATATATATATATATAT	36918

AL732386.13	851	ATATATATATATATATATATATATATATATATATATATATATATATATAT	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36919	ATATATATATATATATATATATATATATATATATATATATATATATATAT	36968

AL732386.13	901	ATATATATATATATATATATATGTATATATATATTACTACTACCATACAT	950
			|||||||                  ||||||||||| |||||| ||||||
AL731564.5	36969	ATATATA------------------TATATATATTATTACTACAATACAT	37000

AL732386.13	951	GCCTTC---ATCTCAGGGGGCTTTTTCAGTTT-TTCATGACAATTTGAAT	996
			||||||   ||||||||||||||||| ||||| |||||||||||||||||
AL731564.5	37001	GCCTTCTTTATCTCAGGGGGCTTTTTTAGTTTATTCATGACAATTTGAAT	37050

AL732386.13	997	TTTTATTATAATGTTTTTATTATTA-------------------------	1021
			||||||||||||||| |||||||||                         
AL731564.5	37051	TTTTATTATAATGTTGTTATTATTATTAAAAGTATTATTTTATTATATGC	37100

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37101	ATATTTATATTTGTTTTTATAATAACAAGTTTAGATTCGTCCATTTTATG	37150

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37151	CTTTGAGACATCTGCATCACTATATGGGGCATAAGAATAGGATGTGTGGT	37200

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37201	AAGATATTACTCAGTTTTTTGACCACACTTATTATTGTTCATTTATTCAT	37250

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37251	TTGCTGGAAATTAGATCTGAATTTAGAAATAGTTTTGAAACAAATCTTTG	37300

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37301	CACTTAACAAACAAAATTAAATATGTAGGCTAGTGGATGTCTTCAGTGGA	37350

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37351	GTGCGTACAACACTGTTCCCTTATCCACGAAGGTAAAGGAGTAAAGTAAA	37400

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37401	GAGTAAAAGTAACATAAAGAGAAAGCAAAGAGGCAGAATGGAGGAGGCTC	37450

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37451	GTTCTTTATCCTTGCGCTGCAGATGCTCTGTTAAACTGTTTTCTCGCTAG	37500

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37501	TAAAACATTCAGTTTTTCCACTAACAAAGTCTGCCTTGTAAATAGCAAAC	37550

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37551	GCACCCTGGTGTCACAACTGATTCTTAAAGGGAATGGGAGATGAGACTTG	37600

AL732386.13	1022	-----------------------------------------------AAA	1024
			                                               |  
AL731564.5	37601	TAACATCTGTTTTAATCCCAGTTTTTTTGCAAAAATGTTCTGTGTACATG	37650

AL732386.13	1025	GTTAGTTAGATATATATATATATATATATATATATATATATATATATATA	1074
			  ||   |  |   |||| | | | |         |   | ||   |   
AL731564.5	37651	TGTATACATGTTATTATAAAGACACAGCATCTGTCAATCAAATCGGTGGG	37700

AL732386.13	1075	TATATATATATATATATATATAGTTTTTTATATATAGCCTCAAAGTCACT	1124
			| || | |   | |  | ||       ||       ||||||||||||||
AL731564.5	37701	TGTAGAAAACCACACTTCTACGTCACATTGCCGTGGGCCTCAAAGTCACT	37750

AL732386.13	1125	TGGATTTGGATCTCTATTATAACGTCAGGAAAAAAATAAATAAATAAAAA	1174
			|||||||||||||||||||||||||||| |||||||              
AL731564.5	37751	TGGATTTGGATCTCTATTATAACGTCAGAAAAAAAA--------------	37786

AL732386.13	1175	TAATAATAATAATAATAATAAAACACTTGTTATGTTCAGATCAATCCCAT	1224
			           | || || |||||| |||||  ||| |||||| ||| ||
AL731564.5	37787	-----------AAAAAAAAAAAACATTTGTTGGGTTTAGATCACTCCAAT	37825

AL732386.13	1225	ATGAAAGTGGACACAATACAAACAGTTCTGTCCAAACAGCTTACAAAAGA	1274
			||||||||||||||| |||| |||||||||||||||||||||| ||||||
AL731564.5	37826	ATGAAAGTGGACACACTACAGACAGTTCTGTCCAAACAGCTTAGAAAAGA	37875

AL732386.13	1275	TAATTTTTAATATAGGTGCCCTTTATATTTGAAAATAAAATAAATAAAAA	1324
			||||||||||||||||||||||||| |||||||||||||||||| |||||
AL731564.5	37876	TAATTTTTAATATAGGTGCCCTTTAAATTTGAAAATAAAATAAACAAAAA	37925

AL732386.13	1325	TCACACGTTTTTTTATAGCGTAGAAAACAACAATTAAGCTTTAATACTAA	1374
			|||||| ||||||||||||||||||||||||| ||||||||| |||||||
AL731564.5	37926	TCACACTTTTTTTTATAGCGTAGAAAACAACATTTAAGCTTTTATACTAA	37975

AL732386.13	1375	GTGATTGCATAGAAATCAAAATAGCATTCTAGTAAATCATGATTATTTTA	1424
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	37976	GTGATTGCATAGAAATCAAAATAGCATTCTAGTAAATCATGATTATTTTA	38025

AL732386.13	1425	CTGTAAAACTACCATACTTTTACACTGATATTAAACAAAATGGTCTTCCA	1474
			|||||| ||||||||| |||||||||||||||||| ||| ||||||||||
AL731564.5	38026	CTGTAATACTACCATA-TTTTACACTGATATTAAATAAA-TGGTCTTCCA	38073

AL732386.13	1475	CTTGAAATAAATTACTTTTGAAGTAAAGATTTCTAGAGGGAAAAAGATCC	1524
			|||||||||||||||||||||||| | |||||||||||||||||||||||
AL731564.5	38074	CTTGAAATAAATTACTTTTGAAGTGACGATTTCTAGAGGGAAAAAGATCC	38123

AL732386.13	1525	AGGGTCTCATTTAATGCAGATAA-GTAAAA-AAAAAAAAAAAATGACACA	1572
			|||||||||||||||| |||||| |||||| |||||||||||||||||||
AL731564.5	38124	AGGGTCTCATTTAATGGAGATAAAGTAAAAAAAAAAAAAAAAATGACACA	38173

AL732386.13	1573	AAAATACTCAGAGTATATACTGTTTTCTTTTAATGACTACAACAGCAAAG	1622
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38174	AAAATACTCAGAGTATATACTGTTTTCTTTTAATGACTACAACAGCAAAG	38223

AL732386.13	1623	GCTAAAATAATGCTTACAAACAGAATTAACAATAATACATGAACAGAGCT	1672
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38224	GCTAAAATAATGCTTACAAACAGAATTAACAATAATACATGAACAGAGCT	38273

AL732386.13	1673	CTTCCAAAGTGCTTCCTTGTGCAAGAGTATACTAAAATATATAATATAAA	1722
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38274	CTTCCAAAGTGCTTCCTTGTGCAAGAGTATACTAAAATATATAATATAAA	38323

AL732386.13	1723	ATCAAACAGCATTACAAGTACGTGTTATTGTGGAAATCGTCCAGTTCTGC	1772
			||||||| ||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38324	ATCAAACTGCATTACAAGTACGTGTTATTGTGGAAATCGTCCAGTTCTGC	38373

AL732386.13	1773	CATTCATGACACCGCTTTTAGTTAAAAAATACTGTTTTAAATGGATCCAT	1822
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38374	CATTCATGACACCGCTTTTAGTTAAAAAATACTGTTTTAAATGGATCCAT	38423

AL732386.13	1823	TGCTACAAATAAAAACAATATCATCATTTTACAAGTGATCTAATACAAAA	1872
			||||||||||||||||||||| ||||||||||||||||||||||||||||
AL731564.5	38424	TGCTACAAATAAAAACAATATTATCATTTTACAAGTGATCTAATACAAAA	38473

AL732386.13	1873	GGAGTGTGATTATGACGTACGATAAGTGTTAAAAATGAAGTTATAAAACA	1922
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38474	GGAGTGTGATTATGACGTACGATAAGTGTTAAAAATGAAGTTATAAAACA	38523

AL732386.13	1923	ATGTACAGGAAACTCTCCCTTTTCTGAGTTTTATTAACTGCGATATGCCA	1972
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38524	ATGTACAGGAAACTCTCCCTTTTCTGAGTTTTATTAACTGCGATATGCCA	38573

AL732386.13	1973	AAGAGTTTGTAATGTGTAACACAAGCTT	2000
			||||||||||||||||||||||||||||
AL731564.5	38574	AAGAGTTTGTAATGTGTAACACAAGCTT	38601

Compact alignment

skip 150 bps 100% identity alignment

AL732386.13	151	GTGGAGCTTTTCAGGAAGACACACTTATAACAACACAGACAATTTCACAA	200
			|||||||||||||||||||||||||||||||||||||||||||| |||||
AL731564.5	36222	GTGGAGCTTTTCAGGAAGACACACTTATAACAACACAGACAATTACACAA	36271

skip 50 bps 100% identity alignment

AL732386.13	251	GTAAGATCTAACTTTGGTGTCTCCAGAAAGTGCCTGTAAAGCTTCAGCTC	300
			|||||||||||||||||||||||||||||||| |||||||||||||||||
AL731564.5	36322	GTAAGATCTAACTTTGGTGTCTCCAGAAAGTGTCTGTAAAGCTTCAGCTC	36371

AL732386.13	301	AAAATACCCATCAGATTATATATAATGTAGAATCTGCCCATTTTAGTGTC	350
			|||||||||||||||||| |||||||||||||||||||||||||||||||
AL731564.5	36372	AAAATACCCATCAGATTACATATAATGTAGAATCTGCCCATTTTAGTGTC	36421

AL732386.13	351	CGAAGACTATGTAGCTGTTTTTGTAGCCTGTGGCTTTAAATTCAAATGAA	400
			|||||||||||||||||||||||||||||||||||| |||||||||||||
AL731564.5	36422	CGAAGACTATGTAGCTGTTTTTGTAGCCTGTGGCTTAAAATTCAAATGAA	36471

skip 50 bps 100% identity alignment

AL732386.13	451	TTCATCAGATAAACAGCAGTCAGTGATAGGGCACTATCACACACCCGGTG	500
			|| |||||||||||||||||||||||||||||||||||||||||||||||
AL731564.5	36522	TTGATCAGATAAACAGCAGTCAGTGATAGGGCACTATCACACACCCGGTG	36571

skip 50 bps 100% identity alignment

AL732386.13	551	TTTTTTCGCCACATTGTTTCAAATATTAATATTTTTGCGCTACTTTGTGG	600
			 |||| ||||||||||||||||||||||||| |||||||||||| |||||
AL731564.5	36622	GTTTTGCGCCACATTGTTTCAAATATTAATACTTTTGCGCTACTATGTGG	36671

AL732386.13	601	ACTCATGGGTGTGCTGGTTTATAAAGAAGGATTTGTTTTGAGAAACTAAA	650
			||| ||| |||||||||||||||||||||| | |||||||||||||||||
AL731564.5	36672	ACTAATGAGTGTGCTGGTTTATAAAGAAGG-TGTGTTTTGAGAAACTAAA	36720

AL732386.13	651	ATAGGCTGCACCATTGACCAAGTTAAAGCTGGTCAAAATTCCAGCACAGA	700
			|||||||||||||||||||||||||||||||||||||||     ||||||
AL731564.5	36721	ATAGGCTGCACCATTGACCAAGTTAAAGCTGGTCAAAAT--GGTCACAGA	36768

AL732386.13	701	GCGTGTTAGTTTTGCGCCTATGCATGTCAAAACTGCGTACATATTGCTTG	750
			|| |||||||| ||| ||||||||||||||||||||||||| ||||||||
AL731564.5	36769	GCATGTTAGTTATGCACCTATGCATGTCAAAACTGCGTACACATTGCTTG	36818

AL732386.13	751	ATACATGCAGGATGTACAGCAATACACACATATCTTTACATAAATAAAAA	800
			||||||||||| |||||||| |||||||||||||||||||||||| ||||
AL731564.5	36819	ATACATGCAGGGTGTACAGCTATACACACATATCTTTACATAAATTAAAA	36868

AL732386.13	801	AATAAAGGATTACAAAAATAATTAATTTTCTACAATATATATATATATAT	850
			||||||||||||||||||| ||  ||||||||| ||||||||||||||||
AL731564.5	36869	AATAAAGGATTACAAAAATTATACATTTTCTACTATATATATATATATAT	36918

skip 50 bps 100% identity alignment

AL732386.13	901	ATATATATATATATATATATATGTATATATATATTACTACTACCATACAT	950
			|||||||                  ||||||||||| |||||| ||||||
AL731564.5	36969	ATATATA------------------TATATATATTATTACTACAATACAT	37000

AL732386.13	951	GCCTTC---ATCTCAGGGGGCTTTTTCAGTTT-TTCATGACAATTTGAAT	996
			||||||   ||||||||||||||||| ||||| |||||||||||||||||
AL731564.5	37001	GCCTTCTTTATCTCAGGGGGCTTTTTTAGTTTATTCATGACAATTTGAAT	37050

AL732386.13	997	TTTTATTATAATGTTTTTATTATTA-------------------------	1021
			||||||||||||||| |||||||||                         
AL731564.5	37051	TTTTATTATAATGTTGTTATTATTATTAAAAGTATTATTTTATTATATGC	37100

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37101	ATATTTATATTTGTTTTTATAATAACAAGTTTAGATTCGTCCATTTTATG	37150

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37151	CTTTGAGACATCTGCATCACTATATGGGGCATAAGAATAGGATGTGTGGT	37200

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37201	AAGATATTACTCAGTTTTTTGACCACACTTATTATTGTTCATTTATTCAT	37250

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37251	TTGCTGGAAATTAGATCTGAATTTAGAAATAGTTTTGAAACAAATCTTTG	37300

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37301	CACTTAACAAACAAAATTAAATATGTAGGCTAGTGGATGTCTTCAGTGGA	37350

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37351	GTGCGTACAACACTGTTCCCTTATCCACGAAGGTAAAGGAGTAAAGTAAA	37400

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37401	GAGTAAAAGTAACATAAAGAGAAAGCAAAGAGGCAGAATGGAGGAGGCTC	37450

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37451	GTTCTTTATCCTTGCGCTGCAGATGCTCTGTTAAACTGTTTTCTCGCTAG	37500

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37501	TAAAACATTCAGTTTTTCCACTAACAAAGTCTGCCTTGTAAATAGCAAAC	37550

AL732386.13	1022	--------------------------------------------------	1021
			                                                  
AL731564.5	37551	GCACCCTGGTGTCACAACTGATTCTTAAAGGGAATGGGAGATGAGACTTG	37600

AL732386.13	1022	-----------------------------------------------AAA	1024
			                                               |  
AL731564.5	37601	TAACATCTGTTTTAATCCCAGTTTTTTTGCAAAAATGTTCTGTGTACATG	37650

AL732386.13	1025	GTTAGTTAGATATATATATATATATATATATATATATATATATATATATA	1074
			  ||   |  |   |||| | | | |         |   | ||   |   
AL731564.5	37651	TGTATACATGTTATTATAAAGACACAGCATCTGTCAATCAAATCGGTGGG	37700

AL732386.13	1075	TATATATATATATATATATATAGTTTTTTATATATAGCCTCAAAGTCACT	1124
			| || | |   | |  | ||       ||       ||||||||||||||
AL731564.5	37701	TGTAGAAAACCACACTTCTACGTCACATTGCCGTGGGCCTCAAAGTCACT	37750

AL732386.13	1125	TGGATTTGGATCTCTATTATAACGTCAGGAAAAAAATAAATAAATAAAAA	1174
			|||||||||||||||||||||||||||| |||||||              
AL731564.5	37751	TGGATTTGGATCTCTATTATAACGTCAGAAAAAAAA--------------	37786

AL732386.13	1175	TAATAATAATAATAATAATAAAACACTTGTTATGTTCAGATCAATCCCAT	1224
			           | || || |||||| |||||  ||| |||||| ||| ||
AL731564.5	37787	-----------AAAAAAAAAAAACATTTGTTGGGTTTAGATCACTCCAAT	37825

AL732386.13	1225	ATGAAAGTGGACACAATACAAACAGTTCTGTCCAAACAGCTTACAAAAGA	1274
			||||||||||||||| |||| |||||||||||||||||||||| ||||||
AL731564.5	37826	ATGAAAGTGGACACACTACAGACAGTTCTGTCCAAACAGCTTAGAAAAGA	37875

AL732386.13	1275	TAATTTTTAATATAGGTGCCCTTTATATTTGAAAATAAAATAAATAAAAA	1324
			||||||||||||||||||||||||| |||||||||||||||||| |||||
AL731564.5	37876	TAATTTTTAATATAGGTGCCCTTTAAATTTGAAAATAAAATAAACAAAAA	37925

AL732386.13	1325	TCACACGTTTTTTTATAGCGTAGAAAACAACAATTAAGCTTTAATACTAA	1374
			|||||| ||||||||||||||||||||||||| ||||||||| |||||||
AL731564.5	37926	TCACACTTTTTTTTATAGCGTAGAAAACAACATTTAAGCTTTTATACTAA	37975

skip 50 bps 100% identity alignment

AL732386.13	1425	CTGTAAAACTACCATACTTTTACACTGATATTAAACAAAATGGTCTTCCA	1474
			|||||| ||||||||| |||||||||||||||||| ||| ||||||||||
AL731564.5	38026	CTGTAATACTACCATA-TTTTACACTGATATTAAATAAA-TGGTCTTCCA	38073

AL732386.13	1475	CTTGAAATAAATTACTTTTGAAGTAAAGATTTCTAGAGGGAAAAAGATCC	1524
			|||||||||||||||||||||||| | |||||||||||||||||||||||
AL731564.5	38074	CTTGAAATAAATTACTTTTGAAGTGACGATTTCTAGAGGGAAAAAGATCC	38123

AL732386.13	1525	AGGGTCTCATTTAATGCAGATAA-GTAAAA-AAAAAAAAAAAATGACACA	1572
			|||||||||||||||| |||||| |||||| |||||||||||||||||||
AL731564.5	38124	AGGGTCTCATTTAATGGAGATAAAGTAAAAAAAAAAAAAAAAATGACACA	38173

skip 150 bps 100% identity alignment

AL732386.13	1723	ATCAAACAGCATTACAAGTACGTGTTATTGTGGAAATCGTCCAGTTCTGC	1772
			||||||| ||||||||||||||||||||||||||||||||||||||||||
AL731564.5	38324	ATCAAACTGCATTACAAGTACGTGTTATTGTGGAAATCGTCCAGTTCTGC	38373

skip 50 bps 100% identity alignment

AL732386.13	1823	TGCTACAAATAAAAACAATATCATCATTTTACAAGTGATCTAATACAAAA	1872
			||||||||||||||||||||| ||||||||||||||||||||||||||||
AL731564.5	38424	TGCTACAAATAAAAACAATATTATCATTTTACAAGTGATCTAATACAAAA	38473

skip 128 bps 100% identity alignment

Overview

Query
AL732386.13 - 50895 bps
Hit
AL731564.5 - 38601 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

Short-link