<=>End overlap alignment

Alignment #1 HSP: 311 bps / non-identical: 311 bps

Full alignment

C  AL355000.11	889	CAAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG	840
			|||| | ||| ||| || |||||||| |||||||||||||||||||||||
  AL671532.13	209651	CAAAATAGGCTGGGTGCAGTGGCTCA-GCCTGTAATCCCAGCACTTTGGG	209699

C  AL355000.11	839	AGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCT	790
			|||||||||||||||||||||||||| |||||||||||||||||||||||
  AL671532.13	209700	AGGCCGAGGCGGGTGGATCACGAGGTTAGGAGATCGAGACCATCCTGGCT	209749

C  AL355000.11	789	AACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGG	740
			|||||||||||||||||||||||||||||||||    |||||||||||||
  AL671532.13	209750	AACACGGTGAAACCCCGTCTCTACTAAAAATAC----AAAAATTAGCCGG	209795

C  AL355000.11	739	GCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGG	690
			|| ||  |||||| ||||||||| |||||||||| ||| |||||||||||
  AL671532.13	209796	GCATGGCGGCGGGAGCCTGTAGTACCAGCTACTCCAGATGCTGAGGCAGG	209845

C  AL355000.11	689	AGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGC	640
			| |||||| ||||||||||||||||||||||||||||||||||||  |||
  AL671532.13	209846	AAAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGC	209895

C  AL355000.11	639	CACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAA	590
			||||||||||| |||||||  ||||  | |||||||||||||||||||||
  AL671532.13	209896	CACTGCACTCCAGCCTGGGTAACAGGACCAGACTCCGTCTCAAAAAAAAA	209945

C  AL355000.11	589	AAAAAAAAAAA	579
			|||||| ||||
  AL671532.13	209946	AAAAAAGAAAA	209956

Overview

Query
AL355000.11 - 219376 bps
Hit
AL671532.13 - 211173 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 311 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
190.53211311579889-12096512099561
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