<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 0 bps

Full alignment

AL691436.7	1	TGAATCACATACCTTTTCTATGTCTTTAAGATGGAGAGATGAGCTAAAGA	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	183868	TGAATCACATACCTTTTCTATGTCTTTAAGATGGAGAGATGAGCTAAAGA	183917

AL691436.7	51	TGTTGTTGGCCCCAAGAGTCTTTTTGATGCTATTGCTTGCAAGTCAGTTT	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	183918	TGTTGTTGGCCCCAAGAGTCTTTTTGATGCTATTGCTTGCAAGTCAGTTT	183967

AL691436.7	101	TCACAAGAGTGGATCTTCTAGATGTAGACAAGGGAATAAAATGATCAGAT	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	183968	TCACAAGAGTGGATCTTCTAGATGTAGACAAGGGAATAAAATGATCAGAT	184017

AL691436.7	151	AAGCAAACAACCCATGCAGGCTCAGGTTCTCAGCAGCTGGATTCCATGGA	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184018	AAGCAAACAACCCATGCAGGCTCAGGTTCTCAGCAGCTGGATTCCATGGA	184067

AL691436.7	201	CTGAGCTCAGTACAGAGCAATCGCTAGGGTTCCCGCTGCCATTCTGAATG	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184068	CTGAGCTCAGTACAGAGCAATCGCTAGGGTTCCCGCTGCCATTCTGAATG	184117

AL691436.7	251	GCAGACTTCCCTTTTCATCAGTTCAGGGGTCAGGGCAGAGCCTGGCCCTT	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184118	GCAGACTTCCCTTTTCATCAGTTCAGGGGTCAGGGCAGAGCCTGGCCCTT	184167

AL691436.7	301	TGTTTGGAAGCCATAATAGGAACTACTGAAAACATTCATTACCAGAGCAA	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184168	TGTTTGGAAGCCATAATAGGAACTACTGAAAACATTCATTACCAGAGCAA	184217

AL691436.7	351	ACCCCACAGTGCAGACACATCTCTGGGAACTGTATTTGAGAAAATTGCAC	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184218	ACCCCACAGTGCAGACACATCTCTGGGAACTGTATTTGAGAAAATTGCAC	184267

AL691436.7	401	CGTTATTCACTGAATTCAGAAACCCTACAGAGACAGCATTGCTATATACG	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184268	CGTTATTCACTGAATTCAGAAACCCTACAGAGACAGCATTGCTATATACG	184317

AL691436.7	451	TTTTCTATCCATCTTGTAAAGCAGAAATCTTACCACAGAAAAATGGACCT	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184318	TTTTCTATCCATCTTGTAAAGCAGAAATCTTACCACAGAAAAATGGACCT	184367

AL691436.7	501	GTTTATCCAATTAGAGCAATCATGAAAATAAATAGTTATCCATAGAACTG	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184368	GTTTATCCAATTAGAGCAATCATGAAAATAAATAGTTATCCATAGAACTG	184417

AL691436.7	551	GCCTAAAACAATTCAGAACAAGAGATCAGGTCCAGGTCCAGGAAAAAGTC	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184418	GCCTAAAACAATTCAGAACAAGAGATCAGGTCCAGGTCCAGGAAAAAGTC	184467

AL691436.7	601	CTCATGATGCATTTTTTCAGTATGTTCTTTTACACTCCTGCGAGCCTCAT	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184468	CTCATGATGCATTTTTTCAGTATGTTCTTTTACACTCCTGCGAGCCTCAT	184517

AL691436.7	651	GATTTCCCCGAATCTGTCATTATTTCTGCTACCATATTTCAGTTTCTTAG	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184518	GATTTCCCCGAATCTGTCATTATTTCTGCTACCATATTTCAGTTTCTTAG	184567

AL691436.7	701	AATACTTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184568	AATACTTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	184617

AL691436.7	751	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCT	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184618	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCT	184667

AL691436.7	801	TCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGGT	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184668	TCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGGT	184717

AL691436.7	851	TTTTGTTTTGTTTTGTTTTGTTTTAGCAAAATTGGATGGAAAATTGATTT	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184718	TTTTGTTTTGTTTTGTTTTGTTTTAGCAAAATTGGATGGAAAATTGATTT	184767

AL691436.7	901	TTAGTTCAGTTGCTTATCTGAGAACTTGAACTCACTCATGACTTCCTGGT	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184768	TTAGTTCAGTTGCTTATCTGAGAACTTGAACTCACTCATGACTTCCTGGT	184817

AL691436.7	951	ACCTCCCAAGCTCGGGCACTGGATCTGTGGATGAGGCCTAAAGGACAGAA	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184818	ACCTCCCAAGCTCGGGCACTGGATCTGTGGATGAGGCCTAAAGGACAGAA	184867

AL691436.7	1001	TTGGACTTTTTAATGGGAGCTGACTGCGCCTGACTGCGCTTCCTGGCTTG	1050
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184868	TTGGACTTTTTAATGGGAGCTGACTGCGCCTGACTGCGCTTCCTGGCTTG	184917

AL691436.7	1051	ATTTTATAGAGCATGACCTTATTTTGGGGCCACCTGACATTCTGGATTGT	1100
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184918	ATTTTATAGAGCATGACCTTATTTTGGGGCCACCTGACATTCTGGATTGT	184967

AL691436.7	1101	GCTGGGGTAAGACCTTTCAGACTTTCATGAGCACACACATTACCTCTTAG	1150
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	184968	GCTGGGGTAAGACCTTTCAGACTTTCATGAGCACACACATTACCTCTTAG	185017

AL691436.7	1151	GATGCAGACTCTAGGACCCAGGAGGTGGCTTAGTCAGTAGAGTGCTTGCT	1200
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185018	GATGCAGACTCTAGGACCCAGGAGGTGGCTTAGTCAGTAGAGTGCTTGCT	185067

AL691436.7	1201	CTACAAACATCAAGACCTGTTTGATTCACATGTCTTGGTGTGCATTTCTA	1250
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185068	CTACAAACATCAAGACCTGTTTGATTCACATGTCTTGGTGTGCATTTCTA	185117

AL691436.7	1251	TTGCTGTGATAAAACACCGAGACCAAAAGCAACTTAAGGAGTACAGGGTT	1300
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185118	TTGCTGTGATAAAACACCGAGACCAAAAGCAACTTAAGGAGTACAGGGTT	185167

AL691436.7	1301	TATTTGGCTTACAGGTTATACGGTCAATCACAGAGGCAGGTTAAGTCAGG	1350
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185168	TATTTGGCTTACAGGTTATACGGTCAATCACAGAGGCAGGTTAAGTCAGG	185217

AL691436.7	1351	AACCTGAAGACAGGACCTGGAGCCGAAGCCATGAAGGAAGCTGCTTCCTG	1400
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185218	AACCTGAAGACAGGACCTGGAGCCGAAGCCATGAAGGAAGCTGCTTCCTG	185267

AL691436.7	1401	GAGGCTCCCCATAGCTTGCTTAGCCTGCCTGCCTGCCTGCTTGCCTTCTT	1450
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185268	GAGGCTCCCCATAGCTTGCTTAGCCTGCCTGCCTGCCTGCTTGCCTTCTT	185317

AL691436.7	1451	TCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTCTTTCTTTCTT	1500
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185318	TCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTCTTTCTTTCTTTCTT	185367

AL691436.7	1501	TCTTTCTTTCTTTCTTTTTTCTTCCTTCCTTTGTTCTTTCATTCTCTCTC	1550
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185368	TCTTTCTTTCTTTCTTTTTTCTTCCTTCCTTTGTTCTTTCATTCTCTCTC	185417

AL691436.7	1551	TCTCTCTCTCTCTCTCTCTGGTTTTTCGGGCCAGGGTTTCTCTGTGTAGT	1600
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185418	TCTCTCTCTCTCTCTCTCTGGTTTTTCGGGCCAGGGTTTCTCTGTGTAGT	185467

AL691436.7	1601	CTTGGCGGACCTGGAACTCGATCTGTAGAAGACCAGGCTAGCCTCAAACC	1650
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185468	CTTGGCGGACCTGGAACTCGATCTGTAGAAGACCAGGCTAGCCTCAAACC	185517

AL691436.7	1651	CTCAGAGACTCATCTCCCACCAGCCTCTGCCTTCTGACTGCTGAGATTAA	1700
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185518	CTCAGAGACTCATCTCCCACCAGCCTCTGCCTTCTGACTGCTGAGATTAA	185567

AL691436.7	1701	AGATATAAAGCCTGATTTTAGCCCGGTCTTTTATATAATCCTAGATCACA	1750
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185568	AGATATAAAGCCTGATTTTAGCCCGGTCTTTTATATAATCCTAGATCACA	185617

AL691436.7	1751	TGCCCAGGGGTGGCACTGCCCCTCCCAATTCTATAATTAATAAAAATAAT	1800
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185618	TGCCCAGGGGTGGCACTGCCCCTCCCAATTCTATAATTAATAAAAATAAT	185667

AL691436.7	1801	ATAGATATAGATGCCATATAGATGTGCCTTTAGGCAATCTGATGGGGCAT	1850
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185668	ATAGATATAGATGCCATATAGATGTGCCTTTAGGCAATCTGATGGGGCAT	185717

AL691436.7	1851	TTTCTCAATTAAGGTTCCCCTTTCCAGATAACACTAGTTTGTATCAAGTT	1900
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185718	TTTCTCAATTAAGGTTCCCCTTTCCAGATAACACTAGTTTGTATCAAGTT	185767

AL691436.7	1901	GACAAAAGACTAACCAGGATACCCCAGGGTCCAGATAAATGCTGGATGTG	1950
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185768	GACAAAAGACTAACCAGGATACCCCAGGGTCCAGATAAATGCTGGATGTG	185817

AL691436.7	1951	TGGGGATGCTTGTAGTCCCAGGACTGGAGAAATAGAGACAGGAGGAATTC	2000
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL606744.30	185818	TGGGGATGCTTGTAGTCCCAGGACTGGAGAAATAGAGACAGGAGGAATTC	185867

Overview

Query
AL691436.7 - 66628 bps
Hit
AL606744.30 - 185867 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

Short-link