<=>End overlap alignment

Alignment #1 HSP: 100 bps / non-identical: 50 bps

Full alignment

AL049542.10	1	GAGAGGCGGAGGTTACAGTGAGCCAAGATCGCGCCACCGCACTCCAGCCC	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL023881.24	35480	GAGAGGCGGAGGTTACAGTGAGCCAAGATCGCGCCACCGCACTCCAGCCC	35529

AL049542.10	51	AGGCGAAAGTGCAAGACTGTGTCTCAAAAAAGAAGAAAAGAGATGGGATC	100
			|||||||||||||||||||||||||||| |||||||||||||||||||||
AL023881.24	35530	AGGCGAAAGTGCAAGACTGTGTCTCAAAGAAGAAGAAAAGAGATGGGATC	35579

Compact alignment

skip 50 bps 100% identity alignment

AL049542.10	51	AGGCGAAAGTGCAAGACTGTGTCTCAAAAAAGAAGAAAAGAGATGGGATC	100
			|||||||||||||||||||||||||||| |||||||||||||||||||||
AL023881.24	35530	AGGCGAAAGTGCAAGACTGTGTCTCAAAGAAGAAGAAAAGAGATGGGATC	35579

Overview

Query
AL049542.10 - 58885 bps
Hit
AL023881.24 - 35579 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 100 bps)
Best alignment cartoon

Alternate alignments

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