<=>End overlap alignment

Alignment #1 HSP: 165 bps / non-identical: 165 bps

Full alignment

C  AC154578.2	31534	CCAGCCGGGCATGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCAG	31485
			||||| ||||||||||||||||||||||||||||||||||| ||||||||
  AC154735.2	224182	CCAGCAGGGCATGGTGGCACACGCCTTTAATCCCAGCACTCAGGAGGCAG	224231

C  AC154578.2	31484	AGGCAGGGGGATTTCTGAGTTTGAGGCCAGCCTGATCTACAGAGTGAGTT	31435
			||||||| ||||||||||||| |||||||||||| |||||| ||||||||
  AC154735.2	224232	AGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT	224281

C  AC154578.2	31434	CCAGGACAGCCAGGGCTACATAGAGAAACCCTGTCTCGAAAAACCAAAAA	31385
			||||||||  |||||||||| |||||||| |||||| |||||||  ||||
  AC154735.2	224282	CCAGGACAT-CAGGGCTACACAGAGAAACACTGTCTTGAAAAAC--AAAA	224328

C  AC154578.2	31384	AAAAAAAAAAAAAGA	31370
			||| ||| |||||||
  AC154735.2	224329	AAACAAACAAAAAGA	224343

Overview

Query
AC154578.2 - 203029 bps
Hit
AC154735.2 - 224440 bps
Total alignments
21
Best alignment
alignment #1 (HSP: 165 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
190.741131653137031534-12241822243431
288.52317551239136496486-128314334121
388.7132015111113777118887128318334051
487.142963503298315103346-128348334101
588.6631255068148114153181-128348334121
690.34309346701419618865-128731334121
789.853915582797520103346163770697101
894.05469459279057396499163784697571
994.3347355925113760119684-163784697571
1094.8484959761340819383163787697581
1189.6538995848147334153181163796697101
1295.83543864171132701196861977291041791
1396.31535862559057296826-1979101041791
1494.41481759881339519382-1982351041891
1590.13919583397508103340-1982881041951
1690.0138755842147334153175-1982881041651
1791.82432337211629611966711493681527241
1891.86244633901340216791-11493681527441
1991.59242433929057393964-11493681527441
2089.462199333197534100864-11493681527321
2189.5722153382147329150710-11493711527361
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