ChromoView - clone / Assembly sequencing status

Human: Sub region UNPL_4 (TPF updated: 2014-11-24)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-417J8
Hschr4_random_ctg4
CONTAINER
bA417J8
EPN details
AL583842.40
finished
2
Hschr4_random_ctg4
CONTAINED
KF455032
KF455032.1
finished
1 RP11-417J8
Hschr4_random_ctg4
CONTAINER
bA417J8
EPN details
AL583842.40
finished
3 WI2-679O21
Hschr4_random_ctg4
fW679O21
EPN details
CR589946.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 174060 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AL583842.40 1 174060 +
174061 174403 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 KF455032.1 1 343 -
174404 195588 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AL583842.40 174404 195588 +
195589 209709 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 CR589946.2 2001 16121 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-417J8
Hschr4_random_ctg4
CONTAINER
bA417J8
EPN details
Submitted to EMBL
12-JAN-09
AL583842.40
finished
195588 RPCI-11.2 3' / 3'
174060 / 343
21185 / -
343
0.29
Identified
2014-11-12
fetch_ncbi...
humpub
 
2
Hschr4_random_ctg4
CONTAINED
KF455032
-
-
KF455032.1
finished
343 - 5' / 5'
1 / 174404
- / 174060
343
0.29
Identified
2014-11-12
fetch_ncbi...
humpub
 
1 RP11-417J8
Hschr4_random_ctg4
CONTAINER
bA417J8
EPN details
Submitted to EMBL
12-JAN-09
AL583842.40
finished
195588 RPCI-11.2 3' / 5'
195588 / 2001
- / -
2000
0
Identified
2014-11-12
fetch_ncbi...
humpub
 
3 WI2-679O21
Hschr4_random_ctg4
fW679O21
EPN details
Analysed
11-AUG-04
CR589946.2
finished
16121 Whitehead fosmid        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
343
Total finished length of fin clones w/ overlap
212,052
Total finished length of fin clones w/o overlap
211,709
Total overlap length of fin+unfin clones
343
Total finished length of fin+unfin clones w/ overlap
212,052
Total finished length of fin+unfin clones w/o overlap
211,709

Dovetails

# rank accession status length date
1 1 AL583842.40 unfinished 21,185 Mon, 24 Nov 2014 23:43

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* quick link - http://q.sanger.ac.uk/7v7km46d