ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-I_17 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH73-313G15
Drchr17_MHC-I_FPC_ctg1683
zH313G15
EPN details
FP016238.6
finished
2 CH73-93A6
Drchr17_MHC-I_FPC_ctg1683
zH93A6
EPN details
FP016146.8
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 96532 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP016238.6 1 96532 +
96533 187991 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP016146.8 1 91459 -

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH73-313G15
Drchr17_MHC-I_FPC_ctg1683
zH313G15
EPN details
Analysed
29-APR-09
FP016238.6
finished
96532 CHORI-73 3' / 3'
96532 / 91459
- / -
9279
0.02
Identified
2014-08-01
fetch_ncbi...
humpub
 
2 CH73-93A6
Drchr17_MHC-I_FPC_ctg1683
zH93A6
EPN details
Analysed
29-JAN-09
FP016146.8
finished
100740 CHORI-73        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
9,279
Total finished length of fin clones w/ overlap
197,272
Total finished length of fin clones w/o overlap
187,993
Total overlap length of fin+unfin clones
9,279
Total finished length of fin+unfin clones w/ overlap
197,272
Total finished length of fin+unfin clones w/o overlap
187,993

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Other links

* quick link - http://q.sanger.ac.uk/fv7piw5d