ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-V_16 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH73-124G13
Drchr16_MHC-V_FPC_ctg1649
zH124G13
EPN details
FP016247.6
finished
2 CH73-343G19
Drchr16_MHC-V_FPC_ctg1649
zH343G19
EPN details
FP085399.4
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 135761 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP016247.6 10477 146237 -
135762 250343 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP085399.4 1 114582 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH73-124G13
Drchr16_MHC-V_FPC_ctg1649
zH124G13
EPN details
Analysed
13-JAN-09
FP016247.6
finished
146237 CHORI-73 5' / 5'
10477 / 1
- / -
10476
0.34
Identified
2014-10-31
fetch_ncbi...
humpub
 
2 CH73-343G19
Drchr16_MHC-V_FPC_ctg1649
zH343G19
EPN details
Analysed
23-MAY-09
FP085399.4
finished
114582 CHORI-73        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
10,476
Total finished length of fin clones w/ overlap
260,819
Total finished length of fin clones w/o overlap
250,343
Total overlap length of fin+unfin clones
10,476
Total finished length of fin+unfin clones w/ overlap
260,819
Total finished length of fin+unfin clones w/o overlap
250,343

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