ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-II_16 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH73-382H2
Drchr16_MHC-II_FPC_ctg1598
zH382H2
EPN details
FP102086.5
finished
2 CH73-22O18
Drchr16_MHC-II_FPC_ctg1598
zH22O18
EPN details
FP016207.8
finished
3 CH73-132B11
Drchr16_MHC-II_FPC_ctg1598
zH132B11
EPN details
FP085391.6
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 96718 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 FP102086.5 1 96718 +
96719 101718 2 N 5000 No overlap in database    
101719 227720 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 FP016207.8 1 126002 +
227721 232720 4 N 5000 No overlap in database    
232721 332056 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 FP085391.6 1 99336 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH73-382H2
Drchr16_MHC-II_FPC_ctg1598
zH382H2
EPN details
Analysed
11-JUL-09
FP102086.5
finished
96718 CHORI-73        
2 CH73-22O18
Drchr16_MHC-II_FPC_ctg1598
zH22O18
EPN details
Analysed
30-JUN-09
FP016207.8
finished
126002 CHORI-73        
3 CH73-132B11
Drchr16_MHC-II_FPC_ctg1598
zH132B11
EPN details
Analysed
03-JUN-09
FP085391.6
finished
99336 CHORI-73        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
322,056
Total finished length of fin clones w/o overlap
322,056
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
322,056
Total finished length of fin+unfin clones w/o overlap
322,056

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Other links

* quick link - http://q.sanger.ac.uk/fc7eurno