ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-I_6 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH73-194H10
Drchr6_MHC-I_FPC_ctg563
zH194H10
EPN details
FP016006.9
finished
2 CH73-14H10
Drchr6_MHC-I_FPC_ctg563
zH14H10
EPN details
FP101882.5
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 75794 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP016006.9 1 75794 +
75795 169773 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP101882.5 48576 142554 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH73-194H10
Drchr6_MHC-I_FPC_ctg563
zH194H10
EPN details
Analysed
14-FEB-14
FP016006.9
finished
75794 CHORI-73 3' / 5'
75794 / 48576
- / -
48573
0
Identified
2014-10-25
agp2oracle
humpub
 
2 CH73-14H10
Drchr6_MHC-I_FPC_ctg563
zH14H10
EPN details
Analysed
28-MAY-09
FP101882.5
finished
142554 CHORI-73        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
48,573
Total finished length of fin clones w/ overlap
218,348
Total finished length of fin clones w/o overlap
169,775
Total overlap length of fin+unfin clones
48,573
Total finished length of fin+unfin clones w/ overlap
218,348
Total finished length of fin+unfin clones w/o overlap
169,775

Dovetails

# rank accession status length date
1 1 FP016006.9 unfinished 27,220 Sat, 25 Oct 2014 03:16

Search

Search Project, Accession or International clone name:

Select region

Other links

* quick link - http://q.sanger.ac.uk/ytbxhfv3