ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-IV_5 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH73-262B19
Drchr5_MHC-IV_FPC_ctg502
zH262B19
EPN details
FP016250.10
finished
2 CH1073-510F5
Drchr5_MHC-IV_FPC_ctg502
zFD510F5
EPN details
FP101879.3
finished
3 CH1073-363C19
Drchr5_MHC-IV_FPC_ctg502
zFD363C19
EPN details
FP074859.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 124349 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 FP016250.10 1 124349 +
124350 129349 2 N 5000 No overlap in database    
129350 167741 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 FP101879.3 1 38392 +
167742 172741 4 N 5000 No overlap in database    
172742 216231 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 FP074859.3 1 43490 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH73-262B19
Drchr5_MHC-IV_FPC_ctg502
zH262B19
EPN details
Analysed
07-JUL-09
FP016250.10
finished
124349 CHORI-73        
2 CH1073-510F5
Drchr5_MHC-IV_FPC_ctg502
zFD510F5
EPN details
Cancelled
22-SEP-09
FP101879.3
finished
38392 CHORI1073        
3 CH1073-363C19
Drchr5_MHC-IV_FPC_ctg502
zFD363C19
EPN details
Analysed
25-MAR-09
FP074859.3
finished
43490 CHORI1073        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
206,231
Total finished length of fin clones w/o overlap
206,231
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
206,231
Total finished length of fin+unfin clones w/o overlap
206,231

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Other links

* quick link - http://q.sanger.ac.uk/8i8ngvp0