ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-I_5 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH73-195I19
Drchr5_MHC-I_FPC_ctg435
zH195I19
EPN details
FP015972.7
finished
2 CH73-275D11
Drchr5_MHC-I_FPC_ctg435
zH275D11
EPN details
FP017198.18
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 100539 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP015972.7 1 100539 +
100540 187160 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 FP017198.18 1 86621 -

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH73-195I19
Drchr5_MHC-I_FPC_ctg435
zH195I19
EPN details
Analysed
28-MAR-09
FP015972.7
finished
100539 CHORI-73 3' / 3'
100539 / 86621
- / -
11143
0
Identified
2014-09-02
fetch_ncbi...
humpub
 
2 CH73-275D11
Drchr5_MHC-I_FPC_ctg435
zH275D11
EPN details
Analysed
21-OCT-09
FP017198.18
finished
97764 CHORI-73        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
11,143
Total finished length of fin clones w/ overlap
198,303
Total finished length of fin clones w/o overlap
187,160
Total overlap length of fin+unfin clones
11,143
Total finished length of fin+unfin clones w/ overlap
198,303
Total finished length of fin+unfin clones w/o overlap
187,160

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Other links

* quick link - http://q.sanger.ac.uk/t7ftq78v