ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region MHC-I_4 (TPF updated: 2009-01-09)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH1073-410J4
Drchr4_MHC-I_FPC_ctg2982
zFD410J4
EPN details
FP016060.5
finished
2 CH1073-203N19
Drchr4_MHC-I_FPC_ctg2982
zFD203N19
EPN details
FP016020.7
finished
3 CH73-389K6
Drchr4_MHC-I_FPC_ctg2982
zH389K6
EPN details
FP085412.9
finished
4 CH73-158P21
Drchr4_MHC-I_FPC_ctg2982
zH158P21
EPN details
FP074874.8
finished
5 CH1073-398C20
Drchr4_MHC-I_FPC_ctg2982
zFD398C20
EPN details
FP085389.3
finished

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH1073-410J4
Drchr4_MHC-I_FPC_ctg2982
zFD410J4
EPN details
Analysed
18-FEB-14
FP016060.5
finished
16510 CHORI1073 3' / 5'
16510 / 7368
- / -
7367
0
Identified
2014-04-09
find_overl...
humpub
 
2 CH1073-203N19
Drchr4_MHC-I_FPC_ctg2982
zFD203N19
EPN details
Analysed
13-FEB-09
FP016020.7
finished
33688 CHORI1073 3' / 5'
15223 / 1
- / -
18441
0.13
Identified
2014-04-09
fetch_ncbi...
humpub
 
3 CH73-389K6
Drchr4_MHC-I_FPC_ctg2982
zH389K6
EPN details
Analysed
07-MAY-09
FP085412.9
finished
106672 CHORI-73 3' / 3'
37460 / 112249
- / -
69212
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
4 CH73-158P21
Drchr4_MHC-I_FPC_ctg2982
zH158P21
EPN details
Analysed
07-MAY-09
FP074874.8
finished
112249 CHORI-73 5' / 3'
5957 / 36381
- / -
5956
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
5 CH1073-398C20
Drchr4_MHC-I_FPC_ctg2982
zFD398C20
EPN details
Analysed
20-JAN-09
FP085389.3
finished
36381 CHORI1073        

Statistics

Clone Summary

Number of gaps
0
Total clones
5
Clone HTGS Phases
finished
5
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
100,976
Total finished length of fin clones w/ overlap
305,500
Total finished length of fin clones w/o overlap
204,524
Total overlap length of fin+unfin clones
100,976
Total finished length of fin+unfin clones w/ overlap
305,500
Total finished length of fin+unfin clones w/o overlap
204,524

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Other links

* quick link - http://q.sanger.ac.uk/qjyq77h6