ChromoView - clone / Assembly sequencing status

Human: Sub region LRC_COX_2 (TPF updated: 2008-03-11)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH502-403H19
chr19_lrc_cox_ctg2
bCX403H19
EPN details
CU467018.4
finished
  GAP (type-4) length 5000 bps    
3 CH502-195L8
chr19_lrc_cox_ctg2
bCX195L8
EPN details
CU459006.1
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 137463 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 CU467018.4 1 137463 +
137464 142463 2 N 5000 contig no
142464 322103 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 CU459006.1 1 179640 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH502-403H19
chr19_lrc_cox_ctg2
bCX403H19
EPN details
Submitted to EMBL
12-JAN-09
CU467018.4
finished
137463 CHORI-502        
  GAP (type-4) length 5000 bps                  
3 CH502-195L8
chr19_lrc_cox_ctg2
bCX195L8
EPN details
Submitted to EMBL
12-JAN-09
CU459006.1
finished
179640 CHORI-502        

Statistics

Clone Summary

Number of gaps
1
Gap types
type-4
1
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
317,103
Total finished length of fin clones w/o overlap
317,103
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
317,103
Total finished length of fin+unfin clones w/o overlap
317,103

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Other links

* quick link - http://q.sanger.ac.uk/hk7aduw4