ChromoView - clone / Assembly sequencing status

Mouse: Sub region NOD_IDD1 (TPF updated: 2008-04-04)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 DN-238O11
chr17_NOD_IDD1
bQ238O11
EPN details
CU463309.10
finished
2 DN-167C17
chr17_NOD_IDD1
bQ167C17
EPN details
CU468137.5
finished
3 DN-28J7
chr17_NOD_IDD1
bQ28J7
EPN details
CU463333.16
finished
4 DN-168K18
chr17_NOD_IDD1
bQ168K18
EPN details
CU468138.7
finished
5 DN-73C12
chr17_NOD_IDD1
bQ73C12
EPN details
CU463313.11
finished
6 DN-191L19
chr17_NOD_IDD1
bQ191L19
EPN details
CU463834.5
finished
7 DN-77H20
chr17_NOD_IDD1
bQ77H20
EPN details
CU468015.2
finished
8 DN-83D6
chr17_NOD_IDD1
bQ83D6
EPN details
CU463341.5
finished
9 DN-259L18
chr17_NOD_IDD1
bQ259L18
EPN details
CU463176.7
finished
10 DN-105D23
chr17_NOD_IDD1
bQ105D23
EPN details
CU463845.12
finished
11 DN-103F12
chr17_NOD_IDD1
bQ103F12
EPN details
CU466548.15
finished
12 DN-88D14
chr17_NOD_IDD1
bQ88D14
EPN details
CU464136.6
finished
13 DN-227C10
chr17_NOD_IDD1
bQ227C10
EPN details
CU463307.7
finished
14 DN-261D14
chr17_NOD_IDD1
bQ261D14
EPN details
CU463831.7
finished
15 DN-230K3
chr17_NOD_IDD1
bQ230K3
EPN details
CU463153.7
finished
16 DN-109I8
chr17_NOD_IDD1
bQ109I8
EPN details
CU467817.5
finished
17 DN-206C12
chr17_NOD_IDD1
bQ206C12
EPN details
CU463331.8
finished
18 DN-522D15
chr17_NOD_IDD1
bQ522D15
EPN details
CU468049.4
finished
19 DN-523J14
chr17_NOD_IDD1
bQ523J14
EPN details
CU463853.8
finished
20 DN-156L13
chr17_NOD_IDD1
bQ156L13
EPN details
CU466552.10
finished
21 DN-197F11
chr17_NOD_IDD1
bQ197F11
EPN details
CU463328.8
finished
22 DN-370F8
chr17_NOD_IDD1
bQ370F8
EPN details
CU463312.6
finished
23 DN-260G2
chr17_NOD_IDD1
bQ260G2
EPN details
CU463830.6
finished
24 DN-346M17
chr17_NOD_IDD1
bQ346M17
EPN details
CU463329.5
finished
25 DN-195M13
chr17_NOD_IDD1
bQ195M13
EPN details
CU463842.6
finished
26 DN-31B13
chr17_NOD_IDD1
bQ31B13
EPN details
CU463334.13
finished
27 DN-24N5
chr17_NOD_IDD1
bQ24N5
EPN details
CU463310.10
finished
28 DN-35K21
chr17_NOD_IDD1
bQ35K21
EPN details
CU463311.16
finished
29 DN-110O14
chr17_NOD_IDD1
bQ110O14
EPN details
CU463351.10
finished
30 DN-100C14
chr17_NOD_IDD1
bQ100C14
EPN details
CU463346.12
finished
31 DN-444K2
chr17_NOD_IDD1
bQ444K2
EPN details
CU468124.3
finished
32 DN-87J6
chr17_NOD_IDD1
bQ87J6
EPN details
CU463330.8
finished
33 DN-456C13
chr17_NOD_IDD1
bQ456C13
EPN details
CU570767.2
finished
34 DN-140F11
chr17_NOD_IDD1
bQ140F11
EPN details
CU467613.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 208736 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463309.10 1 208736 +
208737 250014 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU468137.5 2001 43278 +
250015 452324 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463333.16 2001 204310 +
452325 634113 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU468138.7 2001 183789 +
634114 701929 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463313.11 2001 69816 +
701930 936889 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463834.5 2001 236960 +
936890 983392 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU468015.2 2001 48503 +
983393 1089466 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463341.5 2001 108074 +
1089467 1234308 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463176.7 2001 146842 +
1234309 1406669 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463845.12 2001 174361 +
1406670 1533019 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU466548.15 2001 128350 +
1533020 1686467 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU464136.6 2001 155448 +
1686468 1777175 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463307.7 2001 92708 +
1777176 1919776 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463831.7 2001 144601 +
1919777 2081591 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463153.7 2665 164479 +
2081592 2156947 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU467817.5 2001 77356 +
2156948 2311411 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463331.8 2001 156464 +
2311412 2327879 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU468049.4 2001 18468 +
2327880 2494528 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463853.8 2001 168649 +
2494529 2596842 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU466552.10 2001 104314 +
2596843 2734122 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463328.8 2001 139280 +
2734123 2834900 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463312.6 2001 102778 +
2834901 2982071 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463830.6 2001 149171 +
2982072 3029374 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463329.5 2001 49303 +
3029375 3192214 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463842.6 2001 164840 +
3192215 3309244 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463334.13 2001 119030 +
3309245 3421203 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463310.10 2001 113959 +
3421204 3622790 28 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463311.16 2001 203587 +
3622791 3760139 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463351.10 2001 139349 +
3760140 3900268 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463346.12 2001 142129 +
3900269 3902262 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU468124.3 2001 3994 +
3902263 4060308 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU463330.8 1 158046 -
4060309 4091776 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU570767.2 2001 33468 +
4091777 4256209 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 34 CU467613.3 2001 166433 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 DN-238O11
chr17_NOD_IDD1
bQ238O11
EPN details
Analysed
17-NOV-07
CU463309.10
finished
208736 DIL NOD 3' / 5'
208736 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
2 DN-167C17
chr17_NOD_IDD1
bQ167C17
EPN details
Analysed
10-OCT-07
CU468137.5
finished
43278 DIL NOD 3' / 5'
43278 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
3 DN-28J7
chr17_NOD_IDD1
bQ28J7
EPN details
Analysed
05-MAR-08
CU463333.16
finished
204310 DIL NOD 3' / 5'
204310 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
4 DN-168K18
chr17_NOD_IDD1
bQ168K18
EPN details
Analysed
19-DEC-07
CU468138.7
finished
183789 DIL NOD 3' / 5'
183789 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
5 DN-73C12
chr17_NOD_IDD1
bQ73C12
EPN details
Analysed
11-DEC-07
CU463313.11
finished
69816 DIL NOD 3' / 5'
69816 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
6 DN-191L19
chr17_NOD_IDD1
bQ191L19
EPN details
Analysed
28-SEP-07
CU463834.5
finished
236960 DIL NOD 3' / 5'
236960 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
7 DN-77H20
chr17_NOD_IDD1
bQ77H20
EPN details
Analysed
07-SEP-07
CU468015.2
finished
48503 DIL NOD 3' / 5'
48503 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
8 DN-83D6
chr17_NOD_IDD1
bQ83D6
EPN details
Analysed
09-OCT-07
CU463341.5
finished
108074 DIL NOD 3' / 5'
108074 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
9 DN-259L18
chr17_NOD_IDD1
bQ259L18
EPN details
Analysed
14-AUG-07
CU463176.7
finished
146842 DIL NOD 3' / 5'
146842 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
10 DN-105D23
chr17_NOD_IDD1
bQ105D23
EPN details
Analysed
12-SEP-07
CU463845.12
finished
174361 DIL NOD 3' / 5'
174361 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
11 DN-103F12
chr17_NOD_IDD1
bQ103F12
EPN details
Analysed
28-NOV-07
CU466548.15
finished
128350 DIL NOD 3' / 5'
128350 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
12 DN-88D14
chr17_NOD_IDD1
bQ88D14
EPN details
Analysed
31-AUG-07
CU464136.6
finished
155448 DIL NOD 3' / 5'
155448 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
13 DN-227C10
chr17_NOD_IDD1
bQ227C10
EPN details
Analysed
06-SEP-07
CU463307.7
finished
92708 DIL NOD 3' / 5'
92708 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
14 DN-261D14
chr17_NOD_IDD1
bQ261D14
EPN details
Analysed
12-SEP-07
CU463831.7
finished
144601 DIL NOD 3' / 5'
144601 / 2665
- / -
2664
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
15 DN-230K3
chr17_NOD_IDD1
bQ230K3
EPN details
Analysed
14-AUG-07
CU463153.7
finished
164479 DIL NOD 3' / 5'
164479 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
16 DN-109I8
chr17_NOD_IDD1
bQ109I8
EPN details
Analysed
12-OCT-07
CU467817.5
finished
77356 DIL NOD 3' / 5'
77356 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
17 DN-206C12
chr17_NOD_IDD1
bQ206C12
EPN details
Analysed
22-SEP-07
CU463331.8
finished
156464 DIL NOD 3' / 5'
156464 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
18 DN-522D15
chr17_NOD_IDD1
bQ522D15
EPN details
Analysed
16-OCT-07
CU468049.4
finished
18468 DIL NOD 3' / 5'
18468 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
19 DN-523J14
chr17_NOD_IDD1
bQ523J14
EPN details
Analysed
09-OCT-07
CU463853.8
finished
168649 DIL NOD 3' / 5'
168649 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
20 DN-156L13
chr17_NOD_IDD1
bQ156L13
EPN details
Analysed
03-OCT-07
CU466552.10
finished
104314 DIL NOD 3' / 5'
104314 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
21 DN-197F11
chr17_NOD_IDD1
bQ197F11
EPN details
Analysed
05-OCT-07
CU463328.8
finished
139280 DIL NOD 3' / 5'
139280 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
22 DN-370F8
chr17_NOD_IDD1
bQ370F8
EPN details
Analysed
07-SEP-07
CU463312.6
finished
102778 DIL NOD 3' / 5'
102778 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
23 DN-260G2
chr17_NOD_IDD1
bQ260G2
EPN details
Analysed
25-JUL-07
CU463830.6
finished
149171 DIL NOD 3' / 5'
149171 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
24 DN-346M17
chr17_NOD_IDD1
bQ346M17
EPN details
Analysed
14-AUG-07
CU463329.5
finished
49303 DIL NOD 3' / 5'
49303 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
25 DN-195M13
chr17_NOD_IDD1
bQ195M13
EPN details
Analysed
12-SEP-07
CU463842.6
finished
164840 DIL NOD 3' / 5'
164840 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
26 DN-31B13
chr17_NOD_IDD1
bQ31B13
EPN details
Analysed
09-NOV-07
CU463334.13
finished
119030 DIL NOD 3' / 5'
119030 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
27 DN-24N5
chr17_NOD_IDD1
bQ24N5
EPN details
Analysed
28-NOV-07
CU463310.10
finished
113959 DIL NOD 3' / 5'
113959 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
28 DN-35K21
chr17_NOD_IDD1
bQ35K21
EPN details
Analysed
13-OCT-07
CU463311.16
finished
203587 DIL NOD 3' / 5'
203587 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
29 DN-110O14
chr17_NOD_IDD1
bQ110O14
EPN details
Analysed
04-OCT-07
CU463351.10
finished
139349 DIL NOD 3' / 5'
139349 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
30 DN-100C14
chr17_NOD_IDD1
bQ100C14
EPN details
Analysed
17-OCT-07
CU463346.12
finished
142129 DIL NOD 3' / 5'
142129 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
31 DN-444K2
chr17_NOD_IDD1
bQ444K2
EPN details
Analysed
22-SEP-07
CU468124.3
finished
3994 DIL NOD 3' / 3'
3994 / 158046
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
32 DN-87J6
chr17_NOD_IDD1
bQ87J6
EPN details
Analysed
03-OCT-07
CU463330.8
finished
160046 DIL NOD 5' / 5'
1 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
33 DN-456C13
chr17_NOD_IDD1
bQ456C13
EPN details
Analysed
11-MAR-08
CU570767.2
finished
33468 DIL NOD 3' / 5'
33468 / 2001
- / -
2000
0
Identified
2014-08-20
fetch_ncbi...
humpub
 
34 DN-140F11
chr17_NOD_IDD1
bQ140F11
EPN details
Analysed
05-OCT-07
CU467613.3
finished
166433 DIL NOD        

Statistics

Clone Summary

Number of gaps
0
Total clones
34
Clone HTGS Phases
finished
34
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
66,664
Total finished length of fin clones w/ overlap
4,322,873
Total finished length of fin clones w/o overlap
4,256,209
Total overlap length of fin+unfin clones
66,664
Total finished length of fin+unfin clones w/ overlap
4,322,873
Total finished length of fin+unfin clones w/o overlap
4,256,209

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Other links

* quick link - http://q.sanger.ac.uk/8nm6ue51