ChromoView - clone / Assembly sequencing status

Mouse: Sub region NOD_IDD18.1 (TPF updated: 2006-11-28)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 DN-250O19
chr3_NOD_IDD18.1
bQ250O19
EPN details
CT010461.9
finished
2 DN-250A21
chr3_NOD_IDD18.1
bQ250A21
EPN details
CR936849.22
finished
3 DN-127N6
chr3_NOD_IDD18.1
bQ127N6
EPN details
CR936838.15
finished
4 DN-164L21
chr3_NOD_IDD18.1
bQ164L21
EPN details
CR938729.13
finished
5 DN-315E9
chr3_NOD_IDD18.1
bQ315E9
EPN details
CR936848.6
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 91205 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 CT010461.9 1 91205 +
91206 242288 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 CR936849.22 2001 153083 +
242289 415260 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 CR936838.15 2001 174972 +
415261 546539 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 CR938729.13 2001 133279 +
546540 689363 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 CR936848.6 2001 144824 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 DN-250O19
chr3_NOD_IDD18.1
bQ250O19
EPN details
Submitted to EMBL
13-JAN-09
CT010461.9
finished
91205 DIL NOD 3' / 5'
91205 / 2001
- / -
2000
0
Identified
2014-09-17
fetch_ncbi...
humpub
 
2 DN-250A21
chr3_NOD_IDD18.1
bQ250A21
EPN details
Submitted to EMBL
13-JAN-09
CR936849.22
finished
153083 DIL NOD 3' / 5'
153083 / 2001
- / -
2000
0
Identified
2014-09-17
fetch_ncbi...
humpub
 
3 DN-127N6
chr3_NOD_IDD18.1
bQ127N6
EPN details
Submitted to EMBL
13-JAN-09
CR936838.15
finished
174972 DIL NOD 3' / 5'
174972 / 2001
- / -
2000
0
Identified
2014-09-17
fetch_ncbi...
humpub
 
4 DN-164L21
chr3_NOD_IDD18.1
bQ164L21
EPN details
Submitted to EMBL
13-JAN-09
CR938729.13
finished
133279 DIL NOD 3' / 5'
133279 / 2001
- / -
2000
0
Identified
2014-09-17
fetch_ncbi...
humpub
 
5 DN-315E9
chr3_NOD_IDD18.1
bQ315E9
EPN details
Submitted to EMBL
13-JAN-09
CR936848.6
finished
144824 DIL NOD        

Statistics

Clone Summary

Number of gaps
0
Total clones
5
Clone HTGS Phases
finished
5
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
8,000
Total finished length of fin clones w/ overlap
697,363
Total finished length of fin clones w/o overlap
689,363
Total overlap length of fin+unfin clones
8,000
Total finished length of fin+unfin clones w/ overlap
697,363
Total finished length of fin+unfin clones w/o overlap
689,363

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Other links

* quick link - http://q.sanger.ac.uk/5ujlfgf5