ChromoView - clone / Assembly sequencing status

Mouse: Sub region NOD_IDD18.2 (TPF updated: 2006-11-25)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 DN-252N9
chr3_NOD_IDD18.2
bQ252N9
EPN details
CU210935.8
finished
2 DN-31A8
chr3_NOD_IDD18.2
bQ31A8
EPN details
CU210953.7
finished
3 DN-69P21
chr3_NOD_IDD18.2
bQ69P21
EPN details
CU210868.10
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 209098 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CU210935.8 1 209098 +
209099 325555 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CU210953.7 2001 118457 +
325556 466430 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CU210868.10 2001 142875 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 DN-252N9
chr3_NOD_IDD18.2
bQ252N9
EPN details
Submitted to EMBL
13-JAN-09
CU210935.8
finished
209098 DIL NOD 3' / 5'
209098 / 2001
- / -
2000
0
Identified
2014-09-19
fetch_ncbi...
humpub
 
2 DN-31A8
chr3_NOD_IDD18.2
bQ31A8
EPN details
Submitted to EMBL
13-JAN-09
CU210953.7
finished
118457 DIL NOD 3' / 5'
118457 / 2001
- / -
2000
0
Identified
2014-09-19
fetch_ncbi...
humpub
 
3 DN-69P21
chr3_NOD_IDD18.2
bQ69P21
EPN details
Submitted to EMBL
13-JAN-09
CU210868.10
finished
142875 DIL NOD        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
4,000
Total finished length of fin clones w/ overlap
470,430
Total finished length of fin clones w/o overlap
466,430
Total overlap length of fin+unfin clones
4,000
Total finished length of fin+unfin clones w/ overlap
470,430
Total finished length of fin+unfin clones w/o overlap
466,430

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Other links

* quick link - http://q.sanger.ac.uk/036ie4n2