ChromoView - clone / Assembly sequencing status

Human: Sub region MHC_MCF (TPF updated: 2008-09-10)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 DAMC-338N21
Hschr6_MHC_MCF_ctg1
bMC338N21
EPN details
CR936879.6
finished
  GAP (type-2) length 2902 bps    
3 DAMC-279M23
Hschr6_MHC_MCF_ctg1
bMC279M23
EPN details
CR936876.2
finished
  GAP (type-2) length 7328 bps    
5 DAMC-4K22
Hschr6_MHC_MCF_ctg1
bMC4K22
EPN details
CR936883.15
finished
  GAP (type-2) length 53599 bps    
7 DAMC-324C19
Hschr6_MHC_MCF_ctg1
bMC324C19
EPN details
CR936923.5
finished
8 DAMC-365H22
Hschr6_MHC_MCF_ctg1
bMC365H22
EPN details
CR933783.5
finished
  GAP (type-2) length 20427 bps    
10 DAMC-220I8
Hschr6_MHC_MCF_ctg1
bMC220I8
EPN details
CR759834.8
finished
  GAP (type-2) length 68831 bps    
12 DAMC-22P6
Hschr6_MHC_MCF_ctg1
bMC22P6
EPN details
CR933842.5
finished
13 DAMC-143C14
Hschr6_MHC_MCF_ctg1
bMC143C14
EPN details
CR759808.2
finished
  GAP (type-2) length 8989 bps    
15 DAMC-143I21
Hschr6_MHC_MCF_ctg1
bMC143I21
EPN details
CR759768.2
finished
16 DAMC-346D16
Hschr6_MHC_MCF_ctg1
bMC346D16
EPN details
CR942274.1
finished
17 DAMA-177C8
Hschr6_MHC_MCF_ctg1
Cl/Pr bMA177C8/bMC177C8 swap
EPN details
CR759766.5
finished
18 DAMC-335E20
Hschr6_MHC_MCF_ctg1
bMC335E20
EPN details
CR759790.7
finished
  GAP (type-2) length 15046 bps    
20 DAMC-149H2
Hschr6_MHC_MCF_ctg1
bMC149H2
EPN details
CR788234.4
finished
21 DAMC-101F5
Hschr6_MHC_MCF_ctg1
bMC101F5
EPN details
CT009517.12
finished
  GAP (type-2) length 114461 bps    
23 DAMC-190N15
Hschr6_MHC_MCF_ctg1
bMC190N15
EPN details
CR759762.5
finished
24 DAMC-182C13
Hschr6_MHC_MCF_ctg1
bMC182C13
EPN details
CR759763.2
finished
25 DAMC-153M24
Hschr6_MHC_MCF_ctg1
bMC153M24
EPN details
CR759801.4
finished
26 DAMC-72C9
Hschr6_MHC_MCF_ctg1
bMC72C9
EPN details
CR759838.4
finished
  GAP (type-2) length 163747 bps    
28 DAMC-170D7
Hschr6_MHC_MCF_ctg1
bMC170D7
EPN details
CR759832.3
finished
  GAP (type-2) length 22337 bps    
30 DAMC-259M15
Hschr6_MHC_MCF_ctg1
bMC259M15
EPN details
CR936916.2
finished
31 DAMC-32J6
Hschr6_MHC_MCF_ctg1
bMC32J6
EPN details
CR936927.1
finished
32 DAMC-346K1
Hschr6_MHC_MCF_ctg1
bMC346K1
EPN details
CR847863.2
finished
33 DAMC-83F13
Hschr6_MHC_MCF_ctg1
bMC83F13
EPN details
CR759778.8
finished
34 XX-BMC83F13_BMC316D20
Hschr6_MHC_MCF_ctg1
Cl/Pr BMC83F13_BMC316D20/bMC83F13_bMC316D20 swap
EPN details
CU013522.1
finished
35 DAMC-316D20
Hschr6_MHC_MCF_ctg1
bMC316D20
EPN details
CR788240.3
finished
  GAP (type-2) length 97959 bps    
37 DAMC-325F20
Hschr6_MHC_MCF_ctg1
bMC325F20
EPN details
CR942271.10
finished
  GAP (type-2) length 10174 bps    
39 DAMC-336H8
Hschr6_MHC_MCF_ctg1
bMC336H8
EPN details
CR936875.3
finished
  GAP (type-2) length 4797 bps    
41 DAMC-192G6
Hschr6_MHC_MCF_ctg1
bMC192G6
EPN details
CR759772.4
finished
42 DAMC-11N4
Hschr6_MHC_MCF_ctg1
bMC11N4
EPN details
CR759805.5
finished
43 DAMC-257B19
Hschr6_MHC_MCF_ctg1
bMC257B19
EPN details
CR936880.3
finished
44 DAMC-338G21
Hschr6_MHC_MCF_ctg1
bMC338G21
EPN details
CR938714.3
finished
45 DAMC-88G10
Hschr6_MHC_MCF_ctg1
bMC88G10
EPN details
CR759815.3
finished
46 DAMC-118J7
Hschr6_MHC_MCF_ctg1
Cl/Pr bMC118J7/bMA291K3 swap
EPN details
CR933862.6
finished
47 DAMC-153L10
Hschr6_MHC_MCF_ctg1
bMC153L10
EPN details
CR759828.5
finished
  GAP (type-2) length 99452 bps    
49 DAMA-190B12
Hschr6_MHC_MCF_ctg1
Cl/Pr bMA190B12/bMC190B12 swap
EPN details
CR753864.4
finished
50 DAMC-81L12
Hschr6_MHC_MCF_ctg1
bMC81L12
EPN details
CR942185.8
finished
  GAP (type-2) length 11423 bps    
52 DAMC-157M7
Hschr6_MHC_MCF_ctg1
bMC157M7
EPN details
CR759761.9
finished
53 DAMC-117B11
Hschr6_MHC_MCF_ctg1
bMC117B11
EPN details
CR759787.4
finished
  GAP (type-2) length 34221 bps    
55 DAMC-303C24
Hschr6_MHC_MCF_ctg1
bMC303C24
EPN details
CR759784.6
finished
56 DAMC-178C20
Hschr6_MHC_MCF_ctg1
bMC178C20
EPN details
CR759782.7
finished
  GAP (type-2) length 25852 bps    
58 DAMC-258G8
Hschr6_MHC_MCF_ctg1
bMC258G8
EPN details
CR936924.2
finished
59 DAMC-407K20
Hschr6_MHC_MCF_ctg1
bMC407K20
EPN details
CR936882.4
finished
60 DAMC-284F20
Hschr6_MHC_MCF_ctg1
bMC284F20
EPN details
CR759792.3
finished
61 DAMC-327B5
Hschr6_MHC_MCF_ctg1
bMC327B5
EPN details
CR925796.6
finished
62 DAMC-108L3
Hschr6_MHC_MCF_ctg1
bMC108L3
EPN details
CR933878.7
finished
63 DAMC-278C20
Hschr6_MHC_MCF_ctg1
bMC278C20
EPN details
CR938720.8
finished
  GAP (type-2) length 56338 bps    
65 DAMC-185H11
Hschr6_MHC_MCF_ctg1
bMC185H11
EPN details
CR759773.4
finished
66 DAMC-16P5
Hschr6_MHC_MCF_ctg1
bMC16P5
EPN details
CR759779.6
finished
67 DAMC-146E17
Hschr6_MHC_MCF_ctg1
bMC146E17
EPN details
CR788250.6
finished
  GAP (type-2) length 30555 bps    
69 DAMC-134I7
Hschr6_MHC_MCF_ctg1
bMC134I7
EPN details
CR933859.5
finished
70 DAMC-176M21
Hschr6_MHC_MCF_ctg1
bMC176M21
EPN details
CR759848.2
finished
71 DAMC-27I8
Hschr6_MHC_MCF_ctg1
bMC27I8
EPN details
CT009502.2
finished
  GAP (type-2) length 47 bps    
73 DAMC-219D2
Hschr6_MHC_MCF_ctg1
bMC219D2
EPN details
CR933844.2
finished
74 DAMC-226H3
Hschr6_MHC_MCF_ctg1
bMC226H3
EPN details
CR759798.3
finished
  GAP (type-2) length 17921 bps    
76 DAMC-206D4
Hschr6_MHC_MCF_ctg1
bMC206D4
EPN details
CR759795.4
finished
  GAP (type-2) length 172081 bps    
78 DAMC-269O2
Hschr6_MHC_MCF_ctg1
bMC269O2
EPN details
CR936877.4
finished
79 DAMC-227D19
Hschr6_MHC_MCF_ctg1
bMC227D19
EPN details
CR759786.5
finished
80 DAMC-283P18
Hschr6_MHC_MCF_ctg1
bMC283P18
EPN details
CR759793.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 44479 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 CR936879.6 1 44479 +
44480 47381 2 N 2902 contig yes
47382 88767 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 CR936876.2 1 41386 +
88768 96095 4 N 7328 contig yes
96096 138471 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 CR936883.15 1 42376 +
138472 192070 6 N 53599 contig yes
192071 243301 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 8 CR936923.5 1 51231 +
243302 293326 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 8 CR933783.5 2001 52025 +
293327 313753 9 N 20427 contig yes
313754 400928 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 10 CR759834.8 1 87175 +
400929 469759 11 N 68831 contig yes
469760 482973 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 13 CR933842.5 1 13214 +
482974 585937 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 13 CR759808.2 2001 104964 +
585938 594926 14 N 8989 contig yes
594927 718678 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 18 CR759768.2 1 123752 +
718679 736306 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 18 CR942274.1 2001 19628 +
736307 861586 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 18 CR759766.5 2001 127280 +
861587 903588 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 18 CR759790.7 2001 44002 +
903589 918634 19 N 15046 contig yes
918635 1005488 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 21 CR788234.4 1 86854 +
1005489 1087097 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 21 CT009517.12 1001 82609 +
1087098 1201558 22 N 114461 contig yes
1201559 1241630 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 26 CR759762.5 1 40072 +
1241631 1350133 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 26 CR759763.2 2001 110503 +
1350134 1369366 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 26 CR759801.4 2001 21233 +
1369367 1472290 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 26 CR759838.4 2001 104924 +
1472291 1636037 27 N 163747 contig yes
1636038 1725107 28 FClick to retrieve finished assembled sequence in green bar: rank(s) 28 - 28 CR759832.3 1 89070 +
1725108 1747444 29 N 22337 contig yes
1747445 1773416 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 35 CR936916.2 1 25972 +
1773417 1816199 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 35 CR936927.1 2001 44783 +
1816200 1836243 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 35 CR847863.2 2001 22044 +
1836244 1923058 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 35 CR759778.8 2001 88815 +
1923059 1925512 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 35 CU013522.1 876 3329 +
1925513 2000537 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 35 CR788240.3 50 75074 +
2000538 2098496 36 N 97959 contig yes
2098497 2151162 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 37 CR942271.10 1 52666 +
2151163 2161336 38 N 10174 contig yes
2161337 2210188 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 39 CR936875.3 1 48852 +
2210189 2214985 40 N 4797 contig yes
2214986 2326135 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR759772.4 1 111150 +
2326136 2380944 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR759805.5 2001 56809 +
2380945 2385754 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR936880.3 2001 6810 +
2385755 2394417 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR938714.3 1940 10602 +
2394418 2495199 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR759815.3 2001 102782 +
2495200 2520968 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR933862.6 2001 27769 +
2520969 2621789 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 47 CR759828.5 2001 102821 +
2621790 2721241 48 N 99452 contig yes
2721242 2803433 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 50 CR753864.4 1 82192 +
2803434 2856914 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 50 CR942185.8 2001 55481 +
2856915 2868337 51 N 11423 contig yes
2868338 2952186 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 53 CR759761.9 1 83849 +
2952187 3063836 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 53 CR759787.4 2001 113650 +
3063837 3098057 54 N 34221 contig yes
3098058 3161185 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 56 CR759784.6 1 63128 +
3161186 3239010 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 56 CR759782.7 2001 79825 +
3239011 3264862 57 N 25852 contig yes
3264863 3306993 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 63 CR936924.2 1 42131 +
3306994 3310577 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 63 CR936882.4 2001 5584 +
3310578 3353739 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 63 CR759792.3 2001 45162 +
3353740 3389043 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 63 CR925796.6 2001 37304 +
3389044 3489950 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 63 CR933878.7 2001 102907 +
3489951 3512279 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 63 CR938720.8 2001 24329 +
3512280 3568617 64 N 56338 contig yes
3568618 3685839 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 CR759773.4 1 117222 +
3685840 3722429 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 CR759779.6 2001 38590 +
3722430 3808632 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 CR788250.6 2001 88203 +
3808633 3839187 68 N 30555 contig yes
3839188 3922869 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 71 CR933859.5 1 83682 +
3922870 4025750 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 71 CR759848.2 2001 104881 +
4025751 4058917 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 71 CT009502.2 2001 35167 +
4058918 4058964 72 N 47 contig yes
4058965 4077283 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 74 CR933844.2 1 18319 +
4077284 4193691 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 74 CR759798.3 2001 118408 +
4193692 4211612 75 N 17921 contig yes
4211613 4331510 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 76 - 76 CR759795.4 1 119898 +
4331511 4503591 77 N 172081 contig yes
4503592 4554153 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 78 - 80 CR936877.4 1 50562 +
4554154 4675552 79 FClick to retrieve finished assembled sequence in green bar: rank(s) 78 - 80 CR759786.5 2001 123399 +
4675553 4742736 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 78 - 80 CR759793.3 2001 69184 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 DAMC-338N21
Hschr6_MHC_MCF_ctg1
bMC338N21
EPN details
Submitted to EMBL
12-JAN-09
CR936879.6
finished
44479 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 2902 bps                  
3 DAMC-279M23
Hschr6_MHC_MCF_ctg1
bMC279M23
EPN details
Submitted to EMBL
12-JAN-09
CR936876.2
finished
41386 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 7328 bps                  
5 DAMC-4K22
Hschr6_MHC_MCF_ctg1
bMC4K22
EPN details
Submitted to EMBL
12-JAN-09
CR936883.15
finished
42376 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 53599 bps                  
7 DAMC-324C19
Hschr6_MHC_MCF_ctg1
bMC324C19
EPN details
Submitted to EMBL
12-JAN-09
CR936923.5
finished
51231 DNA-Arts.org BAC library MCF.1 3' / 5'
51231 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
8 DAMC-365H22
Hschr6_MHC_MCF_ctg1
bMC365H22
EPN details
Submitted to EMBL
12-JAN-09
CR933783.5
finished
52025 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 20427 bps                  
10 DAMC-220I8
Hschr6_MHC_MCF_ctg1
bMC220I8
EPN details
Submitted to EMBL
12-JAN-09
CR759834.8
finished
87175 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 68831 bps                  
12 DAMC-22P6
Hschr6_MHC_MCF_ctg1
bMC22P6
EPN details
Submitted to EMBL
12-JAN-09
CR933842.5
finished
13214 DNA-Arts.org BAC library MCF.1 3' / 5'
13214 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
13 DAMC-143C14
Hschr6_MHC_MCF_ctg1
bMC143C14
EPN details
Submitted to EMBL
12-JAN-09
CR759808.2
finished
104964 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 8989 bps                  
15 DAMC-143I21
Hschr6_MHC_MCF_ctg1
bMC143I21
EPN details
Submitted to EMBL
12-JAN-09
CR759768.2
finished
123752 DNA-Arts.org BAC library MCF.1 3' / 5'
123752 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
16 DAMC-346D16
Hschr6_MHC_MCF_ctg1
bMC346D16
EPN details
Submitted to EMBL
12-JAN-09
CR942274.1
finished
19628 DNA-Arts.org BAC library MCF.1 3' / 5'
19628 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
17 DAMA-177C8
Hschr6_MHC_MCF_ctg1
Cl/Pr bMA177C8/bMC177C8 swap
EPN details
Submitted to EMBL
12-JAN-09
CR759766.5
finished
127280 DNA-Arts BAC library MANN.1 3' / 5'
127280 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
18 DAMC-335E20
Hschr6_MHC_MCF_ctg1
bMC335E20
EPN details
Submitted to EMBL
12-JAN-09
CR759790.7
finished
44002 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 15046 bps                  
20 DAMC-149H2
Hschr6_MHC_MCF_ctg1
bMC149H2
EPN details
Submitted to EMBL
12-JAN-09
CR788234.4
finished
86854 DNA-Arts.org BAC library MCF.1 3' / 5'
86854 / 1001
- / -
1000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
21 DAMC-101F5
Hschr6_MHC_MCF_ctg1
bMC101F5
EPN details
Submitted to EMBL
12-JAN-09
CT009517.12
finished
82609 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 114461 bps                  
23 DAMC-190N15
Hschr6_MHC_MCF_ctg1
bMC190N15
EPN details
Submitted to EMBL
12-JAN-09
CR759762.5
finished
40072 DNA-Arts.org BAC library MCF.1 3' / 5'
40072 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
24 DAMC-182C13
Hschr6_MHC_MCF_ctg1
bMC182C13
EPN details
Submitted to EMBL
12-JAN-09
CR759763.2
finished
110503 DNA-Arts.org BAC library MCF.1 3' / 5'
110503 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
25 DAMC-153M24
Hschr6_MHC_MCF_ctg1
bMC153M24
EPN details
Submitted to EMBL
12-JAN-09
CR759801.4
finished
21233 DNA-Arts.org BAC library MCF.1 3' / 5'
21233 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
26 DAMC-72C9
Hschr6_MHC_MCF_ctg1
bMC72C9
EPN details
Submitted to EMBL
12-JAN-09
CR759838.4
finished
104924 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 163747 bps                  
28 DAMC-170D7
Hschr6_MHC_MCF_ctg1
bMC170D7
EPN details
Submitted to EMBL
12-JAN-09
CR759832.3
finished
89070 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 22337 bps                  
30 DAMC-259M15
Hschr6_MHC_MCF_ctg1
bMC259M15
EPN details
Submitted to EMBL
12-JAN-09
CR936916.2
finished
25972 DNA-Arts.org BAC library MCF.1 3' / 5'
25972 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
31 DAMC-32J6
Hschr6_MHC_MCF_ctg1
bMC32J6
EPN details
Submitted to EMBL
12-JAN-09
CR936927.1
finished
44783 DNA-Arts.org BAC library MCF.1 3' / 5'
44783 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
32 DAMC-346K1
Hschr6_MHC_MCF_ctg1
bMC346K1
EPN details
Submitted to EMBL
12-JAN-09
CR847863.2
finished
22044 DNA-Arts.org BAC library MCF.1 3' / 5'
22044 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
33 DAMC-83F13
Hschr6_MHC_MCF_ctg1
bMC83F13
EPN details
Submitted to EMBL
12-JAN-09
CR759778.8
finished
88815 DNA-Arts.org BAC library MCF.1 3' / 5'
88815 / 876
- / -
875
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
34 XX-BMC83F13_BMC316D20
Hschr6_MHC_MCF_ctg1
Cl/Pr BMC83F13_BMC316D20/bMC83F13_bMC316D20 swap
EPN details
Submitted to EMBL
12-JAN-09
CU013522.1
finished
3329 - 3' / 5'
3329 / 50
- / -
49
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
35 DAMC-316D20
Hschr6_MHC_MCF_ctg1
bMC316D20
EPN details
Submitted to EMBL
12-JAN-09
CR788240.3
finished
75074 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 97959 bps                  
37 DAMC-325F20
Hschr6_MHC_MCF_ctg1
bMC325F20
EPN details
Submitted to EMBL
12-JAN-09
CR942271.10
finished
52666 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 10174 bps                  
39 DAMC-336H8
Hschr6_MHC_MCF_ctg1
bMC336H8
EPN details
Submitted to EMBL
12-JAN-09
CR936875.3
finished
48852 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 4797 bps                  
41 DAMC-192G6
Hschr6_MHC_MCF_ctg1
bMC192G6
EPN details
Submitted to EMBL
12-JAN-09
CR759772.4
finished
111150 DNA-Arts.org BAC library MCF.1 3' / 5'
111150 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
42 DAMC-11N4
Hschr6_MHC_MCF_ctg1
bMC11N4
EPN details
Submitted to EMBL
12-JAN-09
CR759805.5
finished
56809 DNA-Arts.org BAC library MCF.1 3' / 5'
56809 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
43 DAMC-257B19
Hschr6_MHC_MCF_ctg1
bMC257B19
EPN details
Submitted to EMBL
12-JAN-09
CR936880.3
finished
6810 DNA-Arts.org BAC library MCF.1 3' / 5'
6810 / 1940
- / -
1939
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
44 DAMC-338G21
Hschr6_MHC_MCF_ctg1
bMC338G21
EPN details
Submitted to EMBL
12-JAN-09
CR938714.3
finished
10602 DNA-Arts.org BAC library MCF.1 3' / 5'
10602 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
45 DAMC-88G10
Hschr6_MHC_MCF_ctg1
bMC88G10
EPN details
Submitted to EMBL
12-JAN-09
CR759815.3
finished
102782 DNA-Arts.org BAC library MCF.1 3' / 5'
102782 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
46 DAMC-118J7
Hschr6_MHC_MCF_ctg1
Cl/Pr bMC118J7/bMA291K3 swap
EPN details
Submitted to EMBL
12-JAN-09
CR933862.6
finished
27769 DNA-Arts.org BAC library MCF.1 3' / 5'
27769 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
47 DAMC-153L10
Hschr6_MHC_MCF_ctg1
bMC153L10
EPN details
Submitted to EMBL
12-JAN-09
CR759828.5
finished
102821 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 99452 bps                  
49 DAMA-190B12
Hschr6_MHC_MCF_ctg1
Cl/Pr bMA190B12/bMC190B12 swap
EPN details
Submitted to EMBL
12-JAN-09
CR753864.4
finished
82192 DNA-Arts BAC library MANN.1 3' / 5'
82192 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
50 DAMC-81L12
Hschr6_MHC_MCF_ctg1
bMC81L12
EPN details
Submitted to EMBL
12-JAN-09
CR942185.8
finished
55481 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 11423 bps                  
52 DAMC-157M7
Hschr6_MHC_MCF_ctg1
bMC157M7
EPN details
Submitted to EMBL
12-JAN-09
CR759761.9
finished
83849 DNA-Arts.org BAC library MCF.1 3' / 5'
83849 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
53 DAMC-117B11
Hschr6_MHC_MCF_ctg1
bMC117B11
EPN details
Submitted to EMBL
12-JAN-09
CR759787.4
finished
113650 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 34221 bps                  
55 DAMC-303C24
Hschr6_MHC_MCF_ctg1
bMC303C24
EPN details
Submitted to EMBL
12-JAN-09
CR759784.6
finished
63128 DNA-Arts.org BAC library MCF.1 3' / 5'
63128 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
56 DAMC-178C20
Hschr6_MHC_MCF_ctg1
bMC178C20
EPN details
Submitted to EMBL
12-JAN-09
CR759782.7
finished
79825 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 25852 bps                  
58 DAMC-258G8
Hschr6_MHC_MCF_ctg1
bMC258G8
EPN details
Submitted to EMBL
12-JAN-09
CR936924.2
finished
42131 DNA-Arts.org BAC library MCF.1 3' / 5'
42131 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
59 DAMC-407K20
Hschr6_MHC_MCF_ctg1
bMC407K20
EPN details
Submitted to EMBL
12-JAN-09
CR936882.4
finished
5584 DNA-Arts.org BAC library MCF.1 3' / 5'
5584 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
60 DAMC-284F20
Hschr6_MHC_MCF_ctg1
bMC284F20
EPN details
Submitted to EMBL
12-JAN-09
CR759792.3
finished
45162 DNA-Arts.org BAC library MCF.1 3' / 5'
45162 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
61 DAMC-327B5
Hschr6_MHC_MCF_ctg1
bMC327B5
EPN details
Submitted to EMBL
12-JAN-09
CR925796.6
finished
37304 DNA-Arts.org BAC library MCF.1 3' / 5'
37304 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
62 DAMC-108L3
Hschr6_MHC_MCF_ctg1
bMC108L3
EPN details
Submitted to EMBL
12-JAN-09
CR933878.7
finished
102907 DNA-Arts.org BAC library MCF.1 3' / 5'
102907 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
63 DAMC-278C20
Hschr6_MHC_MCF_ctg1
bMC278C20
EPN details
Submitted to EMBL
12-JAN-09
CR938720.8
finished
24329 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 56338 bps                  
65 DAMC-185H11
Hschr6_MHC_MCF_ctg1
bMC185H11
EPN details
Submitted to EMBL
12-JAN-09
CR759773.4
finished
117222 DNA-Arts.org BAC library MCF.1 3' / 5'
117222 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
66 DAMC-16P5
Hschr6_MHC_MCF_ctg1
bMC16P5
EPN details
Submitted to EMBL
12-JAN-09
CR759779.6
finished
38590 DNA-Arts.org BAC library MCF.1 3' / 5'
38590 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
67 DAMC-146E17
Hschr6_MHC_MCF_ctg1
bMC146E17
EPN details
Submitted to EMBL
12-JAN-09
CR788250.6
finished
88203 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 30555 bps                  
69 DAMC-134I7
Hschr6_MHC_MCF_ctg1
bMC134I7
EPN details
Submitted to EMBL
12-JAN-09
CR933859.5
finished
83682 DNA-Arts.org BAC library MCF.1 3' / 5'
83682 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
70 DAMC-176M21
Hschr6_MHC_MCF_ctg1
bMC176M21
EPN details
Submitted to EMBL
12-JAN-09
CR759848.2
finished
104881 DNA-Arts.org BAC library MCF.1 3' / 5'
104881 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
71 DAMC-27I8
Hschr6_MHC_MCF_ctg1
bMC27I8
EPN details
Submitted to EMBL
12-JAN-09
CT009502.2
finished
35167 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 47 bps                  
73 DAMC-219D2
Hschr6_MHC_MCF_ctg1
bMC219D2
EPN details
Submitted to EMBL
12-JAN-09
CR933844.2
finished
18319 DNA-Arts.org BAC library MCF.1 3' / 5'
18319 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
74 DAMC-226H3
Hschr6_MHC_MCF_ctg1
bMC226H3
EPN details
Submitted to EMBL
12-JAN-09
CR759798.3
finished
118408 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 17921 bps                  
76 DAMC-206D4
Hschr6_MHC_MCF_ctg1
bMC206D4
EPN details
Submitted to EMBL
12-JAN-09
CR759795.4
finished
119898 DNA-Arts.org BAC library MCF.1        
  GAP (type-2) length 172081 bps                  
78 DAMC-269O2
Hschr6_MHC_MCF_ctg1
bMC269O2
EPN details
Submitted to EMBL
12-JAN-09
CR936877.4
finished
50562 DNA-Arts.org BAC library MCF.1 3' / 5'
50562 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
79 DAMC-227D19
Hschr6_MHC_MCF_ctg1
bMC227D19
EPN details
Submitted to EMBL
12-JAN-09
CR759786.5
finished
123399 DNA-Arts.org BAC library MCF.1 3' / 5'
123399 / 2001
- / -
2000
0
Identified
2014-09-30
fetch_ncbi...
humpub
 
80 DAMC-283P18
Hschr6_MHC_MCF_ctg1
bMC283P18
EPN details
Submitted to EMBL
12-JAN-09
CR759793.3
finished
69184 DNA-Arts.org BAC library MCF.1        

Statistics

Clone Summary

Number of gaps
22
Gap types
type-2
22
Total clones
58
Clone HTGS Phases
finished
58
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
65,863
Total finished length of fin clones w/ overlap
3,770,112
Total finished length of fin clones w/o overlap
3,704,249
Total overlap length of fin+unfin clones
65,863
Total finished length of fin+unfin clones w/ overlap
3,770,112
Total finished length of fin+unfin clones w/o overlap
3,704,249

Search

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Other links

* quick link - http://q.sanger.ac.uk/tvj4u2bq