ChromoView - clone / Assembly sequencing status

H.melpomene: Sub region HeliM_mim (TPF updated: 2006-03-17)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 AEHM-46M10
ctg1
bHM46M10
EPN details
CT573313.6
finished
2 AEHM-41C10
ctg1
bHM41C10
EPN details
CR974474.4
finished
3 AEHM-7G12
ctg1
bHM7G12
EPN details
CT955980.4
finished
4 AEHM-12E13
ctg1
bHM12E13
EPN details

-

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 112576 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CT573313.6 1 112576 -
112577 211077 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CR974474.4 1 98501 -
211078 327214 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CT955980.4 2001 118137 +
327215 377214 4 N 50000 clone no

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 AEHM-46M10
ctg1
bHM46M10
EPN details
Analysed
09-MAR-06
CT573313.6
finished
112576 AE Heliconius melpomene 5' / 3'
1 / 98501
- / 19481
44
2.27
Identified
2006-03-22
find_overl...
badger
 
2 AEHM-41C10
ctg1
bHM41C10
EPN details
Analysed
23-AUG-05
CR974474.4
finished
118026 AE Heliconius melpomene 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-05-26
find_overl...
badger
 
3 AEHM-7G12
ctg1
bHM7G12
EPN details
Analysed
26-MAY-06
CT955980.4
finished
118137 AE Heliconius melpomene        
4 AEHM-12E13
ctg1
bHM12E13
EPN details
Cancelled
31-JAN-07

-
- AE Heliconius melpomene        

Statistics

Clone Summary

Number of gaps
0
Total clones
4
Clone HTGS Phases
finished
3
Number of clones w/o accession
1
Clones w/o htgs phase
1
Non-htgs clonenames
AEHM-12E13 (bHM12E13)

Overlap Summary

Total overlap length of fin clones
2,044
Total finished length of fin clones w/ overlap
348,739
Total finished length of fin clones w/o overlap
346,695
Total overlap length of fin+unfin clones
2,044
Total finished length of fin+unfin clones w/ overlap
348,739
Total finished length of fin+unfin clones w/o overlap
346,695

Dovetails

# rank accession status length date
1 2 CR974474.4 unfinished 19,481 Fri, 24 Oct 2014 23:00

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* quick link - http://q.sanger.ac.uk/koywdp89