ChromoView - clone / Assembly sequencing status

Mouse: Sub region chr5_steel (TPF updated: 2005-07-20)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 RP23-240B12
chr5_steel
bM240B12
AC122282.5
finished
2 RP24-291I7
chr5_steel
bN291I7
AC127255.4
finished
3 RP24-360K9
chr5_steel
bN360K9
AC132102.3
finished
4 RP23-345O14
chr5_steel
bM345O14
AC124228.16
finished
5 RP23-3M10
chr5_steel
bM3M10
AC087330.6
finished
6 RP24-297N9
chr5_steel
bN297N9
AC116500.13
finished
7 RP24-556H22
chr5_steel
bN556H22
AC117799.9
finished
8 RP24-188M1
chr5_steel
bN188M1
AC119205.8
finished
9 RP23-41I11
chr5_steel
bM41I11
AC145070.10
finished
10 RP24-132L16
chr5_steel
bN132L16
AC117735.8
finished
11 RP23-228F6
chr5_steel
bM228F6
AC159539.6
finished
12 RP24-180G11
chr5_steel
bN180G11
AC139562.8
finished
13 RP23-265I19
chr5_steel
bM265I19
AC162461.6
finished
14 RP23-400O10
chr5_steel
bM400O10
AC115795.11
finished
15 RP24-486F14
chr5_steel
bN486F14
AC119977.18
finished
16 RP24-151L11
chr5_steel
bN151L11
AC158756.4
finished
17 RP24-79A6
chr5_steel
bN79A6
AC115972.13
finished

AGP

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AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 227388 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC122282.5 1 227388 +
227389 249206 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC127255.4 1 21818 -
249207 388018 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC132102.3 1 138812 -
388019 537933 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC124228.16 1 149915 -
537934 700334 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC087330.6 43686 206086 +
700335 846120 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC116500.13 31904 177689 +
846121 922705 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC117799.9 102365 178949 +
922706 1060368 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC119205.8 1 137663 -
1060369 1195089 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC145070.10 1 134721 -
1195090 1353746 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC117735.8 1 158657 -
1353747 1548389 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC159539.6 43957 238599 +
1548390 1641509 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC139562.8 75039 168158 +
1641510 1818902 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC162461.6 56240 233632 +
1818903 2001459 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC115795.11 24547 207103 +
2001460 2100647 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC119977.18 1 99188 -
2100648 2163319 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC158756.4 85187 147858 +
2163320 2341440 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 17 AC115972.13 1 178121 -

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
0
Total clones
17
Clone HTGS Phases
finished
17
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
883,331
Total finished length of fin clones w/ overlap
3,224,782
Total finished length of fin clones w/o overlap
2,341,451
Total overlap length of fin+unfin clones
883,331
Total finished length of fin+unfin clones w/ overlap
3,224,782
Total finished length of fin+unfin clones w/o overlap
2,341,451

Dovetails

# rank accession status length date
1 5 AC087330.6 unfinished 7 Wed, 02 Sep 2015 03:54

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* quick link - http://q.sanger.ac.uk/5sqd9tul