ChromoView - clone / Assembly sequencing status

Pig: Sub region SSC17_MAX1 (TPF updated: 2007-02-05)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 CH242-213C10
ctg17005
bE213C10
CT009569.17
finished
2 CH242-275C12
ctg17005
bE275C12
CT009670.5
finished
3 CH242-7P5
ctg17005
bE7P5
CR956376.4
finished
4 CH242-4C12
ctg17005
bE4C12
CT009560.9
finished
5 CH242-123M10
ctg17005
bE123M10
CR974565.8
finished
6 CH242-217L7
ctg17005
bE217L7
CR974477.12
finished
7 CH242-132L9
ctg17005
bE132L9
CR956384.6
finished
8 CH242-277I8
ctg17005
bE277I8
CR956634.3
finished
9 CH242-228K14
ctg17005
bE228K14
CR956389.6
finished
10 CH242-152A8
ctg17005
bE152A8
CR956386.6
finished
11 CH242-209L2
ctg17005
bE209L2
CR974579.12
finished
12 CH242-323G23
ctg17005
bE323G23
CR956403.10
finished
13 CH242-511J12
ctg17005
bE511J12
CR974431.11
finished
14 CH242-50M2
ctg17005
bE50M2
CR956414.4
finished
15 CH242-300K12
ctg17005
bE300K12
CR956417.1
finished
16 CH242-248C21
ctg17005
bE248C21
CR956381.6
finished
17 CH242-206F5
ctg17005
bE206F5
CR974570.12
finished
18 CH242-148M18
ctg17005
bE148M18
CR956419.6
finished
19 CH242-214G8
ctg17005
bE214G8
CT009551.8
finished
20 CH242-34K8
ctg17005
bE34K8
CR956408.5
finished
21 CH242-219E11
ctg17005
bE219E11
CT009526.6
finished
22 CH242-212D21
ctg17005
bE212D21
CR974445.7
finished
23 CH242-247A17
ctg17005
bE247A17
CR956361.4
finished
24 CH242-201E3
ctg17005
bE201E3
CR956621.10
finished
25 CH242-112C22
ctg17005
bE112C22
CR974566.12
finished
26 CH242-167H11
ctg17005
bE167H11
CR956371.3
finished
27 CH242-271L5
ctg17005
bE271L5
CR956383.8
finished
28 CH242-184L20
ctg17005
bE184L20
CR956635.11
finished
29 CH242-216I3
ctg17005
bE216I3
CT009506.5
finished
30 CH242-276G9
ctg17005
bE276G9
CR956409.5
finished
31 CH242-51F17
ctg17005
bE51F17
CR956378.3
finished
32 CH242-279P20
ctg17005
bE279P20
CR956639.4
finished
33 CH242-155F23
ctg17005
bE155F23
CR956648.9
finished
34 CH242-268P22
ctg17005
bE268P22
CR956375.5
finished
35 CH242-42M23
ctg17005
bE42M23
CR956426.6
finished
36 CH242-282N1
ctg17005
bE282N1
CR956411.6
finished
37 CH242-284J14
ctg17005
bE284J14
CR956394.6
finished
38 CH242-29M17
ctg17005
bE29M17
CR974458.2
finished
39 CH242-258I7
ctg17005
bE258I7
CT009566.5
finished
40 CH242-153C17
ctg17005
bE153C17
CR956374.5
finished
41 CH242-69F10
ctg17005
bE69F10
CR956373.10
finished
42 PigE-201K20
ctg17005
bT201K20
CR956390.11
finished
43 CH242-163M14
ctg17005
bE163M14
CR956393.14
finished
44 CH242-441P16
ctg17005
bE441P16
CT573419.4
finished
45 CH242-155M9
ctg17005
bE155M9
CR956640.5
finished
46 CH242-255C19
ctg17005
bE255C19
CR974569.7
finished
47 CH242-204B8
ctg17005
bE204B8
CR956638.22
finished
48 CH242-143L3
ctg17005
bE143L3
CR956406.10
finished
49 CH242-266P8
ctg17005
bE266P8
CT009689.5
finished
50 CH242-235B3
ctg17005
bE235B3
CR974467.8
finished
51 CH242-98D1
ctg17005
bE98D1
CR956362.5
finished
52 CH242-148I13
ctg17005
bE148I13
CR956387.14
finished
53 PigE-122C21
ctg17005
bT122C21
CR956367.12
finished
54 CH242-142A14
ctg17005
bE142A14
CR956395.7
finished
55 CH242-259E5
ctg17005
bE259E5
CR956397.19
finished
56 CH242-256J18
ctg17005
bE256J18
CR956359.14
finished
57 CH242-172A22
ctg17005
bE172A22
CT009685.18
finished
58 PigE-75D22
ctg17005
bT75D22
CR956404.10
finished
59 CH242-447P16
ctg17005
bE447P16
CU207400.5
finished
60 PigE-206G21
ctg17005
bT206G21
CR956366.24
finished
61 CH242-240K6
ctg17005
bE240K6
CR956405.10
finished
62 CH242-178F16
ctg17005
bE178F16
CR956413.12
finished
63 CH242-247L10
ctg17005
bE247L10
CR956646.4
finished
64 CH242-250F12
ctg17005
bE250F12
CR974448.6
finished
65 PigE-182G21
ctg17005
bT182G21
CR956380.6
finished
66 CH242-281E17
ctg17005
bE281E17
CR956624.6
finished
67 CH242-200F24
ctg17005
bE200F24
CR974572.21
finished
68 CH242-519K3
ctg17005
bE519K3
CT573045.6
finished
69 CH242-60A21
ctg17005
bE60A21
CR956363.11
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 201723 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009569.17 1 201723 +
201724 227713 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009670.5 2001 27990 +
227714 378280 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956376.4 2001 152567 +
378281 542398 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009560.9 2001 166118 +
542399 560202 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974565.8 2001 19804 +
560203 762863 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974477.12 2001 204661 +
762864 832409 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956384.6 2001 71546 +
832410 1036687 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956634.3 2001 206278 +
1036688 1081548 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956389.6 2001 46861 +
1081549 1277122 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956386.6 2002 197575 +
1277123 1347717 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974579.12 2001 72595 +
1347718 1404414 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956403.10 1996 58692 +
1404415 1609848 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974431.11 2001 207434 +
1609849 1642945 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956414.4 2000 35096 +
1642946 1816955 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956417.1 1995 176004 +
1816956 1873736 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956381.6 2001 58781 +
1873737 1966160 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974570.12 2001 94424 +
1966161 2054919 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956419.6 2001 90759 +
2054920 2292156 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009551.8 2001 239237 +
2292157 2320567 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956408.5 2001 30411 +
2320568 2419471 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009526.6 2001 100904 +
2419472 2612987 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974445.7 2001 195516 +
2612988 2731510 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956361.4 2001 120523 +
2731511 2815104 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956621.10 1 83594 +
2815105 2977772 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974566.12 2001 164668 +
2977773 2979768 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956371.3 2001 3996 +
2979769 3140776 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956383.8 2000 163007 +
3140777 3350517 28 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956635.11 2001 211741 +
3350518 3454729 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009506.5 2001 106212 +
3454730 3583993 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956409.5 1 129264 +
3583994 3683290 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956378.3 1948 101244 +
3683291 3733933 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956639.4 1 50643 +
3733934 3900731 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956648.9 2001 168798 +
3900732 3978005 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956375.5 2001 79274 +
3978006 4111279 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956426.6 2001 135274 +
4111280 4330991 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956411.6 2001 221712 +
4330992 4341798 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956394.6 2001 12807 +
4341799 4517737 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974458.2 2001 177939 +
4517738 4591545 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009566.5 2001 75808 +
4591546 4707579 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956374.5 2001 118034 +
4707580 4895478 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956373.10 2000 189898 +
4895479 4900973 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956390.11 2001 7495 +
4900974 5094658 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956393.14 2000 195684 +
5094659 5138232 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT573419.4 2001 45574 +
5138233 5318275 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956640.5 2001 182043 +
5318276 5420382 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974569.7 2001 104107 +
5420383 5512675 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956638.22 2001 94293 +
5512676 5687748 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956406.10 2001 177073 +
5687749 5723828 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009689.5 2001 38080 +
5723829 5880803 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974467.8 2001 158975 +
5880804 6091306 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956362.5 2001 212503 +
6091307 6154651 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956387.14 2001 65345 +
6154652 6279228 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956367.12 1 124577 +
6279229 6367210 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956395.7 1993 89974 +
6367211 6542741 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956397.19 2001 177531 +
6542742 6678459 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956359.14 2001 137718 +
6678460 6792474 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT009685.18 1 114015 +
6792475 6851250 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956404.10 1999 60774 -
6851251 6885911 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CU207400.5 1 34661 +
6885912 7039268 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956366.24 1 153357 +
7039269 7172949 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956405.10 2001 135681 +
7172950 7244010 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956413.12 2001 73061 +
7244011 7413339 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956646.4 1 169329 -
7413340 7469223 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974448.6 2001 57884 +
7469224 7558802 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956380.6 2000 91578 +
7558803 7712641 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956624.6 2001 155839 +
7712642 7848072 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR974572.21 2001 137431 +
7848073 7951985 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CT573045.6 2001 105913 +
7951986 8158606 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 69 CR956363.11 2001 208621 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

Help

Clone Summary

Number of gaps
0
Total clones
69
Clone HTGS Phases
finished
69
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
208,081
Total finished length of fin clones w/ overlap
8,382,835
Total finished length of fin clones w/o overlap
8,174,754
Total overlap length of fin+unfin clones
208,081
Total finished length of fin+unfin clones w/ overlap
8,382,835
Total finished length of fin+unfin clones w/o overlap
8,174,754

Dovetails

# rank accession status length date
1 10 CR956386.6 unfinished 1 Mon, 27 Apr 2015 01:59
2 42 CR956390.11 unfinished 8 Mon, 27 Apr 2015 01:59
3 57 CT009685.18 unfinished 16,256 Mon, 27 Apr 2015 01:59

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Other links

* quick link - http://q.sanger.ac.uk/nkd26j3a