ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region H_23 (TPF updated: 2014-03-26)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH211-226I4
ctg2139
zC226I4
EPN details
AL935305.13
finished
  GAP (type-3) length unknown    
3 DKEY-98H23
ctg2144
zK98H23
EPN details
BX470267.5
finished
  GAP (type-3) length unknown    
5 DKEY-11D10
ctg2145
zK11D10
EPN details
CR354437.13
finished
  GAP (type-3) length unknown    
7 CH211-130M12
ctg2146
zC130M12
EPN details
BX005002.9
finished
  GAP (type-3) length unknown    
9 DKEY-12B15
ctg2148
zK12B15
EPN details
AL954838.14
finished
  GAP (type-3) length unknown    
11 DKEY-24C22
ctg2149
zK24C22
EPN details
BX927069.11
finished
12 CH211-229G3
ctg2149
zC229G3
EPN details
AL807377.10
finished
13 CH211-240A8
ctg2149
zC240A8
EPN details
BX119991.17
finished
  GAP (type-3) length unknown    
15 CH211-46H12
ctg2152
Cl/Pr zC46H12/zC42I6 swap
EPN details
BX469903.9
finished
  GAP (type-3) length unknown    
17 CH211-197C5
ctg2155
zC197C5
EPN details
CR376775.7
finished
  GAP (type-3) length unknown    
19 CH211-132N11
ctg2160
zC132N11
EPN details
BX005185.5
finished
20 CH211-209L14
ctg2160
zC209L14
EPN details
BX247945.6
finished
21 CH211-279A13
ctg2160
zC279A13
EPN details
BX322531.7
finished
22 CH211-212E24
ctg2160
zC212E24
EPN details
AL928728.9
finished
23 DKEYP-117H10
ctg2160
zKp117H10
EPN details
BX957247.4
finished
  GAP (type-3) length unknown    
25 DKEY-193P22
ctg2163
zK193P22
EPN details
CR774178.17
finished
  GAP (type-3) length unknown    
27 RP71-7A17
ctg2164
bZ7A17
EPN details
BX546488.10
finished
28 CH211-157B19
ctg2164
zC157B19
EPN details
AL929522.11
finished
29 CH211-15J16
ctg2164
zC15J16
EPN details
BX927368.13
finished
  GAP (type-3) length unknown    
31 CH211-189L6
ctg2166
zC189L6
EPN details
AL929578.4
finished
  GAP (type-3) length unknown    
33 DKEYP-97F4
ctg2168
zKp97F4
EPN details
CR318627.19
finished
  GAP (type-3) length unknown    
35 CH211-133L21
ctg2172
zC133L21
EPN details
BX323873.9
finished
  GAP (type-3) length unknown    
37 CH211-175P10
ctg2173
zC175P10
EPN details
CR628407.6
finished
38 DKEY-208D13
ctg2173
zK208D13
EPN details
BX649301.3
finished
39 DKEY-47C8
ctg2173
zK47C8
EPN details
CR450723.12
finished
  GAP (type-3) length unknown    
41 RP71-47G15
ctg2175
bZ47G15
EPN details
BX465189.9
finished
42 DKEY-28B17
ctg2175
zK28B17
EPN details
BX004787.8
finished
  GAP (type-3) length unknown    
44 DKEY-12I13
ctg2181
zK12I13
EPN details
BX005199.10
finished
45 CH211-158G13
ctg2181
zC158G13
EPN details
AL929508.6
finished
46 CH211-222H22
ctg2181
zC222H22
EPN details
AL954133.5
finished
47 DKEYP-77G7
ctg2181
zKp77G7
EPN details
BX571765.6
finished
48 DKEY-220G10
ctg2181
zK220G10
EPN details
BX548008.7
finished
49 CH211-262O24
ctg2181
zC262O24
EPN details
BX294392.3
finished
50 DKEY-65I13
ctg2181
zK65I13
EPN details
BX284665.21
finished
51 DKEY-283B10
ctg2181
zK283B10
EPN details
CR352239.11
finished
  GAP (type-3) length unknown    
53 RP71-44B8
ctg2182
bZ44B8
EPN details
BX322794.6
finished
  GAP (type-3) length unknown    
55 CH211-11F6
ctg2183
zC11F6
EPN details
BX548074.9
finished
  GAP (type-2) length unknown    
57 CH1073-121E5
ctg2184
zFD121E5
EPN details
FQ311953.5
finished
  GAP (type-3) length unknown    
59 DKEYP-27C2
ctg2185
zKp27C2
EPN details
BX321900.10
finished
60 DKEY-101O12
ctg2185
zK101O12
EPN details
BX323989.4
finished
  GAP (type-3) length unknown    
62 DKEY-97G16
ctg2187
zK97G16
EPN details
BX005387.7
finished
63 CH211-67N10
ctg2187
zC67N10
EPN details
AL954656.9
finished
  GAP (type-3) length unknown    
65 DKEY-3P10
ctg2191
zK3P10
EPN details
CR361559.12
finished
  GAP (type-3) length unknown    
67 CH211-201A8
ctg2198
zC201A8
EPN details
BX928749.12
finished
  GAP (type-3) length unknown    
69 DKEYP-11H3
ctg2200
zKp11H3
EPN details
CR318644.8
finished
70 CH211-12E7
ctg2200
zC12E7
EPN details
BX323831.7
finished
71 DKEY-17A2
ctg2200
zK17A2
EPN details
CR293516.8
finished
72 DKEY-266K15
ctg2200
zK266K15
EPN details
BX530074.13
finished
73 CH211-209B6
ctg2200
zC209B6
EPN details
BX322566.6
finished
  GAP (type-3) length unknown    
75 CH211-233F15
ctg2204
zC233F15
EPN details
AL935205.13
finished
  GAP (type-3) length unknown    
77 CH211-258K6
ctg2206
zC258K6
EPN details
CR385074.10
finished
  GAP (type-3) length unknown    
79 RP71-40J23
ctg2212
bZ40J23
EPN details
BX248228.3
finished
  GAP (type-3) length unknown    
81 DKEYP-123E12
ctg2218
zKp123E12
EPN details
CR352236.17
finished
  GAP (type-3) length unknown    
83 CH211-222C18
ctg2219
zC222C18
EPN details
BX322662.12
finished
84 CH211-51B3
ctg2219
zC51B3
EPN details
CR318669.18
finished
  GAP (type-3) length unknown    
86 CH211-286G12
ctg2228
zC286G12
EPN details
BX005483.3
finished
  GAP (type-3) length unknown    
88 CH211-113M13
ctg2302
zC113M13
EPN details
BX649505.6
finished
89 CH211-107H7
ctg2302
zC107H7
EPN details
BX640495.10
finished
  GAP (type-3) length unknown    
91 RP71-17G11
ctg2304
bZ17G11
EPN details
BX324148.9
finished
92 DKEYP-116B6
ctg2304
zKp116B6
EPN details
BX957303.8
finished
93 CH211-167F3
ctg2304
zC167F3
EPN details
BX957365.5
finished
94 CH211-253D2
ctg2304
zC253D2
EPN details
CR318635.8
finished
95 DKEY-45K13
ctg2304
zK45K13
EPN details
CR361545.10
finished
96 CH211-279M23
ctg2304
zC279M23
EPN details
BX005182.13
finished
97 DKEY-115O4
ctg2304
zK115O4
EPN details
CR381567.9
finished
98 DKEY-27C4
ctg2304
zK27C4
EPN details
BX571968.10
finished
  GAP (type-3) length unknown    
100 DKEY-124N6
ctg2637
zK124N6
EPN details
CU457776.6
finished
  GAP (type-3) length unknown    
102 DKEY-13O11
ctg2804
zK13O11
EPN details
BX004853.7
finished
  GAP (type-3) length unknown    
104 CH211-214J4
ctg2900
zC214J4
EPN details
BX119982.8
finished
  GAP (type-3) length unknown    
106 DKEY-115F16
ctg3077
zK115F16
EPN details
BX537357.7
finished
107 DKEYP-33D4
ctg3077
zKp33D4
EPN details
AL845367.6
finished
108 DKEY-105A6
ctg3077
zK105A6
EPN details
AL845422.6
finished
109 DKEYP-95E3
ctg3077
zKp95E3
EPN details
AL929139.7
finished
110 DKEY-34D20
ctg3077
zK34D20
EPN details
AL929038.13
finished
111 CH211-74M19
ctg3077
zC74M19
EPN details
BX928757.9
finished
112 DKEY-236H14
ctg3077
zK236H14
EPN details
CR855392.9
finished
  GAP (type-3) length unknown    
114 DKEYP-12B1
ctg3194
zKp12B1
EPN details
CT737136.8
finished
  GAP (type-3) length unknown    
116 DKEY-22L9
ctg3262
zK22L9
EPN details
CR388032.9
finished
  GAP (type-3) length unknown    
118 CH211-39F16
ctg6025
zC39F16
EPN details
CU041388.6
finished
  GAP (type-3) length unknown    
120 CH211-59K8
ctg6153
zC59K8
EPN details
AL929568.12
finished
  GAP (type-3) length unknown    
122 CH73-339H18
ctg7077
zH339H18
EPN details
CU013512.6
finished
123 CH73-348C2
ctg7077
zH348C2
EPN details
CT573386.5
finished
  GAP (type-3) length unknown    
125 DKEY-232A10
ctg22
zK232A10
EPN details
BX510651.9
finished
126 CH211-108P13
ctg22
zC108P13
EPN details
BX293534.6
finished
  GAP (type-3) length unknown    
128 CH73-250K19
ctg11
zH250K19
EPN details
FO834913.1
contiguous

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 190222 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 AL935305.13 1 190222 +
190223 240222 2 N 50000 contig no
240223 422525 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 BX470267.5 1 182303 +
422526 472525 4 N 50000 contig no
472526 678432 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 CR354437.13 1 205907 +
678433 728432 6 N 50000 contig no
728433 898706 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 7 BX005002.9 1 170274 +
898707 948706 8 N 50000 contig no
948707 1217030 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 9 AL954838.14 1 268324 +
1217031 1267030 10 N 50000 contig no
1267031 1429618 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 11 - 13 BX927069.11 1 162588 +
1429619 1597849 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 11 - 13 AL807377.10 2001 170231 +
1597850 1697197 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 11 - 13 BX119991.17 2001 101348 +
1697198 1747197 14 N 50000 contig no
1747198 1922944 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 15 BX469903.9 1 175747 +
1922945 1972944 16 N 50000 contig no
1972945 2169790 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 17 CR376775.7 1 196846 +
2169791 2219790 18 N 50000 contig no
2219791 2327138 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 20 BX005185.5 57174 164521 -
2327139 2526483 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 20 BX247945.6 1 199345 -
2526484 2531483 21 N 5000 No overlap in database    
2531484 2632647 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 23 BX322531.7 1 101164 +
2632648 2839160 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 23 AL928728.9 1 206513 +
2839161 2844160 24 N 5000 No overlap in database    
2844161 3010466 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 25 BX957247.4 1 166306 +
3010467 3060466 26 N 50000 contig no
3060467 3262984 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 27 - 27 CR774178.17 1 202518 +
3262985 3312984 28 N 50000 contig no
3312985 3415308 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 29 BX546488.10 1 102324 +
3415309 3420308 30 N 5000 No overlap in database    
3420309 3585427 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 31 AL929522.11 1 165119 +
3585428 3590427 32 N 5000 No overlap in database    
3590428 3766865 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 33 BX927368.13 1 176438 +
3766866 3816865 34 N 50000 contig no
3816866 3959435 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 35 AL929578.4 1 142570 +
3959436 4009435 36 N 50000 contig no
4009436 4185566 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 37 CR318627.19 1 176131 +
4185567 4235566 38 N 50000 contig no
4235567 4422274 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 39 BX323873.9 1 186708 +
4422275 4472274 40 N 50000 contig no
4472275 4571584 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 42 CR628407.6 1 99310 +
4571585 4719051 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 42 BX649301.3 1 147467 -
4719052 4724051 43 N 5000 No overlap in database    
4724052 4959038 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 44 CR450723.12 1 234987 +
4959039 5009038 45 N 50000 contig no
5009039 5141753 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 47 BX465189.9 1 132715 +
5141754 5337789 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 47 BX004787.8 2001 198036 +
5337790 5387789 48 N 50000 contig no
5387790 5506902 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 50 BX005199.10 1 119113 +
5506903 5684931 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 50 AL929508.6 2001 180029 +
5684932 5689931 51 N 5000 No overlap in database    
5689932 5896304 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 53 AL954133.5 1 206373 -
5896305 6042237 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 53 BX571765.6 2001 147933 +
6042238 6047237 54 N 5000 No overlap in database    
6047238 6233483 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 55 BX548008.7 1 186246 +
6233484 6238483 56 N 5000 No overlap in database    
6238484 6379735 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 57 BX294392.3 1 141252 +
6379736 6384735 58 N 5000 No overlap in database    
6384736 6613837 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 59 BX284665.21 1 229102 +
6613838 6618837 60 N 5000 No overlap in database    
6618838 6779554 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 61 CR352239.11 1 160717 +
6779555 6829554 62 N 50000 contig no
6829555 6974126 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 63 BX322794.6 1 144572 +
6974127 7024126 64 N 50000 contig no
7024127 7191140 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 65 BX548074.9 1 167014 +
7191141 7241140 66 N 50000 contig yes
7241141 7274311 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 67 FQ311953.5 1 33171 +
7274312 7324311 68 N 50000 contig no
7324312 7397663 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 70 BX321900.10 1 73352 +
7397664 7594038 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 70 BX323989.4 1991 198365 +
7594039 7644038 71 N 50000 contig no
7644039 7796655 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 72 - 72 BX005387.7 1 152617 +
7796656 7801655 73 N 5000 No overlap in database    
7801656 7982245 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 74 AL954656.9 1 180590 +
7982246 8032245 75 N 50000 contig no
8032246 8278286 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 76 - 76 CR361559.12 1 246041 +
8278287 8328286 77 N 50000 contig no
8328287 8543549 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 78 - 78 BX928749.12 1 215263 +
8543550 8593549 79 N 50000 contig no
8593550 8686533 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 84 CR318644.8 1 92984 +
8686534 8865171 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 84 BX323831.7 2001 180638 +
8865172 8907390 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 84 CR293516.8 2001 44219 +
8907391 9029460 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 84 BX530074.13 2001 124070 +
9029461 9230587 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 84 BX322566.6 2001 203127 +
9230588 9280587 85 N 50000 contig no
9280588 9431228 86 FClick to retrieve finished assembled sequence in green bar: rank(s) 86 - 86 AL935205.13 1 150641 +
9431229 9481228 87 N 50000 contig no
9481229 9644342 88 FClick to retrieve finished assembled sequence in green bar: rank(s) 88 - 88 CR385074.10 1 163114 +
9644343 9694342 89 N 50000 contig no
9694343 9835476 90 FClick to retrieve finished assembled sequence in green bar: rank(s) 90 - 90 BX248228.3 1 141134 +
9835477 9885476 91 N 50000 contig no
9885477 10063948 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 92 CR352236.17 1 178472 +
10063949 10113948 93 N 50000 contig no
10113949 10323357 94 FClick to retrieve finished assembled sequence in green bar: rank(s) 94 - 95 BX322662.12 1 209409 +
10323358 10429527 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 94 - 95 CR318669.18 2001 108170 +
10429528 10479527 96 N 50000 contig no
10479528 10662006 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 97 BX005483.3 1 182479 +
10662007 10712006 98 N 50000 contig no
10712007 10837170 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 100 BX649505.6 1 125164 +
10837171 10909012 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 100 BX640495.10 2001 73842 +
10909013 10959012 101 N 50000 contig no
10959013 11086368 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 107 BX324148.9 1 127356 +
11086369 11194900 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 107 BX957303.8 2001 110532 +
11194901 11209050 104 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 107 BX957365.5 2001 16150 +
11209051 11363362 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 107 CR318635.8 1 154312 +
11363363 11473369 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 107 CR361545.10 2001 112007 +
11473370 11627289 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 107 BX005182.13 1 153920 -
11627290 11632289 108 N 5000 No overlap in database    
11632290 11774706 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 110 CR381567.9 1 142417 +
11774707 11998082 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 110 BX571968.10 2001 225376 +
11998083 12048082 111 N 50000 contig no
12048083 12230065 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 112 CU457776.6 1 181983 +
12230066 12280065 113 N 50000 contig no
12280066 12462591 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 114 - 114 BX004853.7 1 182526 +
12462592 12512591 115 N 50000 contig no
12512592 12723293 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 116 - 116 BX119982.8 1 210702 +
12723294 12773293 117 N 50000 contig no
12773294 12828039 118 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 BX537357.7 2001 56746 -
12828040 12930685 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 AL845367.6 1 102646 +
12930686 13149821 120 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 AL845422.6 2001 221136 -
13149822 13218128 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 AL929139.7 2001 70307 -
13218129 13432108 122 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 AL929038.13 1 213980 -
13432109 13582263 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 BX928757.9 1 150155 -
13582264 13612732 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 124 CR855392.9 2001 32469 +
13612733 13662732 125 N 50000 contig no
13662733 13846646 126 FClick to retrieve finished assembled sequence in green bar: rank(s) 126 - 126 CT737136.8 1 183914 +
13846647 13896646 127 N 50000 contig no
13896647 14168400 128 FClick to retrieve finished assembled sequence in green bar: rank(s) 128 - 128 CR388032.9 1 271754 +
14168401 14218400 129 N 50000 contig no
14218401 14424186 130 FClick to retrieve finished assembled sequence in green bar: rank(s) 130 - 130 CU041388.6 1 205786 +
14424187 14474186 131 N 50000 contig no
14474187 14659443 132 FClick to retrieve finished assembled sequence in green bar: rank(s) 132 - 132 AL929568.12 1 185257 +
14659444 14709443 133 N 50000 contig no
14709444 14823341 134 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 135 CU013512.6 1 113898 +
14823342 14889203 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 135 CT573386.5 1 65862 -
14889204 14939203 136 N 50000 contig no
14939204 15006944 137 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 138 BX510651.9 7196 74936 -
15006945 15015346 138 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 138 BX293534.6 28945 37346 +
15015347 15065346 139 N 50000 contig no
15065347 15172149 140 A FO834913.1 1 106803 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH211-226I4
ctg2139
zC226I4
EPN details
Analysed
16-JAN-04
AL935305.13
finished
190222 CHORI-211        
  GAP (type-3) length unknown                  
3 DKEY-98H23
ctg2144
zK98H23
EPN details
Analysed
16-OCT-04
BX470267.5
finished
182303 DanioKey        
  GAP (type-3) length unknown                  
5 DKEY-11D10
ctg2145
zK11D10
EPN details
Analysed
12-NOV-05
CR354437.13
finished
205907 DanioKey        
  GAP (type-3) length unknown                  
7 CH211-130M12
ctg2146
zC130M12
EPN details
Analysed
12-MAR-04
BX005002.9
finished
170274 CHORI-211        
  GAP (type-3) length unknown                  
9 DKEY-12B15
ctg2148
zK12B15
EPN details
Analysed
24-JUL-03
AL954838.14
finished
268324 DanioKey        
  GAP (type-3) length unknown                  
11 DKEY-24C22
ctg2149
zK24C22
EPN details
Analysed
26-MAY-05
BX927069.11
finished
162588 DanioKey 3' / 5'
162588 / 2001
- / -
2000
0
Identified
2005-03-25
find_overl...
badger
 
12 CH211-229G3
ctg2149
zC229G3
EPN details
Analysed
29-JAN-03
AL807377.10
finished
170231 CHORI-211 3' / 5'
170231 / 2001
- / -
2000
0
Identified
2005-02-04
find_overl...
badger
 
13 CH211-240A8
ctg2149
zC240A8
EPN details
Analysed
29-APR-05
BX119991.17
finished
101348 CHORI-211        
  GAP (type-3) length unknown                  
15 CH211-46H12
ctg2152
Cl/Pr zC46H12/zC42I6 swap
EPN details
Analysed
11-AUG-04
BX469903.9
finished
175747 CHORI-211        
  GAP (type-3) length unknown                  
17 CH211-197C5
ctg2155
zC197C5
EPN details
Analysed
28-OCT-05
CR376775.7
finished
196846 CHORI-211        
  GAP (type-3) length unknown                  
19 CH211-132N11
ctg2160
zC132N11
EPN details
Analysed
02-AUG-03
BX005185.5
finished
164521 CHORI-211 5' / 3'
57174 / 199345
- / -
57177
0.02
Identified
2006-03-16
find_overl...
badger
 
20 CH211-209L14
ctg2160
zC209L14
EPN details
Analysed
16-JAN-04
BX247945.6
finished
199345 CHORI-211        
21 CH211-279A13
ctg2160
zC279A13
EPN details
Analysed
29-JAN-05
BX322531.7
finished
112322 CHORI-211 3' / 5'
101164 / 1
- / -
11188
0.27
Identified
2005-02-26
find_overl...
badger
 
22 CH211-212E24
ctg2160
zC212E24
EPN details
Analysed
19-AUG-03
AL928728.9
finished
206513 CHORI-211        
23 DKEYP-117H10
ctg2160
zKp117H10
EPN details
Analysed
13-APR-05
BX957247.4
finished
166306 DanioKeypilot        
  GAP (type-3) length unknown                  
25 DKEY-193P22
ctg2163
zK193P22
EPN details
Analysed
25-JAN-07
CR774178.17
finished
202518 DanioKey        
  GAP (type-3) length unknown                  
27 RP71-7A17
ctg2164
bZ7A17
EPN details
Analysed
10-JUN-05
BX546488.10
finished
102324 RPCI-71        
28 CH211-157B19
ctg2164
zC157B19
EPN details
Analysed
15-NOV-03
AL929522.11
finished
165119 CHORI-211        
29 CH211-15J16
ctg2164
zC15J16
EPN details
Analysed
13-OCT-05
BX927368.13
finished
176438 CHORI-211        
  GAP (type-3) length unknown                  
31 CH211-189L6
ctg2166
zC189L6
EPN details
Analysed
10-MAY-03
AL929578.4
finished
142570 CHORI-211        
  GAP (type-3) length unknown                  
33 DKEYP-97F4
ctg2168
zKp97F4
EPN details
Analysed
04-APR-06
CR318627.19
finished
176131 DanioKeypilot        
  GAP (type-3) length unknown                  
35 CH211-133L21
ctg2172
zC133L21
EPN details
Analysed
27-MAR-04
BX323873.9
finished
186708 CHORI-211        
  GAP (type-3) length unknown                  
37 CH211-175P10
ctg2173
zC175P10
EPN details
Analysed
25-AUG-06
CR628407.6
finished
99310 CHORI-211 3' / 3'
99310 / 147467
- / -
2000
0
Identified
2006-09-03
find_overl...
badger
 
38 DKEY-208D13
ctg2173
zK208D13
EPN details
Analysed
18-NOV-04
BX649301.3
finished
149467 DanioKey        
39 DKEY-47C8
ctg2173
zK47C8
EPN details
Analysed
01-MAR-06
CR450723.12
finished
234987 DanioKey        
  GAP (type-3) length unknown                  
41 RP71-47G15
ctg2175
bZ47G15
EPN details
Analysed
28-AUG-04
BX465189.9
finished
132715 RPCI-71 3' / 5'
132715 / 2001
- / -
2000
0
Identified
2004-07-17
find_overl...
badger
 
42 DKEY-28B17
ctg2175
zK28B17
EPN details
Analysed
16-JAN-04
BX004787.8
finished
198036 DanioKey        
  GAP (type-3) length unknown                  
44 DKEY-12I13
ctg2181
zK12I13
EPN details
Analysed
23-AUG-03
BX005199.10
finished
119113 DanioKey 3' / 5'
119113 / 2001
- / -
2000
0
Identified
2003-06-30
find_overl...
badger
 
45 CH211-158G13
ctg2181
zC158G13
EPN details
Analysed
19-MAR-04
AL929508.6
finished
180029 CHORI-211        
46 CH211-222H22
ctg2181
zC222H22
EPN details
Analysed
26-APR-03
AL954133.5
finished
206373 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2004-07-02
find_overl...
badger
 
47 DKEYP-77G7
ctg2181
zKp77G7
EPN details
Analysed
21-JUL-04
BX571765.6
finished
147933 DanioKeypilot        
48 DKEY-220G10
ctg2181
zK220G10
EPN details
Analysed
05-OCT-04
BX548008.7
finished
186246 DanioKey        
49 CH211-262O24
ctg2181
zC262O24
EPN details
Analysed
14-JAN-04
BX294392.3
finished
141252 CHORI-211        
50 DKEY-65I13
ctg2181
zK65I13
EPN details
Analysed
07-SEP-06
BX284665.21
finished
229102 DanioKey        
51 DKEY-283B10
ctg2181
zK283B10
EPN details
Analysed
01-SEP-06
CR352239.11
finished
160717 DanioKey        
  GAP (type-3) length unknown                  
53 RP71-44B8
ctg2182
bZ44B8
EPN details
Analysed
18-AUG-04
BX322794.6
finished
144572 RPCI-71        
  GAP (type-3) length unknown                  
55 CH211-11F6
ctg2183
zC11F6
EPN details
Analysed
29-SEP-04
BX548074.9
finished
167014 CHORI-211        
  GAP (type-2) length unknown                  
57 CH1073-121E5
ctg2184
zFD121E5
EPN details
Analysed
07-DEC-10
FQ311953.5
finished
33171 CHORI1073        
  GAP (type-3) length unknown                  
59 DKEYP-27C2
ctg2185
zKp27C2
EPN details
Analysed
02-MAR-05
BX321900.10
finished
73352 DanioKeypilot 3' / 5'
73352 / 1991
- / -
2000
0
Identified
2010-07-06
find_overl...
humpub
 
60 DKEY-101O12
ctg2185
zK101O12
EPN details
Analysed
06-JUN-04
BX323989.4
finished
198365 DanioKey        
  GAP (type-3) length unknown                  
62 DKEY-97G16
ctg2187
zK97G16
EPN details
Analysed
18-MAR-04
BX005387.7
finished
152617 DanioKey        
63 CH211-67N10
ctg2187
zC67N10
EPN details
Analysed
22-JAN-04
AL954656.9
finished
180590 CHORI-211        
  GAP (type-3) length unknown                  
65 DKEY-3P10
ctg2191
zK3P10
EPN details
Analysed
13-AUG-05
CR361559.12
finished
246041 DanioKey        
  GAP (type-3) length unknown                  
67 CH211-201A8
ctg2198
zC201A8
EPN details
Analysed
30-MAR-06
BX928749.12
finished
215263 CHORI-211        
  GAP (type-3) length unknown                  
69 DKEYP-11H3
ctg2200
zKp11H3
EPN details
Analysed
10-AUG-05
CR318644.8
finished
92984 DanioKeypilot 3' / 5'
92984 / 2001
- / -
2000
0
Identified
2005-06-25
find_overl...
badger
 
70 CH211-12E7
ctg2200
zC12E7
EPN details
Analysed
09-JUN-04
BX323831.7
finished
180638 CHORI-211 3' / 5'
180638 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
71 DKEY-17A2
ctg2200
zK17A2
EPN details
Analysed
07-MAR-06
CR293516.8
finished
44219 DanioKey 3' / 5'
44219 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
72 DKEY-266K15
ctg2200
zK266K15
EPN details
Analysed
19-JUL-05
BX530074.13
finished
124070 DanioKey 3' / 5'
124070 / 2001
- / -
2000
0
Identified
2004-08-06
find_overl...
badger
 
73 CH211-209B6
ctg2200
zC209B6
EPN details
Analysed
18-MAR-04
BX322566.6
finished
203127 CHORI-211        
  GAP (type-3) length unknown                  
75 CH211-233F15
ctg2204
zC233F15
EPN details
Analysed
09-JAN-04
AL935205.13
finished
150641 CHORI-211        
  GAP (type-3) length unknown                  
77 CH211-258K6
ctg2206
zC258K6
EPN details
Analysed
08-APR-05
CR385074.10
finished
163114 CHORI-211        
  GAP (type-3) length unknown                  
79 RP71-40J23
ctg2212
bZ40J23
EPN details
Analysed
14-JAN-04
BX248228.3
finished
141134 RPCI-71        
  GAP (type-3) length unknown                  
81 DKEYP-123E12
ctg2218
zKp123E12
EPN details
Analysed
16-MAY-06
CR352236.17
finished
178472 DanioKeypilot        
  GAP (type-3) length unknown                  
83 CH211-222C18
ctg2219
zC222C18
EPN details
Analysed
08-JUN-05
BX322662.12
finished
209409 CHORI-211 3' / 5'
209409 / 2001
- / -
2000
0
Identified
2006-01-26
find_overl...
badger
 
84 CH211-51B3
ctg2219
zC51B3
EPN details
Analysed
25-JAN-06
CR318669.18
finished
108170 CHORI-211        
  GAP (type-3) length unknown                  
86 CH211-286G12
ctg2228
zC286G12
EPN details
Analysed
13-MAR-04
BX005483.3
finished
182479 CHORI-211        
  GAP (type-3) length unknown                  
88 CH211-113M13
ctg2302
zC113M13
EPN details
Analysed
17-AUG-04
BX649505.6
finished
125164 CHORI-211 3' / 5'
125164 / 2001
- / -
2000
0
Identified
2004-08-20
find_overl...
badger
 
89 CH211-107H7
ctg2302
zC107H7
EPN details
Analysed
11-FEB-04
BX640495.10
finished
73842 CHORI-211        
  GAP (type-3) length unknown                  
91 RP71-17G11
ctg2304
bZ17G11
EPN details
Analysed
15-DEC-04
BX324148.9
finished
127356 RPCI-71 3' / 5'
127356 / 2001
- / -
2000
0
Identified
2005-05-07
find_overl...
badger
 
92 DKEYP-116B6
ctg2304
zKp116B6
EPN details
Analysed
18-JUL-05
BX957303.8
finished
110532 DanioKeypilot 3' / 5'
110532 / 2001
- / -
2000
0
Identified
2005-06-25
find_overl...
badger
 
93 CH211-167F3
ctg2304
zC167F3
EPN details
Analysed
09-AUG-05
BX957365.5
finished
18148 CHORI-211 3' / 5'
16150 / 1
- / -
2003
0.25
Identified
2005-06-25
find_overl...
badger
 
94 CH211-253D2
ctg2304
zC253D2
EPN details
Analysed
16-AUG-05
CR318635.8
finished
154312 CHORI-211 3' / 5'
154312 / 2001
- / -
2000
0
Identified
2005-07-30
find_overl...
badger
 
95 DKEY-45K13
ctg2304
zK45K13
EPN details
Analysed
13-OCT-05
CR361545.10
finished
112007 DanioKey 3' / 3'
112007 / 153920
- / -
2000
0
Identified
2005-07-30
find_overl...
badger
 
96 CH211-279M23
ctg2304
zC279M23
EPN details
Analysed
22-JAN-04
BX005182.13
finished
155920 CHORI-211        
97 DKEY-115O4
ctg2304
zK115O4
EPN details
Analysed
28-MAR-06
CR381567.9
finished
142417 DanioKey 3' / 5'
142417 / 2001
- / -
2000
0
Identified
2006-03-30
find_overl...
badger
 
98 DKEY-27C4
ctg2304
zK27C4
EPN details
Analysed
08-MAY-04
BX571968.10
finished
225376 DanioKey        
  GAP (type-3) length unknown                  
100 DKEY-124N6
ctg2637
zK124N6
EPN details
Analysed
25-AUG-07
CU457776.6
finished
181983 DanioKey        
  GAP (type-3) length unknown                  
102 DKEY-13O11
ctg2804
zK13O11
EPN details
Analysed
20-JAN-04
BX004853.7
finished
182526 DanioKey        
  GAP (type-3) length unknown                  
104 CH211-214J4
ctg2900
zC214J4
EPN details
Analysed
16-JAN-04
BX119982.8
finished
210702 CHORI-211        
  GAP (type-3) length unknown                  
106 DKEY-115F16
ctg3077
zK115F16
EPN details
Analysed
09-SEP-04
BX537357.7
finished
56746 DanioKey 5' / 5'
2001 / 1
- / -
2000
0
Identified
2004-08-27
find_overl...
badger
 
107 DKEYP-33D4
ctg3077
zKp33D4
EPN details
Analysed
13-FEB-03
AL845367.6
finished
104646 DanioKeypilot 3' / 3'
102646 / 221136
- / -
2000
0
Identified
2003-07-03
find_overl...
badger
 
108 DKEY-105A6
ctg3077
zK105A6
EPN details
Submitted to EMBL
12-JAN-09
AL845422.6
finished
221136 DanioKey 5' / 3'
2001 / 70307
- / -
2000
0
Identified
2003-07-03
find_overl...
badger
 
109 DKEYP-95E3
ctg3077
zKp95E3
EPN details
Analysed
18-MAR-03
AL929139.7
finished
70307 DanioKeypilot 5' / 3'
2001 / 213980
- / -
2000
0
Identified
2003-07-03
find_overl...
badger
 
110 DKEY-34D20
ctg3077
zK34D20
EPN details
Analysed
16-JUL-03
AL929038.13
finished
213980 DanioKey 5' / 3'
1 / 150155
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
111 CH211-74M19
ctg3077
zC74M19
EPN details
Analysed
21-OCT-04
BX928757.9
finished
152155 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-04-27
find_overl...
badger
 
112 DKEY-236H14
ctg3077
zK236H14
EPN details
Analysed
25-APR-06
CR855392.9
finished
32469 DanioKey        
  GAP (type-3) length unknown                  
114 DKEYP-12B1
ctg3194
zKp12B1
EPN details
Analysed
05-OCT-06
CT737136.8
finished
183914 DanioKeypilot        
  GAP (type-3) length unknown                  
116 DKEY-22L9
ctg3262
zK22L9
EPN details
Analysed
29-JUL-05
CR388032.9
finished
271754 DanioKey        
  GAP (type-3) length unknown                  
118 CH211-39F16
ctg6025
zC39F16
EPN details
Analysed
27-APR-07
CU041388.6
finished
205786 CHORI-211        
  GAP (type-3) length unknown                  
120 CH211-59K8
ctg6153
zC59K8
EPN details
Analysed
04-SEP-03
AL929568.12
finished
185257 CHORI-211        
  GAP (type-3) length unknown                  
122 CH73-339H18
ctg7077
zH339H18
EPN details
Analysed
20-MAR-07
CU013512.6
finished
115898 CHORI-73 3' / 3'
113898 / 65862
- / -
2000
0
Identified
2007-04-19
find_overl...
badger
 
123 CH73-348C2
ctg7077
zH348C2
EPN details
Analysed
19-APR-07
CT573386.5
finished
65862 CHORI-73        
  GAP (type-3) length unknown                  
125 DKEY-232A10
ctg22
zK232A10
EPN details
Analysed
06-NOV-04
BX510651.9
finished
74936 DanioKey 5' / 5'
7196 / 28945
7195 / -
17233
171.79
Identified
2014-02-14
fetch_ncbi...
humpub
 
126 CH211-108P13
ctg22
zC108P13
EPN details
Analysed
24-MAR-04
BX293534.6
finished
37346 CHORI-211        
  GAP (type-3) length unknown                  
128 CH73-250K19
ctg11
zH250K19
EPN details
SS Indexed Workflow Completed
21-MAR-14
FO834913.1
contiguous
106803 CHORI-73        

Statistics

Clone Summary

Number of gaps
43
Gap types
type-2
1
type-3
42
Total clones
85
Clone HTGS Phases
contiguous
1
finished
84
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
137,601
Total finished length of fin clones w/ overlap
13,011,804
Total finished length of fin clones w/o overlap
12,874,203
Total overlap length of fin+unfin clones
137,601
Total finished length of fin+unfin clones w/ overlap
13,118,607
Total finished length of fin+unfin clones w/o overlap
12,981,006

Dovetails

# rank accession status length date
1 125 BX510651.9 unfinished 7,195 Thu, 23 Oct 2014 03:51

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Other links

* quick link - http://q.sanger.ac.uk/ko9ie18s