ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region H_22 (TPF updated: 2013-10-18)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH211-142P8
ctg120
zC142P8
EPN details
BX927094.13
finished
2 CH211-165I22
ctg120
zC165I22
EPN details
AL929509.15
finished
3 DKEY-72G22
ctg120
zK72G22
EPN details
CT027575.9
finished
  GAP (type-3) length unknown    
5 CH211-195I21
ctg2087
zC195I21
EPN details
CR847569.14
finished
6 DKEY-33L16
ctg2087
zK33L16
EPN details
CR628370.28
finished
7 DKEY-156I20
ctg2087
zK156I20
EPN details
CU463157.4
finished
  GAP (type-3) length unknown    
9 DKEY-77M18
ctg2099
zK77M18
EPN details
BX664624.5
finished
10 CH211-184B9
ctg2099
zC184B9
EPN details
BX072569.6
finished
11 DKEY-3E17
ctg2099
zK3E17
EPN details
CR391993.14
finished
12 DKEYP-93A3
ctg2099
zKp93A3
EPN details
BX511219.7
finished
  GAP (type-3) length unknown    
14 CH211-278E17
ctg2102
zC278E17
EPN details
BX248330.6
finished
15 DKEY-179J5
ctg2102
zK179J5
EPN details
CR932977.11
finished
16 CH211-154A22
ctg2102
zC154A22
EPN details
BX548076.6
finished
17 CH73-240C14
ctg2102
zH240C14
EPN details
CU463850.5
finished
18 DKEY-240E12
ctg2102
zK240E12
EPN details
BX571958.11
finished
19 CH73-365D21
ctg2102
zH365D21
EPN details
CT025943.17
finished
  GAP (type-3) length unknown    
21 DKEY-180K24
ctg2111
zK180K24
EPN details
BX927070.10
finished
22 CH73-31I8
ctg2111
zH31I8
EPN details
CT009669.5
finished
  GAP (type-3) length unknown    
24 DKEY-11H11
ctg2162
zK11H11
EPN details
AL954725.9
finished
25 CH211-39F23
ctg2162
zC39F23
EPN details
BX465185.8
finished
  GAP (type-3) length unknown    
27 DKEY-53B10
ctg5012
zK53B10
EPN details
BX936311.13
finished
28 CH73-13N19
ctg5012
zH13N19
EPN details
FP102166.4
finished
  GAP (type-3) length unknown    
30 CH211-151I8
ctg6011
zC151I8
EPN details
CR847808.6
finished
  GAP (type-3) length unknown    
32 CH211-81L19
ctg6082
zC81L19
EPN details
CU074309.8
finished
  GAP (type-3) length unknown    
34 DKEY-257J24
ctg6097
zK257J24
EPN details
BX927259.8
finished
35 CH211-271K12
ctg6097
zC271K12
EPN details
BX897656.9
finished
36 CH211-185L6
ctg6097
zC185L6
EPN details
CR936319.5
finished
  GAP (type-3) length unknown    
38 DKEY-101P20
ctg6142
zK101P20
EPN details
BX901976.22
finished
  GAP (type-3) length unknown    
40 CH211-140C22
ctg6181
zC140C22
EPN details
BX927248.6
finished
41 CH211-147M4
ctg6181
zC147M4
EPN details
BX321879.14
finished
42 CH211-195A16
ctg6181
zC195A16
EPN details
CR385085.10
finished
43 CH211-206G18
ctg6181
zC206G18
EPN details
CR855315.5
finished
44 DKEY-222P23
ctg6181
zK222P23
EPN details
CR926460.7
finished
  GAP (type-3) length unknown    
46 DKEY-39A4
ctg6201
zK39A4
EPN details
BX957240.10
finished
  GAP (type-3) length unknown    
48 CH211-182N24
ctg6350
zC182N24
EPN details
BX005078.32
finished
49 DKEY-18D13
ctg6350
zK18D13
EPN details
BX640455.19
finished
50 DKEY-232H18
ctg6350
zK232H18
EPN details
BX571946.9
finished
  GAP (type-3) length unknown    
52 CH211-14C11
ctg6381
Cl/Pr zC14C11/zC129H24 swap
EPN details
BX640467.12
finished
  GAP (type-3) length unknown    
54 CH211-288B23
ctg6394
zC288B23
EPN details
BX927140.10
finished
55 CH211-15A18
ctg6394
zC15A18
EPN details
BX005009.11
finished
  GAP (type-3) length unknown    
57 CH211-128N21
ctg6422
zC128N21
EPN details
AL772158.6
finished
58 CH211-159C12
ctg6422
zC159C12
EPN details
BX005362.6
finished
59 CH211-111N6
ctg6422
zC111N6
EPN details
CR735122.6
finished
60 CH211-91I13
ctg6422
zC91I13
EPN details
BX649552.3
finished
61 DKEY-262O11
ctg6422
zK262O11
EPN details
BX908764.11
finished
  GAP (type-3) length unknown    
63 DKEY-30G10
ctg6470
zK30G10
EPN details
BX664629.10
finished
  GAP (type-3) length unknown    
65 DKEY-51M5
ctg6471
zK51M5
EPN details
CR394541.16
finished
66 CH211-195B2
ctg6471
zC195B2
EPN details
BX255931.5
finished
67 DKEY-268M13
ctg6471
zK268M13
EPN details
BX293565.25
finished
  GAP (type-3) length unknown    
69 DKEY-101H20
ctg6473
zK101H20
EPN details
BX957261.10
finished
70 CH211-198E14
ctg6473
zC198E14
EPN details
AL935286.14
finished
  GAP (type-3) length unknown    
72 CH211-217A1
ctg6492
zC217A1
EPN details
AL954702.9
finished
73 DKEY-176M8
ctg6492
zK176M8
EPN details
CR936284.10
finished
74 DKEY-164M7
ctg6492
zK164M7
EPN details
BX005388.20
finished
75 DKEY-193B19
ctg6492
zK193B19
EPN details
BX936370.5
finished
  GAP (type-3) length unknown    
77 DKEY-30A6
ctg6493
zK30A6
EPN details
BX000465.12
finished
  GAP (type-3) length unknown    
79 CH211-51F18
ctg6495
zC51F18
EPN details
BX511183.6
finished
  GAP (type-3) length unknown    
81 DKEY-29D12
ctg6547
zK29D12
EPN details
BX004795.6
finished
  GAP (type-3) length unknown    
83 DKEY-13C13
ctg6620
zK13C13
EPN details
BX510921.8
finished
84 DKEY-75L1
ctg6620
zK75L1
EPN details
BX248416.3
finished
  GAP (type-3) length unknown    
86 CH211-262J3
ctg6678
zC262J3
EPN details
BX927096.16
finished
87 CH211-171D11
ctg6678
zC171D11
EPN details
AL935146.13
finished
  GAP (type-3) length unknown    
89 DKEYP-26H11
ctg6712
zKp26H11
EPN details
CR384108.7
finished
  GAP (type-3) length unknown    
91 DKEY-21O6
ctg6793
zK21O6
EPN details
BX649488.9
finished
  GAP (type-3) length unknown    
93 CH211-195N20
ctg7096
zC195N20
EPN details
BX901926.19
finished
  GAP (type-3) length unknown    
95 DKEY-9N18
ctg7096_1
zK9N18
EPN details
CU462880.8
finished
  GAP (type-3) length unknown    
97 DKEY-211E20
ctg62
zK211E20
EPN details
CU137686.6
finished
  GAP (type-3) length unknown    
99 CH211-42G15
ctg67
zC42G15
EPN details
AL929580.10
finished
  GAP (type-3) length unknown    
101 CH211-270E10
ctg69
zC270E10
EPN details
BX649373.4
finished
  GAP (type-3) length unknown    
103 CH73-111B21
ctg3
zH111B21
EPN details
CR927479.22
finished
  GAP (type-3) length unknown    
105 CH211-134K14
ctg92
zC134K14
EPN details
CU179698.11
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 77143 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX927094.13 1 77143 +
77144 214771 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AL929509.15 1 137628 -
214772 251812 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CT027575.9 2001 39041 +
251813 301812 4 N 50000 contig no
301813 421987 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 CR847569.14 1 120175 +
421988 610954 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 CR628370.28 2001 190967 +
610955 716254 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 CU463157.4 2001 107300 +
716255 766254 8 N 50000 contig no
766255 819072 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 12 BX664624.5 2001 54818 -
819073 963801 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 12 BX072569.6 1 144729 +
963802 1084452 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 12 CR391993.14 1 120651 -
1084453 1284333 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 12 BX511219.7 1 199881 -
1284334 1334333 13 N 50000 contig no
1334334 1524213 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 14 - 14 BX248330.6 1 189880 +
1524214 1529213 15 N 5000 No overlap in database    
1529214 1628080 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 18 CR932977.11 1 98867 -
1628081 1801241 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 18 BX548076.6 2001 175161 +
1801242 1829715 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 18 CU463850.5 2001 30474 +
1829716 1834715 19 N 5000 No overlap in database    
1834716 2056107 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 20 BX571958.11 1 221392 +
2056108 2061107 21 N 5000 No overlap in database    
2061108 2172885 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 22 CT025943.17 1 111778 +
2172886 2222885 23 N 50000 contig no
2222886 2294855 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 24 - 24 BX927070.10 1 71970 +
2294856 2299855 25 N 5000 No overlap in database    
2299856 2390879 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 26 - 26 CT009669.5 1 91024 +
2390880 2440879 27 N 50000 contig no
2440880 2658850 28 FClick to retrieve finished assembled sequence in green bar: rank(s) 28 - 29 AL954725.9 1 217971 +
2658851 2807540 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 28 - 29 BX465185.8 1 148690 -
2807541 2857540 30 N 50000 contig no
2857541 3050290 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 31 BX936311.13 1 192750 +
3050291 3055290 32 N 5000 No overlap in database    
3055291 3125381 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 33 FP102166.4 1 70091 +
3125382 3175381 34 N 50000 contig no
3175382 3323375 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 35 CR847808.6 1 147994 +
3323376 3373375 36 N 50000 contig no
3373376 3528881 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 37 CU074309.8 1 155506 +
3528882 3578881 38 N 50000 contig no
3578882 3597533 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 41 BX927259.8 1 18652 +
3597534 3737419 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 41 BX897656.9 1 139886 -
3737420 3739838 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 41 CR936319.5 2001 4419 +
3739839 3789838 42 N 50000 contig no
3789839 3991766 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 43 BX901976.22 1 201928 +
3991767 4041766 44 N 50000 contig no
4041767 4123139 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 49 BX927248.6 1 81373 +
4123140 4284062 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 49 BX321879.14 2001 162923 +
4284063 4459865 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 49 CR385085.10 35258 211060 +
4459866 4463829 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 49 CR855315.5 2001 5964 +
4463830 4488515 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 49 CR926460.7 2001 26686 +
4488516 4538515 50 N 50000 contig no
4538516 4646900 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 51 BX957240.10 1 108385 +
4646901 4696900 52 N 50000 contig no
4696901 4832188 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 BX005078.32 1 135288 -
4832189 4905913 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 BX640455.19 1 73725 -
4905914 5083731 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 BX571946.9 1979 179796 +
5083732 5133731 56 N 50000 contig no
5133732 5245235 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 57 BX640467.12 1 111504 +
5245236 5295235 58 N 50000 contig no
5295236 5418483 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 60 BX927140.10 2001 125248 -
5418484 5605173 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 60 BX005009.11 1 186690 -
5605174 5655173 61 N 50000 contig no
5655174 5833219 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 62 - 66 AL772158.6 1 178046 -
5833220 5948594 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 62 - 66 BX005362.6 1 115375 -
5948595 5959157 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 62 - 66 CR735122.6 1 10563 -
5959158 6120701 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 62 - 66 BX649552.3 2001 163544 +
6120702 6248931 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 62 - 66 BX908764.11 2001 130230 +
6248932 6298931 67 N 50000 contig no
6298932 6555368 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 68 - 68 BX664629.10 1 256437 +
6555369 6605368 69 N 50000 contig no
6605369 6670249 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 70 - 72 CR394541.16 1 64881 +
6670250 6857576 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 70 - 72 BX255931.5 2001 189327 +
6857577 7016506 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 70 - 72 BX293565.25 2001 160930 +
7016507 7066506 73 N 50000 contig no
7066507 7110645 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 75 BX957261.10 1 44139 +
7110646 7319942 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 75 AL935286.14 2001 211297 +
7319943 7369942 76 N 50000 contig no
7369943 7570963 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 79 AL954702.9 1 201021 -
7570964 7575313 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 79 CR936284.10 2001 6350 +
7575314 7794053 79 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 79 BX005388.20 1 218740 -
7794054 7799053 80 N 5000 No overlap in database    
7799054 7896915 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 81 BX936370.5 1 97862 +
7896916 7946915 82 N 50000 contig no
7946916 8161914 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 83 BX000465.12 1 214999 +
8161915 8211914 84 N 50000 contig no
8211915 8391020 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 85 BX511183.6 1 179106 +
8391021 8441020 86 N 50000 contig no
8441021 8658260 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 87 BX004795.6 1 217240 +
8658261 8708260 88 N 50000 contig no
8708261 8758135 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 90 BX510921.8 1 49875 +
8758136 8911931 90 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 90 BX248416.3 2001 155796 +
8911932 8961931 91 N 50000 contig no
8961932 9032924 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 93 BX927096.16 2001 72993 -
9032925 9194085 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 93 AL935146.13 1 161161 -
9194086 9244085 94 N 50000 contig no
9244086 9411909 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 95 CR384108.7 1 167824 +
9411910 9461909 96 N 50000 contig no
9461910 9645139 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 97 BX649488.9 1 183230 +
9645140 9695139 98 N 50000 contig no
9695140 9899938 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 99 BX901926.19 1 204799 +
9899939 9949938 100 N 50000 contig no
9949939 10020078 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 101 CU462880.8 1 70140 +
10020079 10070078 102 N 50000 contig no
10070079 10206887 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 103 - 103 CU137686.6 1 136809 +
10206888 10256887 104 N 50000 contig no
10256888 10295960 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 105 AL929580.10 1 39073 +
10295961 10345960 106 N 50000 contig no
10345961 10395900 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 107 - 107 BX649373.4 1 49940 +
10395901 10445900 108 N 50000 contig no
10445901 10577380 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 109 CR927479.22 1 131480 +
10577381 10627380 110 N 50000 contig no
10627381 10780250 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 111 - 111 CU179698.11 1 152870 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH211-142P8
ctg120
zC142P8
EPN details
Submitted to EMBL
05-JUN-07
BX927094.13
finished
77143 CHORI-211 3' / 3'
77143 / 137628
- / -
2000
0
Identified
2005-01-15
find_overl...
badger
 
2 CH211-165I22
ctg120
zC165I22
EPN details
Analysed
25-MAR-04
AL929509.15
finished
139628 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
3 DKEY-72G22
ctg120
zK72G22
EPN details
Submitted to EMBL
12-JAN-09
CT027575.9
finished
39041 DanioKey        
  GAP (type-3) length unknown                  
5 CH211-195I21
ctg2087
zC195I21
EPN details
Submitted to EMBL
12-JAN-09
CR847569.14
finished
120175 CHORI-211 3' / 5'
120175 / 2001
- / -
2000
0
Identified
2005-11-17
find_overl...
badger
 
6 DKEY-33L16
ctg2087
zK33L16
EPN details
Analysed
16-NOV-05
CR628370.28
finished
190967 DanioKey 3' / 5'
190967 / 2001
- / -
2000
0
Identified
2012-06-29
find_overl...
humpub
 
7 DKEY-156I20
ctg2087
zK156I20
EPN details
Analysed
07-SEP-07
CU463157.4
finished
107300 DanioKey        
  GAP (type-3) length unknown                  
9 DKEY-77M18
ctg2099
zK77M18
EPN details
Submitted to EMBL
12-JAN-09
BX664624.5
finished
54818 DanioKey 5' / 5'
2001 / 1
- / -
2000
0
Identified
2003-12-12
find_overl...
badger
 
10 CH211-184B9
ctg2099
zC184B9
EPN details
Submitted to EMBL
12-JAN-09
BX072569.6
finished
144729 CHORI-211 3' / 3'
144729 / 120651
- / -
2000
0
Identified
2005-09-29
find_overl...
badger
 
11 DKEY-3E17
ctg2099
zK3E17
EPN details
Analysed
10-MAY-06
CR391993.14
finished
122651 DanioKey 5' / 3'
1 / 199881
- / -
2000
0
Identified
2005-09-29
find_overl...
badger
 
12 DKEYP-93A3
ctg2099
zKp93A3
EPN details
Submitted to EMBL
03-OCT-07
BX511219.7
finished
201881 DanioKeypilot        
  GAP (type-3) length unknown                  
14 CH211-278E17
ctg2102
zC278E17
EPN details
Analysed
09-SEP-03
BX248330.6
finished
189880 CHORI-211        
15 DKEY-179J5
ctg2102
zK179J5
EPN details
Submitted to EMBL
12-JAN-09
CR932977.11
finished
98867 DanioKey 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-08-03
find_overl...
badger
 
16 CH211-154A22
ctg2102
zC154A22
EPN details
Submitted to EMBL
12-JAN-09
BX548076.6
finished
175161 CHORI-211 3' / 5'
175161 / 2001
- / -
2000
0
Identified
2007-09-27
find_overl...
humpub
 
17 CH73-240C14
ctg2102
zH240C14
EPN details
Submitted to EMBL
12-JAN-09
CU463850.5
finished
30474 CHORI-73        
18 DKEY-240E12
ctg2102
zK240E12
EPN details
Submitted to EMBL
12-JAN-09
BX571958.11
finished
221392 DanioKey        
19 CH73-365D21
ctg2102
zH365D21
EPN details
Submitted to EMBL
12-JAN-09
CT025943.17
finished
111778 CHORI-73        
  GAP (type-3) length unknown                  
21 DKEY-180K24
ctg2111
zK180K24
EPN details
Submitted to EMBL
12-JAN-09
BX927070.10
finished
71970 DanioKey        
22 CH73-31I8
ctg2111
zH31I8
EPN details
Analysed
10-SEP-05
CT009669.5
finished
91024 CHORI-73        
  GAP (type-3) length unknown                  
24 DKEY-11H11
ctg2162
zK11H11
EPN details
Analysed
01-AUG-03
AL954725.9
finished
219971 DanioKey 3' / 3'
217971 / 148690
- / -
2000
0
Identified
2004-08-14
find_overl...
badger
 
25 CH211-39F23
ctg2162
zC39F23
EPN details
Analysed
10-AUG-04
BX465185.8
finished
148690 CHORI-211        
  GAP (type-3) length unknown                  
27 DKEY-53B10
ctg5012
zK53B10
EPN details
Analysed
19-OCT-06
BX936311.13
finished
192750 DanioKey        
28 CH73-13N19
ctg5012
zH13N19
EPN details
Analysed
28-MAR-09
FP102166.4
finished
70091 CHORI-73        
  GAP (type-3) length unknown                  
30 CH211-151I8
ctg6011
zC151I8
EPN details
Submitted to EMBL
12-JAN-09
CR847808.6
finished
147994 CHORI-211        
  GAP (type-3) length unknown                  
32 CH211-81L19
ctg6082
zC81L19
EPN details
Analysed
21-APR-07
CU074309.8
finished
155506 CHORI-211        
  GAP (type-3) length unknown                  
34 DKEY-257J24
ctg6097
zK257J24
EPN details
Submitted to EMBL
12-JAN-09
BX927259.8
finished
18652 DanioKey 3' / 3'
18652 / 139886
- / -
2000
0
Identified
2010-07-06
find_overl...
humpub
 
35 CH211-271K12
ctg6097
zC271K12
EPN details
Submitted to EMBL
12-JAN-09
BX897656.9
finished
141840 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2005-04-01
find_overl...
badger
 
36 CH211-185L6
ctg6097
zC185L6
EPN details
Analysed
16-JUN-05
CR936319.5
finished
4419 CHORI-211        
  GAP (type-3) length unknown                  
38 DKEY-101P20
ctg6142
zK101P20
EPN details
Analysed
03-JUN-05
BX901976.22
finished
201928 DanioKey        
  GAP (type-3) length unknown                  
40 CH211-140C22
ctg6181
zC140C22
EPN details
Analysed
06-JUL-05
BX927248.6
finished
81373 CHORI-211 3' / 5'
81373 / 2001
- / -
2000
0
Identified
2005-06-17
find_overl...
badger
 
41 CH211-147M4
ctg6181
zC147M4
EPN details
Analysed
09-JUN-04
BX321879.14
finished
162923 CHORI-211 3' / 5'
162923 / 35258
- / -
35339
0.25
Identified
2006-10-05
find_overl...
badger
 
42 CH211-195A16
ctg6181
zC195A16
EPN details
Analysed
29-SEP-06
CR385085.10
finished
211060 CHORI-211 3' / 5'
211060 / 2001
- / -
2000
0
Identified
2006-10-12
find_overl...
badger
 
43 CH211-206G18
ctg6181
zC206G18
EPN details
Analysed
07-OCT-06
CR855315.5
finished
5964 CHORI-211 3' / 5'
5964 / 2001
- / -
2000
0
Identified
2006-10-12
find_overl...
badger
 
44 DKEY-222P23
ctg6181
zK222P23
EPN details
Analysed
07-OCT-06
CR926460.7
finished
26686 DanioKey        
  GAP (type-3) length unknown                  
46 DKEY-39A4
ctg6201
zK39A4
EPN details
Submitted to EMBL
05-JUN-07
BX957240.10
finished
108385 DanioKey        
  GAP (type-3) length unknown                  
48 CH211-182N24
ctg6350
zC182N24
EPN details
Analysed
18-MAR-05
BX005078.32
finished
135288 CHORI-211 5' / 3'
1 / 73725
- / -
2000
0
Identified
2005-06-11
find_overl...
badger
 
49 DKEY-18D13
ctg6350
zK18D13
EPN details
Submitted to EMBL
12-JAN-09
BX640455.19
finished
75725 DanioKey 5' / 5'
1 / 1979
- / -
2000
0
Identified
2010-07-06
find_overl...
humpub
 
50 DKEY-232H18
ctg6350
zK232H18
EPN details
Submitted to EMBL
12-JAN-09
BX571946.9
finished
179796 DanioKey        
  GAP (type-3) length unknown                  
52 CH211-14C11
ctg6381
Cl/Pr zC14C11/zC129H24 swap
EPN details
Analysed
21-JUN-05
BX640467.12
finished
111504 CHORI-211        
  GAP (type-3) length unknown                  
54 CH211-288B23
ctg6394
zC288B23
EPN details
Analysed
14-AUG-04
BX927140.10
finished
125248 CHORI-211 5' / 3'
2001 / 186690
- / -
2000
0
Identified
2004-07-30
find_overl...
badger
 
55 CH211-15A18
ctg6394
zC15A18
EPN details
Analysed
13-JUN-03
BX005009.11
finished
186690 CHORI-211        
  GAP (type-3) length unknown                  
57 CH211-128N21
ctg6422
zC128N21
EPN details
Submitted to EMBL
05-JUN-07
AL772158.6
finished
178046 CHORI-211 5' / 3'
1 / 115375
- / -
62851
0.12
Identified
2003-07-03
find_overl...
badger
 
58 CH211-159C12
ctg6422
zC159C12
EPN details
Submitted to EMBL
05-JUN-07
BX005362.6
finished
178151 CHORI-211 5' / 3'
1 / 10563
- / -
2000
0
Identified
2008-07-03
find_overl...
humpub
 
59 CH211-111N6
ctg6422
zC111N6
EPN details
Submitted to EMBL
12-JAN-09
CR735122.6
finished
12563 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2008-07-03
find_overl...
humpub
 
60 CH211-91I13
ctg6422
zC91I13
EPN details
Analysed
11-FEB-04
BX649552.3
finished
163544 CHORI-211 3' / 5'
163544 / 2001
- / -
2000
0
Identified
2004-07-02
find_overl...
badger
 
61 DKEY-262O11
ctg6422
zK262O11
EPN details
Submitted to EMBL
05-JUN-07
BX908764.11
finished
130230 DanioKey        
  GAP (type-3) length unknown                  
63 DKEY-30G10
ctg6470
zK30G10
EPN details
Analysed
11-MAR-04
BX664629.10
finished
256437 DanioKey        
  GAP (type-3) length unknown                  
65 DKEY-51M5
ctg6471
zK51M5
EPN details
Submitted to EMBL
12-JAN-09
CR394541.16
finished
64881 DanioKey 3' / 5'
64881 / 2001
- / -
2000
0
Identified
2004-10-29
find_overl...
badger
 
66 CH211-195B2
ctg6471
zC195B2
EPN details
Submitted to EMBL
05-JUN-07
BX255931.5
finished
189327 CHORI-211 3' / 5'
189327 / 2001
- / -
2000
0
Identified
2004-11-26
find_overl...
badger
 
67 DKEY-268M13
ctg6471
zK268M13
EPN details
Submitted to EMBL
05-JUN-07
BX293565.25
finished
160930 DanioKey        
  GAP (type-3) length unknown                  
69 DKEY-101H20
ctg6473
zK101H20
EPN details
Analysed
05-JAN-05
BX957261.10
finished
44139 DanioKey 3' / 5'
44139 / 2001
- / -
2000
0
Identified
2005-01-15
find_overl...
badger
 
70 CH211-198E14
ctg6473
zC198E14
EPN details
Analysed
12-FEB-04
AL935286.14
finished
211297 CHORI-211        
  GAP (type-3) length unknown                  
72 CH211-217A1
ctg6492
zC217A1
EPN details
Submitted to EMBL
12-JAN-09
AL954702.9
finished
201021 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2005-07-23
find_overl...
badger
 
73 DKEY-176M8
ctg6492
zK176M8
EPN details
Submitted to EMBL
12-JAN-09
CR936284.10
finished
6350 DanioKey 3' / 3'
6350 / 218740
- / -
2000
0
Identified
2005-07-23
find_overl...
badger
 
74 DKEY-164M7
ctg6492
zK164M7
EPN details
Submitted to EMBL
12-JAN-09
BX005388.20
finished
220740 DanioKey        
75 DKEY-193B19
ctg6492
zK193B19
EPN details
Submitted to EMBL
12-JAN-09
BX936370.5
finished
97862 DanioKey        
  GAP (type-3) length unknown                  
77 DKEY-30A6
ctg6493
zK30A6
EPN details
Analysed
03-OCT-03
BX000465.12
finished
214999 DanioKey        
  GAP (type-3) length unknown                  
79 CH211-51F18
ctg6495
zC51F18
EPN details
Submitted to EMBL
05-JUN-07
BX511183.6
finished
179106 CHORI-211        
  GAP (type-3) length unknown                  
81 DKEY-29D12
ctg6547
zK29D12
EPN details
Submitted to EMBL
05-JUN-07
BX004795.6
finished
217240 DanioKey        
  GAP (type-3) length unknown                  
83 DKEY-13C13
ctg6620
zK13C13
EPN details
Submitted to EMBL
12-JAN-09
BX510921.8
finished
49875 DanioKey 3' / 5'
49875 / 2001
- / -
2000
0
Identified
2003-10-10
find_overl...
badger
 
84 DKEY-75L1
ctg6620
zK75L1
EPN details
Submitted to EMBL
12-JAN-09
BX248416.3
finished
155796 DanioKey        
  GAP (type-3) length unknown                  
86 CH211-262J3
ctg6678
zC262J3
EPN details
Analysed
25-FEB-05
BX927096.16
finished
72993 CHORI-211 5' / 3'
2001 / 161161
- / -
2000
0
Commented
2005-12-07
edit_overl...
gjc
 
87 CH211-171D11
ctg6678
zC171D11
EPN details
Submitted to EMBL
05-JUN-07
AL935146.13
finished
161161 CHORI-211        
  GAP (type-3) length unknown                  
89 DKEYP-26H11
ctg6712
zKp26H11
EPN details
Submitted to EMBL
05-JUN-07
CR384108.7
finished
167824 DanioKeypilot        
  GAP (type-3) length unknown                  
91 DKEY-21O6
ctg6793
zK21O6
EPN details
Submitted to EMBL
12-JAN-09
BX649488.9
finished
183230 DanioKey        
  GAP (type-3) length unknown                  
93 CH211-195N20
ctg7096
zC195N20
EPN details
Analysed
13-APR-06
BX901926.19
finished
204799 CHORI-211        
  GAP (type-3) length unknown                  
95 DKEY-9N18
ctg7096_1
zK9N18
EPN details
Submitted to EMBL
12-JAN-09
CU462880.8
finished
70140 DanioKey        
  GAP (type-3) length unknown                  
97 DKEY-211E20
ctg62
zK211E20
EPN details
Submitted to EMBL
12-JAN-09
CU137686.6
finished
136809 DanioKey        
  GAP (type-3) length unknown                  
99 CH211-42G15
ctg67
zC42G15
EPN details
Submitted to EMBL
12-JAN-09
AL929580.10
finished
39073 CHORI-211        
  GAP (type-3) length unknown                  
101 CH211-270E10
ctg69
zC270E10
EPN details
Submitted to EMBL
03-OCT-07
BX649373.4
finished
49940 CHORI-211        
  GAP (type-3) length unknown                  
103 CH73-111B21
ctg3
zH111B21
EPN details
Analysed
18-AUG-06
CR927479.22
finished
131480 CHORI-73        
  GAP (type-3) length unknown                  
105 CH211-134K14
ctg92
zC134K14
EPN details
Analysed
31-JUL-07
CU179698.11
finished
152870 CHORI-211        

Statistics

Clone Summary

Number of gaps
34
Gap types
type-3
34
Total clones
71
Clone HTGS Phases
finished
71
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
154,190
Total finished length of fin clones w/ overlap
9,204,215
Total finished length of fin clones w/o overlap
9,050,025
Total overlap length of fin+unfin clones
154,190
Total finished length of fin+unfin clones w/ overlap
9,204,215
Total finished length of fin+unfin clones w/o overlap
9,050,025

Search

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Other links

* quick link - http://q.sanger.ac.uk/de95475m