ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region H_11 (TPF updated: 2016-09-27)

TPF

Help

# Clone ext/Contig Clone int Acc/Fin
1 DKEY-38O15
ctg1062
zK38O15
EPN details
CR855388.18
finished
2 CH211-225A3
ctg1062
zC225A3
EPN details
BX119908.8
finished
3 CH211-171D6
ctg1062
zC171D6
EPN details
AL935027.13
finished
  GAP (type-3) length unknown    
5 CH211-119M14
ctg1074
zC119M14
EPN details
CU019623.5
finished
  GAP (type-3) length unknown    
7 DKEY-43J14
ctg1087
zK43J14
EPN details
CR846086.14
finished
  GAP (type-3) length unknown    
9 CH211-232N15
ctg1091
zC232N15
EPN details
CR735106.9
finished
10 DKEY-216M6
ctg1091
zK216M6
EPN details
CR847999.10
finished
  GAP (type-3) length unknown    
12 CH211-139N7
ctg1098
zC139N7
EPN details
BX649420.2
finished
13 DKEY-27K11
ctg1098
zK27K11
EPN details
BX663532.4
finished
  GAP (type-3) length unknown    
15 DKEY-105D16
ctg1112
zK105D16
EPN details
CT573193.8
finished
  GAP (type-3) length unknown    
17 DKEY-226F21
ctg1136
zK226F21
EPN details
CR848830.7
finished
18 DKEY-222O19
ctg1136
zK222O19
EPN details
BX072582.6
finished
19 CH211-195H1
ctg1136
zC195H1
EPN details
BX927242.14
finished
  GAP (type-3) length unknown    
21 CH211-127N10
ctg1138
zC127N10
EPN details
AL928821.6
finished
  GAP (type-3) length unknown    
23 CH211-25H8
ctg1141
zC25H8
EPN details
CR450731.8
finished
24 DKEY-18M7
ctg1141
zK18M7
EPN details
BX571983.12
finished
  GAP (type-3) length unknown    
26 DKEY-239B8
ctg1274
Cl/Pr zK239B8/zK220L13 swap
EPN details
CR854896.11
finished
  GAP (type-3) length unknown    
28 DKEY-170I11
ctg1361
zK170I11
EPN details
BX323086.4
finished
  GAP (type-3) length unknown    
30 DKEYP-19G9
ctg2138
zKp19G9
EPN details
BX890603.17
finished
  GAP (type-3) length unknown    
32 DKEY-283C16
ctg2538
zK283C16
EPN details
CR381687.17
finished
  GAP (type-3) length unknown    
34 DKEY-208K8
ctg2583
zK208K8
EPN details
CR926911.13
finished
  GAP (type-3) length unknown    
36 RP71-7E23
ctg2917
bZ7E23
EPN details
CT997808.7
finished
37 CH211-267N8
ctg2917
zC267N8
EPN details
CR786569.13
finished
  GAP (type-3) length unknown    
39 CH211-63H10
ctg320
zC63H10
EPN details
BX470231.8
finished
  GAP (type-3) length unknown    
41 CH211-193L17
ctg4550
zC193L17
EPN details
BX682549.8
finished
  GAP (type-3) length unknown    
43 DKEY-15D15
ctg6006
zK15D15
EPN details
CU207258.9
finished
  GAP (type-3) length unknown    
45 CH211-22C7
ctg6013
zC22C7
EPN details
CU179657.6
finished
  GAP (type-3) length unknown    
47 DKEY-43B13
ctg6101
zK43B13
EPN details
CR749176.14
finished
  GAP (type-3) length unknown    
49 CH211-150M24
ctg6103
zC150M24
EPN details
CU467617.6
finished
  GAP (type-3) length unknown    
51 CH211-196D14
ctg6209
zC196D14
EPN details
AL772274.8
finished
52 CH211-219C23
ctg6209
zC219C23
EPN details
CR545461.6
finished
53 CH211-78C14
ctg6209
zC78C14
EPN details
CR450690.7
finished
  GAP (type-3) length unknown    
55 CH211-112P19
ctg6532
zC112P19
EPN details
BX936363.13
finished
  GAP (type-3) length unknown    
57 CH211-13I11
ctg6559
zC13I11
EPN details
CR352237.9
finished
  GAP (type-3) length unknown    
59 RP71-8E8
ctg6562
bZ8E8
EPN details
BX465223.9
finished
  GAP (type-3) length unknown    
61 CH211-185C9
ctg6721
zC185C9
EPN details
BX004882.10
finished
62 DKEY-53H9
ctg6721
zK53H9
EPN details
AL929596.11
finished
63 DKEY-221L8
ctg6721
zK221L8
EPN details
BX088601.12
finished
64 DKEYP-29C12
ctg6721
zKp29C12
EPN details
CR931977.8
finished
  GAP (type-3) length unknown    
66 CH211-119A10
ctg6738
zC119A10
EPN details
BX957335.12
finished
  GAP (type-3) length unknown    
68 DKEY-27P12
ctg6740
zK27P12
EPN details
CR388183.14
finished
  GAP (type-3) length unknown    
70 DKEY-113M9
ctg6748
zK113M9
EPN details
AL844522.7
finished
  GAP (type-3) length unknown    
72 DKEY-29P20
ctg6754
zK29P20
EPN details
AL974308.13
finished
73 DKEY-13A21
ctg6754
zK13A21
EPN details
AL844847.6
finished
  GAP (type-3) length unknown    
75 DKEYP-38C9
ctg6755
zKp38C9
EPN details
CR926125.7
finished
76 CH211-194H2
ctg6755
zC194H2
EPN details
BX511229.6
finished
  GAP (type-3) length unknown    
78 DKEY-181H1
ctg6804
zK181H1
EPN details
BX537269.8
finished
79 DKEYP-120E12
ctg6804
zKp120E12
EPN details
BX537275.8
finished
  GAP (type-3) length unknown    
81 CH211-197M2
ctg7014
zC197M2
EPN details
BX572645.26
finished
  GAP (type-3) length unknown    
83 DKEY-150P14
ctg7015
zK150P14
EPN details
CR450705.8
finished
  GAP (type-3) length unknown    
85 DKEY-87G10
ctg7016
zK87G10
EPN details
CR925739.5
finished
86 CH211-278L13
ctg7016
zC278L13
EPN details
BX470258.4
finished
87 CH211-249J24
ctg7016
zC249J24
EPN details
CR450709.12
finished
  GAP (type-3) length unknown    
89 DKEY-197A13
ctg7017
zK197A13
EPN details
BX530087.7
finished
  GAP (type-3) length unknown    
91 CH211-145C5
ctg7018
zC145C5
EPN details
AL929306.4
finished
92 DKEY-47L19
ctg7018
zK47L19
EPN details
AL954663.13
finished
93 CH211-14L11
ctg7018
zC14L11
EPN details
BX001059.6
finished
  GAP (type-3) length unknown    
95 DKEY-6H1
ctg7019
zK6H1
EPN details
BX572634.7
finished
96 DKEYP-86G5
ctg7019
zKp86G5
EPN details
BX572081.6
finished
  GAP (type-3) length unknown    
98 CH211-209J5
ctg7116
zC209J5
EPN details
BX572639.11
finished
99 DKEY-205E15
ctg7116
zK205E15
EPN details
CR550305.7
finished
  GAP (type-3) length unknown    
101 DKEY-22M10
ctg7127
zK22M10
EPN details
CR931725.6
finished
  GAP (type-3) length unknown    
103 DKEY-182B23
ctg7129
zK182B23
EPN details
BX571941.4
finished
104 CH211-51L17
ctg7129
zC51L17
EPN details
BX548064.12
finished
  GAP (type-3) length unknown    
106 DKEY-21N20
ctg7130
zK21N20
EPN details
BX293556.14
finished
  GAP (type-3) length unknown    
108 CH211-264G11
ctg7163
zC264G11
EPN details
CR847969.6
finished
  GAP (type-3) length unknown    
110 DKEY-29F2
ctg7197
zK29F2
EPN details
BX005343.18
finished
  GAP (type-3) length unknown    
112 DKEY-35H11
ctg7198
zK35H11
EPN details
BX279524.5
finished
  GAP (type-3) length unknown    
114 CH211-198E12
ctg7204
zC198E12
EPN details
BX640548.14
finished
  GAP (type-3) length unknown    
116 DKEY-231O6
ctg7204_1
zK231O6
EPN details
CU302307.5
finished
  GAP (type-3) length unknown    
118 CH211-258B5
ctg2
zC258B5
EPN details
LO017645.1
contiguous
  GAP (type-3) length unknown    
120 CH211-11G6
ctg85
zC11G6
EPN details
CT033846.15
finished
  GAP (type-3) length unknown    
122 ZFOS-965F2
ctg58
zF965F2
EPN details
FO834832.1
unfinished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 144763 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 CR855388.18 1 144763 +
144764 149763 2 N 5000 No overlap in database    
149764 271565 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 4 BX119908.8 1 121802 +
271566 323558 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 4 AL935027.13 2001 53993 +
323559 373558 5 N 50000 contig no
373559 425813 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 6 - 6 CU019623.5 1 52255 +
425814 475813 7 N 50000 contig no
475814 702365 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 8 - 8 CR846086.14 1 226552 +
702366 752365 9 N 50000 contig no
752366 920194 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 10 CR735106.9 1 167829 +
920195 925194 11 N 5000 No overlap in database    
925195 1117385 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 12 CR847999.10 1 192191 +
1117386 1167385 13 N 50000 contig no
1167386 1334243 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 14 - 15 BX649420.2 1 166858 -
1334244 1404235 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 14 - 15 BX663532.4 2001 71992 +
1404236 1454235 16 N 50000 contig no
1454236 1599152 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 17 CT573193.8 1 144917 +
1599153 1649152 18 N 50000 contig no
1649153 1741266 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 21 CR848830.7 1 92114 +
1741267 1934184 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 21 BX072582.6 2001 194918 +
1934185 2126794 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 21 BX927242.14 2001 194610 +
2126795 2176794 22 N 50000 contig no
2176795 2330026 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 23 AL928821.6 1 153232 +
2330027 2380026 24 N 50000 contig no
2380027 2397569 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 26 CR450731.8 1 17543 +
2397570 2644498 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 26 BX571983.12 2001 248929 +
2644499 2694498 27 N 50000 contig no
2694499 2860054 28 FClick to retrieve finished assembled sequence in green bar: rank(s) 28 - 28 CR854896.11 1 165556 +
2860055 2910054 29 N 50000 contig no
2910055 3093080 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 30 - 30 BX323086.4 1 183026 +
3093081 3143080 31 N 50000 contig no
3143081 3327791 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 32 - 32 BX890603.17 1 184711 +
3327792 3377791 33 N 50000 contig no
3377792 3580316 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 34 - 34 CR381687.17 1 202525 +
3580317 3630316 35 N 50000 contig no
3630317 3788938 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 36 - 36 CR926911.13 1 158622 +
3788939 3838938 37 N 50000 contig no
3838939 3941836 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 39 CT997808.7 2001 104898 -
3941837 4080835 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 39 CR786569.13 1 138999 -
4080836 4130835 40 N 50000 contig no
4130836 4311613 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 41 BX470231.8 1 180778 +
4311614 4361613 42 N 50000 contig no
4361614 4513173 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 43 BX682549.8 1 151560 +
4513174 4563173 44 N 50000 contig no
4563174 4781091 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 45 CU207258.9 1 217918 +
4781092 4831091 46 N 50000 contig no
4831092 5021351 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 47 CU179657.6 1 190260 +
5021352 5071351 48 N 50000 contig no
5071352 5309000 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 49 CR749176.14 1 237649 +
5309001 5359000 50 N 50000 contig no
5359001 5507291 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 51 CU467617.6 1 148291 +
5507292 5557291 52 N 50000 contig no
5557292 5746917 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 AL772274.8 1 189626 +
5746918 5748911 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 CR545461.6 2001 3994 +
5748912 5910239 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 CR450690.7 2001 163328 +
5910240 5960239 56 N 50000 contig no
5960240 6145088 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 57 BX936363.13 1 184849 +
6145089 6195088 58 N 50000 contig no
6195089 6388736 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 59 CR352237.9 1 193648 +
6388737 6438736 60 N 50000 contig no
6438737 6621965 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 61 BX465223.9 1 183229 +
6621966 6671965 62 N 50000 contig no
6671966 6809442 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 66 BX004882.10 1 137477 +
6809443 6999316 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 66 AL929596.11 2001 191874 +
6999317 7030783 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 66 BX088601.12 2001 33467 +
7030784 7111994 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 66 CR931977.8 2001 83211 +
7111995 7161994 67 N 50000 contig no
7161995 7330438 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 68 - 68 BX957335.12 1 168444 +
7330439 7380438 69 N 50000 contig no
7380439 7613009 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 70 - 70 CR388183.14 1 232571 +
7613010 7663009 71 N 50000 contig no
7663010 7856202 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 72 - 72 AL844522.7 1 193193 +
7856203 7906202 73 N 50000 contig no
7906203 8084713 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 75 AL974308.13 1 178511 +
8084714 8319887 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 75 AL844847.6 1 235174 +
8319888 8369887 76 N 50000 contig no
8369888 8432379 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 CR926125.7 1 62492 +
8432380 8642365 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 BX511229.6 2001 211986 +
8642366 8692365 79 N 50000 contig no
8692366 8765490 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 81 BX537269.8 1 73125 +
8765491 8889838 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 81 BX537275.8 49284 173631 +
8889839 8939838 82 N 50000 contig no
8939839 9052577 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 83 BX572645.26 1 112739 +
9052578 9102577 84 N 50000 contig no
9102578 9107285 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 85 CR450705.8 1 4708 +
9107286 9157285 86 N 50000 contig no
9157286 9288808 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 87 CR925739.5 1 131523 +
9288809 9293808 88 N 5000 No overlap in database    
9293809 9478434 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 89 BX470258.4 1 184626 +
9478435 9483434 90 N 5000 No overlap in database    
9483435 9641179 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 91 CR450709.12 1 157745 +
9641180 9691179 92 N 50000 contig no
9691180 9713416 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 93 BX530087.7 1 22237 +
9713417 9763416 94 N 50000 contig no
9763417 9863412 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 97 AL929306.4 76227 176222 -
9863413 10075959 96 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 97 AL954663.13 2000 214546 -
10075960 10156399 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 97 BX001059.6 1 80440 -
10156400 10206399 98 N 50000 contig no
10206400 10408860 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 100 BX572634.7 1 202461 +
10408861 10559008 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 100 BX572081.6 2001 152148 +
10559009 10609008 101 N 50000 contig no
10609009 10754697 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 103 BX572639.11 1 145689 +
10754698 10911758 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 103 CR550305.7 2001 159061 +
10911759 10961758 104 N 50000 contig no
10961759 11167057 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 105 CR931725.6 1 205299 +
11167058 11217057 106 N 50000 contig no
11217058 11264102 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 107 - 108 BX571941.4 2001 49045 -
11264103 11444303 108 FClick to retrieve finished assembled sequence in green bar: rank(s) 107 - 108 BX548064.12 1 180201 -
11444304 11494303 109 N 50000 contig no
11494304 11707183 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 110 - 110 BX293556.14 1 212880 +
11707184 11757183 111 N 50000 contig no
11757184 11881404 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 112 CR847969.6 1 124221 +
11881405 11931404 113 N 50000 contig no
11931405 12167102 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 114 - 114 BX005343.18 1 235698 +
12167103 12217102 115 N 50000 contig no
12217103 12374542 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 116 - 116 BX279524.5 1 157440 +
12374543 12424542 117 N 50000 contig no
12424543 12656129 118 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 118 BX640548.14 1 231587 +
12656130 12706129 119 N 50000 contig no
12706130 12884576 120 FClick to retrieve finished assembled sequence in green bar: rank(s) 120 - 120 CU302307.5 1 178447 +
12884577 12934576 121 N 50000 contig no
12934577 13087714 122 A LO017645.1 1 153138 +
13087715 13137714 123 N 50000 contig no
13137715 13309755 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 124 - 124 CT033846.15 1 172041 +
13309756 13359755 125 N 50000 contig no
13359756 13409755 126 N 50000 clone no

Details

Help

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 DKEY-38O15
ctg1062
zK38O15
-
-
CR855388.18
finished
144763 DanioKey        
2 CH211-225A3
ctg1062
zC225A3
-
-
BX119908.8
finished
121802 CHORI-211 3' / 5'
121802 / 2001
- / -
2000
0
Identified
2004-02-18
find_overl...
badger
 
3 CH211-171D6
ctg1062
zC171D6
-
-
AL935027.13
finished
53993 CHORI-211        
  GAP (type-3) length unknown                  
5 CH211-119M14
ctg1074
zC119M14
-
-
CU019623.5
finished
52255 CHORI-211        
  GAP (type-3) length unknown                  
7 DKEY-43J14
ctg1087
zK43J14
-
-
CR846086.14
finished
226552 DanioKey        
  GAP (type-3) length unknown                  
9 CH211-232N15
ctg1091
zC232N15
-
-
CR735106.9
finished
167829 CHORI-211        
10 DKEY-216M6
ctg1091
zK216M6
-
-
CR847999.10
finished
192191 DanioKey        
  GAP (type-3) length unknown                  
12 CH211-139N7
ctg1098
zC139N7
-
-
BX649420.2
finished
166858 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2003-11-28
find_overl...
badger
 
13 DKEY-27K11
ctg1098
zK27K11
-
-
BX663532.4
finished
71992 DanioKey        
  GAP (type-3) length unknown                  
15 DKEY-105D16
ctg1112
zK105D16
-
-
CT573193.8
finished
144917 DanioKey        
  GAP (type-3) length unknown                  
17 DKEY-226F21
ctg1136
zK226F21
-
-
CR848830.7
finished
92114 DanioKey 3' / 5'
92114 / 2001
- / -
2000
0
Identified
2006-06-03
find_overl...
badger
 
18 DKEY-222O19
ctg1136
zK222O19
-
-
BX072582.6
finished
194918 DanioKey 3' / 5'
194918 / 2001
- / 51
2021
0.0499999999999998
Identified
2010-07-06
find_overl...
humpub
 
19 CH211-195H1
ctg1136
zC195H1
-
-
BX927242.14
finished
194610 CHORI-211        
  GAP (type-3) length unknown                  
21 CH211-127N10
ctg1138
zC127N10
-
-
AL928821.6
finished
153232 CHORI-211        
  GAP (type-3) length unknown                  
23 CH211-25H8
ctg1141
zC25H8
-
-
CR450731.8
finished
17543 CHORI-211 3' / 5'
17543 / 2001
- / -
2000
0
Identified
2006-07-13
find_overl...
badger
 
24 DKEY-18M7
ctg1141
zK18M7
-
-
BX571983.12
finished
248929 DanioKey        
  GAP (type-3) length unknown                  
26 DKEY-239B8
ctg1274
zK239B8
-
-
CR854896.11
finished
165556 DanioKey        
  GAP (type-3) length unknown                  
28 DKEY-170I11
ctg1361
zK170I11
-
-
BX323086.4
finished
183026 DanioKey        
  GAP (type-3) length unknown                  
30 DKEYP-19G9
ctg2138
zKp19G9
-
-
BX890603.17
finished
184711 DanioKeypilot        
  GAP (type-3) length unknown                  
32 DKEY-283C16
ctg2538
zK283C16
-
-
CR381687.17
finished
202525 DanioKey        
  GAP (type-3) length unknown                  
34 DKEY-208K8
ctg2583
zK208K8
-
-
CR926911.13
finished
158622 DanioKey        
  GAP (type-3) length unknown                  
36 RP71-7E23
ctg2917
bZ7E23
-
-
CT997808.7
finished
104898 RPCI-71 5' / 3'
2001 / 138999
- / -
2000
0
Identified
2007-07-11
find_overl...
gjc
 
37 CH211-267N8
ctg2917
zC267N8
-
-
CR786569.13
finished
138999 CHORI-211        
  GAP (type-3) length unknown                  
39 CH211-63H10
ctg320
zC63H10
-
-
BX470231.8
finished
180778 CHORI-211        
  GAP (type-3) length unknown                  
41 CH211-193L17
ctg4550
zC193L17
-
-
BX682549.8
finished
151560 CHORI-211        
  GAP (type-3) length unknown                  
43 DKEY-15D15
ctg6006
zK15D15
-
-
CU207258.9
finished
217918 DanioKey        
  GAP (type-3) length unknown                  
45 CH211-22C7
ctg6013
zC22C7
-
-
CU179657.6
finished
190260 CHORI-211        
  GAP (type-3) length unknown                  
47 DKEY-43B13
ctg6101
zK43B13
-
-
CR749176.14
finished
237649 DanioKey        
  GAP (type-3) length unknown                  
49 CH211-150M24
ctg6103
zC150M24
-
-
CU467617.6
finished
148291 CHORI-211        
  GAP (type-3) length unknown                  
51 CH211-196D14
ctg6209
zC196D14
-
-
AL772274.8
finished
189626 CHORI-211 3' / 5'
189626 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
52 CH211-219C23
ctg6209
zC219C23
-
-
CR545461.6
finished
3994 CHORI-211 3' / 5'
3994 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
53 CH211-78C14
ctg6209
zC78C14
-
-
CR450690.7
finished
163328 CHORI-211        
  GAP (type-3) length unknown                  
55 CH211-112P19
ctg6532
zC112P19
-
-
BX936363.13
finished
184849 CHORI-211        
  GAP (type-3) length unknown                  
57 CH211-13I11
ctg6559
zC13I11
-
-
CR352237.9
finished
193648 CHORI-211        
  GAP (type-3) length unknown                  
59 RP71-8E8
ctg6562
bZ8E8
-
-
BX465223.9
finished
183229 RPCI-71        
  GAP (type-3) length unknown                  
61 CH211-185C9
ctg6721
zC185C9
-
-
BX004882.10
finished
137477 CHORI-211 3' / 5'
137477 / 2001
- / -
2000
0
Identified
2004-02-27
find_overl...
badger
 
62 DKEY-53H9
ctg6721
zK53H9
-
-
AL929596.11
finished
191874 DanioKey 3' / 5'
191874 / 2001
- / -
2000
0
Identified
2004-01-23
find_overl...
badger
 
63 DKEY-221L8
ctg6721
zK221L8
-
-
BX088601.12
finished
33467 DanioKey 3' / 5'
33467 / 2001
- / -
2000
0
Identified
2006-05-20
find_overl...
badger
 
64 DKEYP-29C12
ctg6721
zKp29C12
-
-
CR931977.8
finished
83211 DanioKeypilot        
  GAP (type-3) length unknown                  
66 CH211-119A10
ctg6738
zC119A10
-
-
BX957335.12
finished
168444 CHORI-211        
  GAP (type-3) length unknown                  
68 DKEY-27P12
ctg6740
zK27P12
-
-
CR388183.14
finished
232571 DanioKey        
  GAP (type-3) length unknown                  
70 DKEY-113M9
ctg6748
zK113M9
-
-
AL844522.7
finished
193193 DanioKey        
  GAP (type-3) length unknown                  
72 DKEY-29P20
ctg6754
zK29P20
-
-
AL974308.13
finished
180511 DanioKey 3' / 5'
178511 / 1
- / -
2000
0
Identified
2003-07-25
find_overl...
badger
 
73 DKEY-13A21
ctg6754
zK13A21
-
-
AL844847.6
finished
235174 DanioKey        
  GAP (type-3) length unknown                  
75 DKEYP-38C9
ctg6755
zKp38C9
-
-
CR926125.7
finished
62492 DanioKeypilot 3' / 5'
62492 / 2001
- / -
2000
0
Identified
2006-06-10
find_overl...
badger
 
76 CH211-194H2
ctg6755
zC194H2
-
-
BX511229.6
finished
211986 CHORI-211        
  GAP (type-3) length unknown                  
78 DKEY-181H1
ctg6804
zK181H1
-
-
BX537269.8
finished
73125 DanioKey 3' / 5'
73125 / 49284
- / -
49283
0.02
Identified
2004-04-09
find_overl...
badger
 
79 DKEYP-120E12
ctg6804
zKp120E12
-
-
BX537275.8
finished
173631 DanioKeypilot        
  GAP (type-3) length unknown                  
81 CH211-197M2
ctg7014
zC197M2
-
-
BX572645.26
finished
112739 CHORI-211        
  GAP (type-3) length unknown                  
83 DKEY-150P14
ctg7015
zK150P14
-
-
CR450705.8
finished
4708 DanioKey        
  GAP (type-3) length unknown                  
85 DKEY-87G10
ctg7016
zK87G10
-
-
CR925739.5
finished
131523 DanioKey        
86 CH211-278L13
ctg7016
zC278L13
-
-
BX470258.4
finished
184626 CHORI-211        
87 CH211-249J24
ctg7016
zC249J24
-
-
CR450709.12
finished
157745 CHORI-211        
  GAP (type-3) length unknown                  
89 DKEY-197A13
ctg7017
zK197A13
-
-
BX530087.7
finished
22237 DanioKey        
  GAP (type-3) length unknown                  
91 CH211-145C5
ctg7018
zC145C5
-
-
AL929306.4
finished
176222 CHORI-211 5' / 3'
76227 / 214546
76226 / -
10209
0.02
Identified
2003-10-03
find_overl...
badger
 
92 DKEY-47L19
ctg7018
zK47L19
-
-
AL954663.13
finished
224753 DanioKey 5' / 3'
2000 / 80440
- / -
2000
0.05
Identified
2003-10-03
find_overl...
badger
 
93 CH211-14L11
ctg7018
zC14L11
-
-
BX001059.6
finished
80440 CHORI-211        
  GAP (type-3) length unknown                  
95 DKEY-6H1
ctg7019
zK6H1
-
-
BX572634.7
finished
202461 DanioKey 3' / 5'
202461 / 2001
- / -
2000
0
Identified
2004-11-06
find_overl...
badger
 
96 DKEYP-86G5
ctg7019
zKp86G5
-
-
BX572081.6
finished
152148 DanioKeypilot        
  GAP (type-3) length unknown                  
98 CH211-209J5
ctg7116
zC209J5
-
-
BX572639.11
finished
145689 CHORI-211 3' / 5'
145689 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
99 DKEY-205E15
ctg7116
zK205E15
-
-
CR550305.7
finished
159061 DanioKey        
  GAP (type-3) length unknown                  
101 DKEY-22M10
ctg7127
zK22M10
-
-
CR931725.6
finished
205299 DanioKey        
  GAP (type-3) length unknown                  
103 DKEY-182B23
ctg7129
zK182B23
-
-
BX571941.4
finished
49045 DanioKey 5' / 3'
2001 / 180201
- / -
2000
0
Identified
2004-11-06
find_overl...
badger
 
104 CH211-51L17
ctg7129
zC51L17
-
-
BX548064.12
finished
180201 CHORI-211        
  GAP (type-3) length unknown                  
106 DKEY-21N20
ctg7130
zK21N20
-
-
BX293556.14
finished
212880 DanioKey        
  GAP (type-3) length unknown                  
108 CH211-264G11
ctg7163
zC264G11
-
-
CR847969.6
finished
124221 CHORI-211        
  GAP (type-3) length unknown                  
110 DKEY-29F2
ctg7197
zK29F2
-
-
BX005343.18
finished
235698 DanioKey        
  GAP (type-3) length unknown                  
112 DKEY-35H11
ctg7198
zK35H11
-
-
BX279524.5
finished
157440 DanioKey        
  GAP (type-3) length unknown                  
114 CH211-198E12
ctg7204
zC198E12
-
-
BX640548.14
finished
231587 CHORI-211        
  GAP (type-3) length unknown                  
116 DKEY-231O6
ctg7204_1
zK231O6
-
-
CU302307.5
finished
178447 DanioKey        
  GAP (type-3) length unknown                  
118 CH211-258B5
ctg2
zC258B5
-
-
LO017645.1
contiguous
153138 CHORI-211        
  GAP (type-3) length unknown                  
120 CH211-11G6
ctg85
zC11G6
-
-
CT033846.15
finished
172041 CHORI-211        
  GAP (type-3) length unknown                  
122 ZFOS-965F2
ctg58
zF965F2
-
-
FO834832.1
unfinished
41891 ZFISHFOS        

Statistics

Help

Clone Summary

Number of gaps
49
Gap types
type-3
49
Total clones
73
Clone HTGS Phases
contiguous
1
finished
71
unfinished
1
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
93,513
Total finished length of fin clones w/ overlap
10,906,332
Total finished length of fin clones w/o overlap
10,812,819
Total overlap length of fin+unfin clones
93,513
Total finished length of fin+unfin clones w/ overlap
11,101,361
Total finished length of fin+unfin clones w/o overlap
11,007,848

Dovetails

Help

# rank accession status length date
1 19 BX927242 unfinished 51 Fri, 30 Sep 2016 02:42
2 91 AL929306 unfinished 76,226 Fri, 30 Sep 2016 02:42

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