ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region H_10 (TPF updated: 2014-01-14)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH211-103D22
ctg1000
zC103D22
EPN details
AL732562.8
finished
2 DKEY-30E1
ctg1000
zK30E1
EPN details
CR847960.14
finished
  GAP (type-3) length unknown    
4 CH211-154C10
ctg1001
zC154C10
EPN details
CR762467.7
finished
5 CH211-231O11
ctg1001
zC231O11
EPN details
CR394550.5
finished
6 DKEYP-55D6
ctg1001
zKp55D6
EPN details
CR925788.4
finished
7 CH211-263F9
ctg1001
zC263F9
EPN details
BX323454.3
finished
  GAP (type-3) length unknown    
9 CH211-270M20
ctg1003
zC270M20
EPN details
BX276087.14
finished
  GAP (type-3) length unknown    
11 DKEY-56F11
ctg1004
zK56F11
EPN details
BX088530.6
finished
12 CH211-203M16
ctg1004
zC203M16
EPN details
BX248245.10
finished
  GAP (type-3) length unknown    
14 CH211-252F24
ctg1007
zC252F24
EPN details
BX296525.5
finished
  GAP (type-3) length unknown    
16 CH211-103E2
ctg1018
zC103E2
EPN details
BX005014.5
finished
  GAP (type-3) length unknown    
18 DKEY-63L2
ctg1019
zK63L2
EPN details
CR925778.5
finished
  GAP (type-3) length unknown    
20 CH211-217K23
ctg1022
zC217K23
EPN details
BX784038.11
finished
21 DKEY-45P9
ctg1022
zK45P9
EPN details
BX470223.14
finished
22 CH211-245F1
ctg1022
zC245F1
EPN details
CR394524.8
finished
23 DKEY-160K9
ctg1022
zK160K9
EPN details
CR550301.11
finished
24 CH211-160F13
ctg1022
zC160F13
EPN details
CR626961.6
finished
25 CH211-106H12
ctg1022
zC106H12
EPN details
CR293499.22
finished
26 DKEY-104I9
ctg1022
zK104I9
EPN details
BX323802.24
finished
  GAP (type-3) length unknown    
28 CH211-120G21
ctg1026
zC120G21
EPN details
AL845438.21
finished
  GAP (type-3) length unknown    
30 DKEY-193D18
ctg1027
zK193D18
EPN details
BX571824.7
finished
31 DKEY-147H15
ctg1027
zK147H15
EPN details
BX000353.8
finished
32 CH211-227H20
ctg1027
zC227H20
EPN details
BX537307.6
finished
  GAP (type-3) length unknown    
34 CH211-242B23
ctg1029
zC242B23
EPN details
CR627488.8
finished
35 CH211-167B13
ctg1029
zC167B13
EPN details
CR753900.9
finished
  GAP (type-3) length unknown    
37 CH211-22E9
ctg1037
zC22E9
EPN details
CR925820.5
finished
  GAP (type-3) length unknown    
39 DKEY-96I8
ctg1048
zK96I8
EPN details
BX511234.7
finished
40 CH211-153B4
ctg1048
zC153B4
EPN details
CR932437.5
finished
  GAP (type-3) length unknown    
42 CH211-160L12
ctg1060
zC160L12
EPN details
CR925859.4
finished
43 CH211-132E23
ctg1060
zC132E23
EPN details
BX640592.10
finished
44 DKEY-41J22
ctg1060
zK41J22
EPN details
CR354597.8
finished
45 CH211-129H21
ctg1060
Cl/Pr zC129H21/zK106E8 swap
EPN details
BX324002.8
finished
  GAP (type-3) length unknown    
47 CH211-83M9
ctg1566
zC83M9
EPN details
CR450752.7
finished
48 CH211-237G1
ctg1566
zC237G1
EPN details
AL935281.7
finished
  GAP (type-3) length unknown    
50 CH211-241N16
ctg3060
zC241N16
EPN details
AL935311.10
finished
51 CH211-138M21
ctg3060
zC138M21
EPN details
CR352251.11
finished
52 CH73-95E3
ctg3060
zH95E3
EPN details
CU075737.8
finished
  GAP (type-3) length unknown    
54 DKEY-261C10
ctg6359
zK261C10
EPN details
CU302204.11
finished
  GAP (type-3) length unknown    
56 CH211-266O3
ctg6501
zC266O3
EPN details
BX664626.9
finished
  GAP (type-3) length unknown    
58 CH211-11M22
ctg6516
zC11M22
EPN details
AL845359.15
finished
  GAP (type-3) length unknown    
60 CH211-197O16
ctg6587
zC197O16
EPN details
BX936392.23
finished
  GAP (type-3) length unknown    
62 CH211-197B6
ctg6682
zC197B6
EPN details
AL935324.8
finished
  GAP (type-3) length unknown    
64 DKEY-237O15
ctg6708
zK237O15
EPN details
BX088560.7
finished
65 CH211-146H22
ctg6708
zC146H22
EPN details
BX957312.8
finished
  GAP (type-3) length unknown    
67 CH73-46N19
ctg949
zH46N19
EPN details
CU075722.4
finished
  GAP (type-3) length unknown    
69 RP71-76A6
ctg965
Cl/Pr bZ76A6/bZ98D8 swap
EPN details
AL606972.12
finished
  GAP (type-3) length unknown    
71 CH211-241N11
ctg969
zC241N11
EPN details
BX255956.5
finished
72 CH211-134A17
ctg969
zC134A17
EPN details
BX569780.6
finished
73 CH211-199D3
ctg969
zC199D3
EPN details
BX322666.10
finished
  GAP (type-3) length unknown    
75 DKEY-271O4
ctg970
zK271O4
EPN details
BX548012.11
finished
76 DKEY-275J21
ctg970
zK275J21
EPN details
CR925790.7
finished
  GAP (type-3) length unknown    
78 CH211-117M12
ctg971
zC117M12
EPN details
AL929582.10
finished
79 CH211-67F22
ctg971
zC67F22
EPN details
BX927080.12
finished
80 DKEY-150E17
ctg971
zK150E17
EPN details
BX957321.5
finished
81 CH211-117B1
ctg971
zC117B1
EPN details
CR318633.23
finished
82 CH211-103D18
ctg971
zC103D18
EPN details
CT027728.5
finished
  GAP (type-3) length unknown    
84 CH211-197A16
ctg973
zC197A16
EPN details
BX571802.15
finished
  GAP (type-3) length unknown    
86 DKEYP-66E4
ctg975
zKp66E4
EPN details
CR925824.7
finished
87 DKEY-195N23
ctg975
zK195N23
EPN details
CT027988.7
finished
88 CH211-51N18
ctg975
zC51N18
EPN details
CR589883.15
finished
89 CH211-212C19
ctg975
zC212C19
EPN details
CR555302.7
finished
  GAP (type-3) length unknown    
91 CH211-218E6
ctg979
zC218E6
EPN details
CR339052.6
finished
  GAP (type-3) length unknown    
93 DKEY-6H12
ctg981
zK6H12
EPN details
CR450792.19
finished
94 CH211-87P14
ctg981
zC87P14
EPN details
CT998557.4
unfinished
95 CH211-134G9
ctg981
zC134G9
EPN details
BX957290.7
finished
96 CH211-214F6
ctg981
zC214F6
EPN details
CR854904.9
finished
97 DKEY-72P6
ctg981
zK72P6
EPN details
CR925812.10
finished
  GAP (type-3) length unknown    
99 CH211-212K20
ctg984
zC212K20
EPN details
CR394569.9
finished
100 DKEY-156I4
ctg984
zK156I4
EPN details
CR933101.7
finished
101 DKEY-111D8
ctg984
zK111D8
EPN details
BX005349.6
finished
102 CH211-174A15
ctg984
zC174A15
EPN details
BX005449.4
finished
103 DKEY-88J18
ctg984
zK88J18
EPN details
CR555296.6
finished
104 CH211-10N1
ctg984
zC10N1
EPN details
BX957284.5
finished
105 DKEY-43N16
ctg984
zK43N16
EPN details
BX640477.6
finished
106 DKEY-225G6
ctg984
zK225G6
EPN details
BX539324.15
finished
107 DKEYP-22D7
ctg984
zKp22D7
EPN details
BX649362.6
finished
108 CH211-251M11
ctg984
zC251M11
EPN details
BX294666.6
finished
109 CH211-170A5
ctg984
zC170A5
EPN details
CR628405.8
finished
  GAP (type-3) length unknown    
111 CH73-199E21
ctg987
zH199E21
EPN details
CT027981.5
finished
112 DKEYP-89A8
ctg987
zKp89A8
EPN details
CR925760.12
finished
113 DKEY-16E11
ctg987
zK16E11
EPN details
CR854956.11
finished
  GAP (type-3) length unknown    
115 CH211-130N22
ctg988
zC130N22
EPN details
BX957271.6
finished
  GAP (type-3) length unknown    
117 DKEY-208I5
ctg990
zK208I5
EPN details
CR855995.2
finished
  GAP (type-3) length unknown    
119 DKEY-192A15
ctg992
zK192A15
EPN details
CR854982.12
finished
  GAP (type-3) length unknown    
121 DKEY-3B23
ctg994
zK3B23
EPN details
CR925781.6
finished
  GAP (type-3) length unknown    
123 CH211-145A11
ctg996
Cl/Pr zC145A11/zC250A17 swap
EPN details
BX323039.6
finished
124 DKEY-30L21
ctg996
zK30L21
EPN details
BX323879.11
finished
  GAP (type-3) length unknown    
126 CH211-242F18
ctg1008_H10
zC242F18
EPN details
CR450744.23
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 187365 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 AL732562.8 1 187365 +
187366 402020 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 CR847960.14 2001 216655 +
402021 452020 3 N 50000 contig no
452021 560492 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 6 CR762467.7 1 108472 +
560493 729317 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 6 CR394550.5 2001 170825 +
729318 729540 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 6 CR925788.4 2001 2223 +
729541 734540 7 N 5000 No overlap in database    
734541 860721 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 8 - 8 BX323454.3 1 126181 +
860722 910721 9 N 50000 contig no
910722 1077929 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 10 BX276087.14 1 167208 +
1077930 1127929 11 N 50000 contig no
1127930 1293493 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 13 BX088530.6 1 165564 +
1293494 1369908 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 13 BX248245.10 2001 78415 +
1369909 1419908 14 N 50000 contig no
1419909 1580320 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 15 BX296525.5 1 160412 +
1580321 1630320 16 N 50000 contig no
1630321 1790941 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 17 BX005014.5 1 160621 +
1790942 1840941 18 N 50000 contig no
1840942 2052681 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 19 CR925778.5 1 211740 +
2052682 2102681 20 N 50000 contig no
2102682 2297902 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 BX784038.11 1 195221 +
2297903 2545030 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 BX470223.14 1 247128 -
2545031 2600579 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 CR394524.8 2001 57549 +
2600580 2754592 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 CR550301.11 2001 156013 +
2754593 2823544 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 CR626961.6 1 68952 -
2823545 2873431 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 CR293499.22 60615 110501 +
2873432 2981174 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 BX323802.24 2001 109743 +
2981175 3031174 28 N 50000 contig no
3031175 3206233 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 29 AL845438.21 1 175059 +
3206234 3256233 30 N 50000 contig no
3256234 3316629 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 32 BX571824.7 1 60396 +
3316630 3503669 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 32 BX000353.8 2001 189040 +
3503670 3508669 33 N 5000 No overlap in database    
3508670 3607830 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 34 - 34 BX537307.6 1 99161 +
3607831 3657830 35 N 50000 contig no
3657831 3795263 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 36 - 37 CR627488.8 1 137433 -
3795264 3906994 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 36 - 37 CR753900.9 2001 113731 +
3906995 3956994 38 N 50000 contig no
3956995 4130017 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 39 CR925820.5 1 173023 +
4130018 4180017 40 N 50000 contig no
4180018 4292086 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 42 BX511234.7 1 112069 +
4292087 4341376 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 42 CR932437.5 2001 51290 +
4341377 4391376 43 N 50000 contig no
4391377 4415557 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 45 CR925859.4 1 24181 +
4415558 4599680 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 45 BX640592.10 2001 186123 +
4599681 4604680 46 N 5000 No overlap in database    
4604681 4621954 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 48 CR354597.8 1 17274 +
4621955 4798127 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 48 BX324002.8 1 176173 -
4798128 4848127 49 N 50000 contig no
4848128 4880230 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 51 CR450752.7 1 32103 +
4880231 5028169 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 51 AL935281.7 1 147939 -
5028170 5078169 52 N 50000 contig no
5078170 5240290 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 54 AL935311.10 1 162121 +
5240291 5414137 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 54 CR352251.11 2001 175847 +
5414138 5419137 55 N 5000 No overlap in database    
5419138 5486033 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 56 CU075737.8 1 66896 +
5486034 5536033 57 N 50000 contig no
5536034 5696708 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 58 - 58 CU302204.11 1 160675 +
5696709 5746708 59 N 50000 contig no
5746709 5947676 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 60 BX664626.9 1 200968 +
5947677 5997676 61 N 50000 contig no
5997677 6173608 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 62 - 62 AL845359.15 1 175932 +
6173609 6223608 63 N 50000 contig no
6223609 6404393 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 64 - 64 BX936392.23 1 180785 +
6404394 6454393 65 N 50000 contig no
6454394 6652123 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 66 - 66 AL935324.8 1 197730 +
6652124 6702123 67 N 50000 contig no
6702124 6856610 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 68 - 69 BX088560.7 1 154487 +
6856611 6952679 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 68 - 69 BX957312.8 1 96069 +
6952680 7002679 70 N 50000 contig no
7002680 7007672 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 71 CU075722.4 1 4993 +
7007673 7057672 72 N 50000 contig no
7057673 7141376 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 73 AL606972.12 1 83704 +
7141377 7191376 74 N 50000 contig no
7191377 7371989 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 75 BX255956.5 1 180613 +
7371990 7376989 76 N 5000 No overlap in database    
7376990 7562798 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 BX569780.6 1 185809 +
7562799 7663963 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 BX322666.10 1 101165 +
7663964 7713963 79 N 50000 contig no
7713964 7868520 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 81 BX548012.11 1 154557 +
7868521 8002703 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 81 CR925790.7 2001 136183 +
8002704 8052703 82 N 50000 contig no
8052704 8228280 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 87 AL929582.10 1 175577 -
8228281 8312950 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 87 BX927080.12 2001 86670 +
8312951 8362949 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 87 BX957321.5 2001 51999 +
8362950 8519737 86 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 87 CR318633.23 2001 158788 +
8519738 8565746 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 87 CT027728.5 2001 48009 +
8565747 8615746 88 N 50000 contig no
8615747 8812745 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 89 BX571802.15 1 196999 +
8812746 8862745 90 N 50000 contig no
8862746 9040861 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 94 CR925824.7 1 178116 -
9040862 9041720 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 94 CT027988.7 2001 2859 +
9041721 9193552 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 94 CR589883.15 2001 153832 +
9193553 9394021 94 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 94 CR555302.7 2001 202469 +
9394022 9444021 95 N 50000 contig no
9444022 9571900 96 FClick to retrieve finished assembled sequence in green bar: rank(s) 96 - 96 CR339052.6 1 127879 +
9571901 9621900 97 N 50000 contig no
9621901 9854933 98 FClick to retrieve finished assembled sequence in green bar: rank(s) 98 - 98 CR450792.19 1 233033 +
9854934 9904933 99 N 50000 clone yes
9904934 10069321 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 100 - 100 BX957290.7 1 164388 +
10069322 10074321 101 N 5000 No overlap in database    
10074322 10188475 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 103 CR854904.9 1 114154 +
10188476 10395536 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 103 CR925812.10 1 207061 +
10395537 10445536 104 N 50000 contig no
10445537 10639312 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 108 CR394569.9 1 193776 +
10639313 10650962 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 108 CR933101.7 2001 13650 +
10650963 10752431 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 108 BX005349.6 2001 103469 +
10752432 10892485 108 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 108 BX005449.4 2001 142054 +
10892486 10897485 109 N 5000 No overlap in database    
10897486 11095756 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 110 - 110 CR555296.6 1 198271 +
11095757 11100756 111 N 5000 No overlap in database    
11100757 11161286 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 117 BX957284.5 1 60530 +
11161287 11417334 113 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 117 BX640477.6 2001 258048 +
11417335 11593408 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 117 BX539324.15 2001 178074 +
11593409 11635477 115 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 117 BX649362.6 2001 44069 +
11635478 11818051 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 117 BX294666.6 2001 184574 +
11818052 11891172 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 117 CR628405.8 2001 75121 +
11891173 11941172 118 N 50000 contig no
11941173 11943582 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 119 CT027981.5 1 2410 +
11943583 11948582 120 N 5000 No overlap in database    
11948583 12071246 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 122 CR925760.12 1 122664 +
12071247 12263328 122 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 122 CR854956.11 2001 194082 +
12263329 12313328 123 N 50000 contig no
12313329 12474493 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 124 - 124 BX957271.6 1 161165 +
12474494 12524493 125 N 50000 contig no
12524494 12652393 126 FClick to retrieve finished assembled sequence in green bar: rank(s) 126 - 126 CR855995.2 1 127900 +
12652394 12702393 127 N 50000 contig no
12702394 12860171 128 FClick to retrieve finished assembled sequence in green bar: rank(s) 128 - 128 CR854982.12 1 157778 +
12860172 12910171 129 N 50000 contig no
12910172 13112305 130 FClick to retrieve finished assembled sequence in green bar: rank(s) 130 - 130 CR925781.6 1 202134 +
13112306 13162305 131 N 50000 contig no
13162306 13313077 132 FClick to retrieve finished assembled sequence in green bar: rank(s) 132 - 132 BX323039.6 1 150772 +
13313078 13318077 133 N 5000 No overlap in database    
13318078 13561553 134 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 134 BX323879.11 1 243476 +
13561554 13611553 135 N 50000 contig no
13611554 13765060 136 FClick to retrieve finished assembled sequence in green bar: rank(s) 136 - 136 CR450744.23 1 153507 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH211-103D22
ctg1000
zC103D22
EPN details
Submitted to EMBL
12-JAN-09
AL732562.8
finished
187365 CHORI-211 3' / 5'
187365 / 2001
- / -
2000
0
Identified
2006-03-22
find_overl...
badger
 
2 DKEY-30E1
ctg1000
zK30E1
EPN details
Analysed
17-MAR-06
CR847960.14
finished
216655 DanioKey        
  GAP (type-3) length unknown                  
4 CH211-154C10
ctg1001
zC154C10
EPN details
Analysed
08-JUN-06
CR762467.7
finished
108472 CHORI-211 3' / 5'
108472 / 2001
- / -
2000
0
Identified
2006-06-08
find_overl...
badger
 
5 CH211-231O11
ctg1001
zC231O11
EPN details
Analysed
13-JAN-06
CR394550.5
finished
170825 CHORI-211 3' / 5'
170825 / 2001
- / -
2000
0
Identified
2006-05-20
find_overl...
badger
 
6 DKEYP-55D6
ctg1001
zKp55D6
EPN details
Analysed
20-MAY-06
CR925788.4
finished
2223 DanioKeypilot        
7 CH211-263F9
ctg1001
zC263F9
EPN details
Analysed
11-DEC-03
BX323454.3
finished
126181 CHORI-211        
  GAP (type-3) length unknown                  
9 CH211-270M20
ctg1003
zC270M20
EPN details
Analysed
26-MAR-04
BX276087.14
finished
167208 CHORI-211        
  GAP (type-3) length unknown                  
11 DKEY-56F11
ctg1004
zK56F11
EPN details
Analysed
22-JAN-04
BX088530.6
finished
165564 DanioKey 3' / 5'
165564 / 2001
- / -
2000
0
Identified
2004-01-23
find_overl...
badger
 
12 CH211-203M16
ctg1004
zC203M16
EPN details
Analysed
21-APR-04
BX248245.10
finished
78415 CHORI-211        
  GAP (type-3) length unknown                  
14 CH211-252F24
ctg1007
zC252F24
EPN details
Analysed
18-APR-04
BX296525.5
finished
160412 CHORI-211        
  GAP (type-3) length unknown                  
16 CH211-103E2
ctg1018
zC103E2
EPN details
Analysed
03-OCT-03
BX005014.5
finished
160621 CHORI-211        
  GAP (type-3) length unknown                  
18 DKEY-63L2
ctg1019
zK63L2
EPN details
Analysed
18-MAR-06
CR925778.5
finished
211740 DanioKey        
  GAP (type-3) length unknown                  
20 CH211-217K23
ctg1022
zC217K23
EPN details
Analysed
06-JUN-04
BX784038.11
finished
195221 CHORI-211 3' / 3'
195221 / 247128
- / -
516
0.39
Identified
2010-07-06
find_overl...
humpub
 
21 DKEY-45P9
ctg1022
zK45P9
EPN details
Analysed
29-JAN-04
BX470223.14
finished
247644 DanioKey 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-06-23
find_overl...
badger
 
22 CH211-245F1
ctg1022
zC245F1
EPN details
Analysed
21-JUN-06
CR394524.8
finished
57549 CHORI-211 3' / 5'
57549 / 2001
- / -
2000
0
Identified
2006-07-20
find_overl...
badger
 
23 DKEY-160K9
ctg1022
zK160K9
EPN details
Analysed
19-JUL-06
CR550301.11
finished
156013 DanioKey 3' / 3'
156013 / 68952
- / 23528
74759
0.07
Identified
2006-07-20
find_overl...
badger
 
24 CH211-160F13
ctg1022
zC160F13
EPN details
Analysed
01-MAR-06
CR626961.6
finished
167229 CHORI-211 5' / 5'
1 / 60615
- / -
60618
0.01
Identified
2006-08-10
find_overl...
badger
 
25 CH211-106H12
ctg1022
zC106H12
EPN details
Analysed
13-OCT-05
CR293499.22
finished
110501 CHORI-211 3' / 5'
110501 / 2001
- / -
2000
0
Identified
2005-08-05
find_overl...
badger
 
26 DKEY-104I9
ctg1022
zK104I9
EPN details
Analysed
24-AUG-05
BX323802.24
finished
109743 DanioKey        
  GAP (type-3) length unknown                  
28 CH211-120G21
ctg1026
zC120G21
EPN details
Analysed
02-SEP-03
AL845438.21
finished
175059 CHORI-211        
  GAP (type-3) length unknown                  
30 DKEY-193D18
ctg1027
zK193D18
EPN details
Analysed
15-APR-05
BX571824.7
finished
60396 DanioKey 3' / 5'
60396 / 2001
- / -
2000
0
Identified
2005-03-05
find_overl...
badger
 
31 DKEY-147H15
ctg1027
zK147H15
EPN details
Analysed
26-JUN-03
BX000353.8
finished
189040 DanioKey        
32 CH211-227H20
ctg1027
zC227H20
EPN details
Analysed
17-NOV-04
BX537307.6
finished
99161 CHORI-211        
  GAP (type-3) length unknown                  
34 CH211-242B23
ctg1029
zC242B23
EPN details
Analysed
02-MAR-06
CR627488.8
finished
137433 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
35 CH211-167B13
ctg1029
zC167B13
EPN details
Analysed
03-MAR-06
CR753900.9
finished
113731 CHORI-211        
  GAP (type-3) length unknown                  
37 CH211-22E9
ctg1037
zC22E9
EPN details
Analysed
23-MAR-06
CR925820.5
finished
173023 CHORI-211        
  GAP (type-3) length unknown                  
39 DKEY-96I8
ctg1048
zK96I8
EPN details
Analysed
19-APR-06
BX511234.7
finished
112069 DanioKey 3' / 5'
112069 / 2001
- / -
2000
0
Identified
2006-07-06
find_overl...
badger
 
40 CH211-153B4
ctg1048
zC153B4
EPN details
Analysed
04-JUL-06
CR932437.5
finished
51290 CHORI-211        
  GAP (type-3) length unknown                  
42 CH211-160L12
ctg1060
zC160L12
EPN details
Analysed
23-FEB-06
CR925859.4
finished
24181 CHORI-211 3' / 5'
24181 / 2001
- / -
2000
0
Identified
2006-03-10
find_overl...
badger
 
43 CH211-132E23
ctg1060
zC132E23
EPN details
Analysed
17-MAR-04
BX640592.10
finished
186123 CHORI-211        
44 DKEY-41J22
ctg1060
zK41J22
EPN details
Analysed
28-MAR-06
CR354597.8
finished
17274 DanioKey 3' / 3'
17274 / 176173
- / -
2000
0
Identified
2006-03-31
find_overl...
badger
 
45 CH211-129H21
ctg1060
Cl/Pr zC129H21/zK106E8 swap
EPN details
Analysed
27-MAR-04
BX324002.8
finished
178173 CHORI-211        
  GAP (type-3) length unknown                  
47 CH211-83M9
ctg1566
zC83M9
EPN details
Analysed
07-FEB-06
CR450752.7
finished
32103 CHORI-211 3' / 3'
32103 / 147939
- / -
2000
0
Identified
2006-03-09
find_overl...
badger
 
48 CH211-237G1
ctg1566
zC237G1
EPN details
Analysed
01-AUG-03
AL935281.7
finished
149939 CHORI-211        
  GAP (type-3) length unknown                  
50 CH211-241N16
ctg3060
zC241N16
EPN details
Analysed
05-SEP-03
AL935311.10
finished
162121 CHORI-211 3' / 5'
162121 / 2001
- / -
2000
0
Identified
2005-10-06
find_overl...
badger
 
51 CH211-138M21
ctg3060
zC138M21
EPN details
Analysed
20-MAY-06
CR352251.11
finished
175847 CHORI-211        
52 CH73-95E3
ctg3060
zH95E3
EPN details
Analysed
06-DEC-06
CU075737.8
finished
66896 CHORI-73        
  GAP (type-3) length unknown                  
54 DKEY-261C10
ctg6359
zK261C10
EPN details
Analysed
29-NOV-07
CU302204.11
finished
160675 DanioKey        
  GAP (type-3) length unknown                  
56 CH211-266O3
ctg6501
zC266O3
EPN details
Analysed
15-JUN-04
BX664626.9
finished
200968 CHORI-211        
  GAP (type-3) length unknown                  
58 CH211-11M22
ctg6516
zC11M22
EPN details
Analysed
20-MAY-03
AL845359.15
finished
175932 CHORI-211        
  GAP (type-3) length unknown                  
60 CH211-197O16
ctg6587
zC197O16
EPN details
Analysed
05-JUL-06
BX936392.23
finished
180785 CHORI-211        
  GAP (type-3) length unknown                  
62 CH211-197B6
ctg6682
zC197B6
EPN details
Analysed
12-AUG-03
AL935324.8
finished
197730 CHORI-211        
  GAP (type-3) length unknown                  
64 DKEY-237O15
ctg6708
zK237O15
EPN details
Submitted to EMBL
12-JAN-09
BX088560.7
finished
156486 DanioKey 3' / 5'
154487 / 1
- / -
2000
0.05
Identified
2005-03-25
find_overl...
badger
 
65 CH211-146H22
ctg6708
zC146H22
EPN details
Analysed
02-APR-05
BX957312.8
finished
96069 CHORI-211        
  GAP (type-3) length unknown                  
67 CH73-46N19
ctg949
zH46N19
EPN details
Analysed
07-FEB-07
CU075722.4
finished
4993 CHORI-73        
  GAP (type-3) length unknown                  
69 RP71-76A6
ctg965
Cl/Pr bZ76A6/bZ98D8 swap
EPN details
Analysed
14-SEP-02
AL606972.12
finished
83704 RPCI-71        
  GAP (type-3) length unknown                  
71 CH211-241N11
ctg969
zC241N11
EPN details
Analysed
20-FEB-04
BX255956.5
finished
180613 CHORI-211        
72 CH211-134A17
ctg969
zC134A17
EPN details
Analysed
08-JAN-04
BX569780.6
finished
187807 CHORI-211 3' / 5'
185809 / 1
- / -
2000
0.1
Commented
2005-02-22
edit_overl...
sb7
 
73 CH211-199D3
ctg969
zC199D3
EPN details
Analysed
02-APR-04
BX322666.10
finished
101165 CHORI-211        
  GAP (type-3) length unknown                  
75 DKEY-271O4
ctg970
zK271O4
EPN details
Analysed
27-MAR-04
BX548012.11
finished
154557 DanioKey 3' / 5'
154557 / 2001
- / -
2000
0
Identified
2007-07-11
find_overl...
gjc
 
76 DKEY-275J21
ctg970
zK275J21
EPN details
Analysed
07-JUL-07
CR925790.7
finished
136183 DanioKey        
  GAP (type-3) length unknown                  
78 CH211-117M12
ctg971
zC117M12
EPN details
Analysed
13-SEP-03
AL929582.10
finished
175577 CHORI-211 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-04-22
find_overl...
badger
 
79 CH211-67F22
ctg971
zC67F22
EPN details
Analysed
22-APR-06
BX927080.12
finished
86670 CHORI-211 3' / 5'
86670 / 2001
- / -
2000
0
Identified
2006-06-08
find_overl...
badger
 
80 DKEY-150E17
ctg971
zK150E17
EPN details
Analysed
08-JUN-06
BX957321.5
finished
51999 DanioKey 3' / 5'
51999 / 2001
- / -
2000
0
Identified
2006-06-08
find_overl...
badger
 
81 CH211-117B1
ctg971
zC117B1
EPN details
Analysed
02-SEP-05
CR318633.23
finished
158788 CHORI-211 3' / 5'
158788 / 2001
- / -
2000
0
Identified
2006-06-29
find_overl...
badger
 
82 CH211-103D18
ctg971
zC103D18
EPN details
Analysed
28-JUN-06
CT027728.5
finished
48009 CHORI-211        
  GAP (type-3) length unknown                  
84 CH211-197A16
ctg973
zC197A16
EPN details
Analysed
27-SEP-05
BX571802.15
finished
196999 CHORI-211        
  GAP (type-3) length unknown                  
86 DKEYP-66E4
ctg975
zKp66E4
EPN details
Analysed
29-APR-06
CR925824.7
finished
178116 DanioKeypilot 5' / 5'
1 / 2001
- / -
2000
0
Identified
2006-07-06
find_overl...
badger
 
87 DKEY-195N23
ctg975
zK195N23
EPN details
Analysed
05-JUL-06
CT027988.7
finished
2859 DanioKey 3' / 5'
2859 / 2001
- / -
2000
0
Identified
2006-07-06
find_overl...
badger
 
88 CH211-51N18
ctg975
zC51N18
EPN details
Analysed
31-MAY-06
CR589883.15
finished
153832 CHORI-211 3' / 5'
153832 / 2001
- / -
2000
0
Identified
2006-06-01
find_overl...
badger
 
89 CH211-212C19
ctg975
zC212C19
EPN details
Analysed
01-MAR-06
CR555302.7
finished
202469 CHORI-211        
  GAP (type-3) length unknown                  
91 CH211-218E6
ctg979
zC218E6
EPN details
Analysed
29-OCT-05
CR339052.6
finished
127879 CHORI-211        
  GAP (type-3) length unknown                  
93 DKEY-6H12
ctg981
zK6H12
EPN details
Analysed
01-SEP-06
CR450792.19
finished
233033 DanioKey        
94 CH211-87P14
ctg981
zC87P14
EPN details
Cancelled
12-JUL-11
CT998557.4
unfinished
195690 CHORI-211 5' / 3'
31584 / 164388
12547 / -
19070
0.32
Identified
2006-07-20
find_overl...
badger
 
95 CH211-134G9
ctg981
zC134G9
EPN details
Analysed
06-APR-05
BX957290.7
finished
164388 CHORI-211        
96 CH211-214F6
ctg981
zC214F6
EPN details
Analysed
28-APR-06
CR854904.9
finished
116150 CHORI-211 3' / 5'
114154 / 1
- / -
2000
0.2
Identified
2006-08-17
find_overl...
badger
 
97 DKEY-72P6
ctg981
zK72P6
EPN details
Analysed
17-AUG-06
CR925812.10
finished
207061 DanioKey        
  GAP (type-3) length unknown                  
99 CH211-212K20
ctg984
zC212K20
EPN details
Analysed
30-NOV-05
CR394569.9
finished
193776 CHORI-211 3' / 5'
193776 / 2001
- / -
2000
0
Identified
2006-03-10
find_overl...
badger
 
100 DKEY-156I4
ctg984
zK156I4
EPN details
Analysed
28-FEB-06
CR933101.7
finished
13650 DanioKey 3' / 5'
13650 / 2001
- / -
2000
0
Identified
2006-03-10
find_overl...
badger
 
101 DKEY-111D8
ctg984
zK111D8
EPN details
Analysed
08-JAN-04
BX005349.6
finished
103469 DanioKey 3' / 5'
103469 / 2001
- / -
2000
0
Identified
2003-11-28
find_overl...
badger
 
102 CH211-174A15
ctg984
zC174A15
EPN details
Analysed
25-DEC-03
BX005449.4
finished
142054 CHORI-211        
103 DKEY-88J18
ctg984
zK88J18
EPN details
Analysed
21-FEB-06
CR555296.6
finished
198271 DanioKey        
104 CH211-10N1
ctg984
zC10N1
EPN details
Analysed
15-APR-05
BX957284.5
finished
60530 CHORI-211 3' / 5'
60530 / 2001
- / -
2000
0
Identified
2005-02-11
find_overl...
badger
 
105 DKEY-43N16
ctg984
zK43N16
EPN details
Analysed
01-SEP-04
BX640477.6
finished
258048 DanioKey 3' / 5'
258048 / 2001
- / -
2000
0
Identified
2004-08-20
find_overl...
badger
 
106 DKEY-225G6
ctg984
zK225G6
EPN details
Analysed
19-MAY-04
BX539324.15
finished
178074 DanioKey 3' / 5'
178074 / 2001
- / -
2000
0
Identified
2005-01-15
find_overl...
badger
 
107 DKEYP-22D7
ctg984
zKp22D7
EPN details
Analysed
12-JAN-05
BX649362.6
finished
44069 DanioKeypilot 3' / 5'
44069 / 2001
- / -
2000
0
Identified
2005-01-15
find_overl...
badger
 
108 CH211-251M11
ctg984
zC251M11
EPN details
Analysed
06-DEC-03
BX294666.6
finished
184574 CHORI-211 3' / 5'
184574 / 2001
- / -
2000
0
Identified
2006-05-04
find_overl...
badger
 
109 CH211-170A5
ctg984
zC170A5
EPN details
Analysed
04-MAY-06
CR628405.8
finished
75121 CHORI-211        
  GAP (type-3) length unknown                  
111 CH73-199E21
ctg987
zH199E21
EPN details
Analysed
21-JUN-06
CT027981.5
finished
2410 CHORI-73        
112 DKEYP-89A8
ctg987
zKp89A8
EPN details
Analysed
31-MAR-06
CR925760.12
finished
122664 DanioKeypilot 3' / 5'
122664 / 2001
- / -
2000
0
Identified
2006-06-10
find_overl...
badger
 
113 DKEY-16E11
ctg987
zK16E11
EPN details
Analysed
27-FEB-09
CR854956.11
finished
194082 DanioKey        
  GAP (type-3) length unknown                  
115 CH211-130N22
ctg988
zC130N22
EPN details
Analysed
03-MAR-06
BX957271.6
finished
161165 CHORI-211        
  GAP (type-3) length unknown                  
117 DKEY-208I5
ctg990
zK208I5
EPN details
Analysed
27-MAY-06
CR855995.2
finished
127900 DanioKey        
  GAP (type-3) length unknown                  
119 DKEY-192A15
ctg992
zK192A15
EPN details
Analysed
25-AUG-06
CR854982.12
finished
157778 DanioKey        
  GAP (type-3) length unknown                  
121 DKEY-3B23
ctg994
zK3B23
EPN details
Analysed
05-MAY-06
CR925781.6
finished
202134 DanioKey        
  GAP (type-3) length unknown                  
123 CH211-145A11
ctg996
Cl/Pr zC145A11/zC250A17 swap
EPN details
Analysed
20-MAR-04
BX323039.6
finished
150772 CHORI-211        
124 DKEY-30L21
ctg996
zK30L21
EPN details
Analysed
24-NOV-05
BX323879.11
finished
243476 DanioKey        
  GAP (type-3) length unknown                  
126 CH211-242F18
ctg1008_H10
zC242F18
EPN details
Analysed
25-NOV-06
CR450744.23
finished
153507 CHORI-211        

Statistics

Clone Summary

Number of gaps
38
Gap types
type-3
38
Total clones
88
Clone HTGS Phases
finished
87
unfinished
1
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
203,893
Total finished length of fin clones w/ overlap
11,992,460
Total finished length of fin clones w/o overlap
11,788,567
Total overlap length of fin+unfin clones
222,963
Total finished length of fin+unfin clones w/ overlap
12,188,150
Total finished length of fin+unfin clones w/o overlap
11,965,187

Dovetails

# rank accession status length date
1 24 CR626961.6 unfinished 23,528 Wed, 26 Nov 2014 01:40
2 94 CT998557.4 unfinished 12,547 Wed, 26 Nov 2014 01:40

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Other links

* quick link - http://q.sanger.ac.uk/uj7zngaa