ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region H_6 (TPF updated: 2015-02-12)

TPF

Help

# Clone ext/Contig Clone int Acc/Fin
1 CH1073-154P19
ctg10276
zFD154P19
CU550728.5
finished
  GAP (type-3) length unknown    
3 CH73-11M7
ctg10621
zH11M7
FP102274.5
finished
  GAP (type-3) length unknown    
5 DKEY-31O13
ctg1819
zK31O13
AL928622.9
finished
6 DKEY-255P24
ctg1819
zK255P24
CR407556.7
finished
7 DKEY-247F18
ctg1819
zK247F18
BX908749.6
finished
8 DKEY-254A16
ctg1819
zK254A16
CR788244.9
finished
9 DKEY-28K21
ctg1819
zK28K21
BX908723.12
finished
  GAP (type-3) length unknown    
11 CH211-128D23
ctg249
zC128D23
AL929124.13
finished
  GAP (type-3) length unknown    
13 DKEY-219G5
ctg2677
zK219G5
BX950174.16
finished
  GAP (type-3) length unknown    
15 CH211-244C20
ctg2681
zC244C20
CR376772.5
finished
  GAP (type-3) length unknown    
17 CH211-139K23
ctg2716
zC139K23
AL772339.5
finished
  GAP (type-3) length unknown    
19 DKEY-185M11
ctg2718
zK185M11
BX324125.5
finished
  GAP (type-3) length unknown    
21 CH211-207G4
ctg3041
zC207G4
AL773598.5
finished
  GAP (type-3) length unknown    
23 CH211-2A23
ctg3214
zC2A23
AL844196.6
finished
  GAP (type-3) length unknown    
25 DKEY-217C5
ctg3308
zK217C5
CT583707.6
finished
  GAP (type-3) length unknown    
27 CH211-157E20
ctg4516
zC157E20
BX510348.6
finished
  GAP (type-3) length unknown    
29 DKEYP-30B3
ctg5000
zKp30B3
CR847938.10
finished
  GAP (type-3) length unknown    
31 DKEY-186I17
ctg532
zK186I17
CR405684.8
finished
32 CH73-183E2
ctg532
zH183E2
CU928224.8
finished
  GAP (type-3) length unknown    
34 DKEY-270G12
ctg536
zK270G12
CR628393.11
finished
  GAP (type-3) length unknown    
36 CH73-215B15
ctg537
zH215B15
CU041389.8
finished
  GAP (type-3) length unknown    
38 DKEYP-38A10
ctg556
zKp38A10
CR788302.6
finished
39 CH73-6G23
ctg556
zH6G23
CU407320.10
finished
  GAP (type-3) length unknown    
41 DKEYP-113C4
ctg561
zKp113C4
CT573398.8
finished
42 CH211-127A10
ctg561
zC127A10
CT033795.6
finished
43 DKEY-9A8
ctg561
zK9A8
BX005436.12
finished
  GAP (type-3) length unknown    
45 CH73-296I13
ctg562
zH296I13
CT955965.7
finished
  GAP (type-3) length unknown    
47 CH1073-61D15
ctg564
zFD61D15
CU929353.4
finished
  GAP (type-3) length unknown    
49 CH73-362F15
ctg585
zH362F15
CT033801.8
finished
  GAP (type-3) length unknown    
51 CH211-276C22
ctg586
zC276C22
BX571677.10
finished
52 CH211-194J9
ctg586
zC194J9
BX640587.7
finished
53 DKEY-110L7
ctg586
zK110L7
BX640588.5
finished
  GAP (type-3) length unknown    
55 CH211-261F19
ctg591
zC261F19
CR377214.13
finished
  GAP (type-3) length unknown    
57 DKEY-3N4
ctg598
zK3N4
BX004984.6
finished
58 CH211-128M9
ctg598
zC128M9
CR354396.6
finished
  GAP (type-3) length unknown    
60 CH211-87C14
ctg6019
zC87C14
CR388089.8
finished
  GAP (type-3) length unknown    
62 CH211-157H15
ctg6037
zC157H15
CR450743.3
finished
63 CH211-120K2
ctg6037
zC120K2
BX649550.6
finished
  GAP (type-3) length unknown    
65 DKEY-1G17
ctg6041
zK1G17
AL954867.12
finished
66 CH211-147N1
ctg6041
zC147N1
AL954836.13
finished
  GAP (type-3) length unknown    
68 DKEY-20D1
ctg6054
zK20D1
BX548019.36
finished
  GAP (type-3) length unknown    
70 DKEY-203E20
ctg6058
zK203E20
CR388012.7
finished
71 CH73-243A10
ctg6058
zH243A10
CT033835.6
finished
  GAP (type-3) length unknown    
73 CH211-208D14
ctg606
zC208D14
BX119907.8
finished
74 DKEY-29E5
ctg606
zK29E5
AL928555.8
finished
  GAP (type-3) length unknown    
76 CH211-243O12
ctg6098
zC243O12
BX890556.7
finished
77 DKEY-235F19
ctg6098
zK235F19
BX005307.12
finished
78 CH211-203N19
ctg6098
zC203N19
BX950169.13
finished
  GAP (type-3) length unknown    
80 DKEYP-110B6
ctg6102
zKp110B6
BX890550.10
finished
  GAP (type-3) length unknown    
82 DKEY-38N6
ctg6119
zK38N6
BX323816.6
finished
83 DKEY-23I2
ctg6119
zK23I2
BX927354.14
finished
84 CH211-144C15
ctg6119
zC144C15
BX470134.5
finished
85 CH211-248I12
ctg6119
zC248I12
AL929458.7
finished
86 CH211-190B21
ctg6119
zC190B21
AL929200.8
finished
87 DKEYP-59A2
ctg6119
zKp59A2
AL928872.7
finished
  GAP (type-3) length unknown    
89 CH211-144F18
ctg6120
zC144F18
AL732628.18
finished
  GAP (type-3) length unknown    
91 DKEY-50O12
ctg6149
zK50O12
BX936445.8
finished
92 DKEY-16H19
ctg6149
zK16H19
BX936436.13
finished
93 CH211-87G21
ctg6149
zC87G21
BX005300.5
finished
94 CH211-240D20
ctg6149
zC240D20
BX001025.23
finished
  GAP (type-3) length unknown    
96 DKEY-118F12
ctg6151
zK118F12
CT573352.3
unfinished
  GAP (type-3) length unknown    
98 CH211-120O1
ctg6161
zC120O1
BX005145.8
finished
  GAP (type-3) length unknown    
100 DKEY-1N18
ctg6190
zK1N18
BX276106.6
finished
  GAP (type-3) length unknown    
102 CH211-148N10
ctg6197
zC148N10
BX649626.14
finished
  GAP (type-3) length unknown    
104 CH211-205N20
ctg6211
zC205N20
BX088591.11
finished
105 CH73-352G6
ctg6211
zH352G6
CT033815.3
finished
  GAP (type-3) length unknown    
107 CH211-167M4
ctg6212
zC167M4
BX004989.8
finished
  GAP (type-3) length unknown    
109 DKEY-152H20
ctg6216
zK152H20
BX936395.9
finished
110 CH211-204K19
ctg6216
zC204K19
BX571982.6
finished
  GAP (type-3) length unknown    
112 CH211-208B16
ctg6232
zC208B16
BX004819.11
finished
  GAP (type-3) length unknown    
114 DKEY-238I7
ctg6251
zK238I7
BX072568.5
finished
115 DKEY-15L7
ctg6251
zK15L7
BX293997.14
finished
116 CH211-194A23
ctg6251
zC194A23
CR391980.17
finished
117 CH211-286N19
ctg6251
zC286N19
CR936976.15
finished
  GAP (type-3) length unknown    
119 CH211-244I2
ctg6256
zC244I2
BX088541.17
finished
  GAP (type-3) length unknown    
121 CH211-222N24
ctg626
zC222N24
AL807381.6
finished
122 DKEY-49J14
ctg626
zK49J14
BX323580.6
finished
123 DKEY-28P22
ctg626
zK28P22
AL953891.10
finished
124 CH211-198K18
ctg626
zC198K18
CR354598.7
finished
  GAP (type-3) length unknown    
126 CH211-213C6
ctg6261
zC213C6
AL953852.6
finished
  GAP (type-3) length unknown    
128 DKEY-76A17
ctg6267
zK76A17
AL831730.18
finished
  GAP (type-3) length unknown    
130 DKEY-45J13
ctg6275
zK45J13
BX005311.8
finished
131 DKEY-29O15
ctg6275
zK29O15
BX004829.12
finished
  GAP (type-3) length unknown    
133 DKEY-210O7
ctg6285
zK210O7
BX571728.14
finished
134 DKEYP-97G3
ctg6285
zKp97G3
BX663498.9
finished
135 DKEY-31C18
ctg6285
zK31C18
BX664602.11
finished
136 DKEYP-55D11
ctg6285
zKp55D11
BX664627.16
finished
137 DKEY-30P18
ctg6285
zK30P18
BX663607.13
finished
138 DKEY-68K17
ctg6285
zK68K17
BX950863.8
finished
  GAP (type-3) length unknown    
140 DKEY-181I1
ctg6294
zK181I1
CU457793.10
finished
  GAP (type-3) length unknown    
142 DKEY-197A14
ctg6313
zK197A14
CU137682.11
finished
  GAP (type-3) length unknown    
144 CH211-288L20
ctg6332
zC288L20
BX470168.7
finished
  GAP (type-3) length unknown    
146 DKEY-50G15
ctg6341
zK50G15
AL954812.14
finished
  GAP (type-3) length unknown    
148 CH211-12C22
ctg6395
zC12C22
BX957269.5
finished
  GAP (type-3) length unknown    
150 DKEY-20D16
ctg6399
zK20D16
CR354428.16
finished
  GAP (type-3) length unknown    
152 CH211-284K16
ctg6409
zC284K16
CR855378.6
finished
  GAP (type-3) length unknown    
154 DKEY-183M22
ctg6414
zK183M22
CR381602.30
finished
  GAP (type-3) length unknown    
156 DKEYP-15B2
ctg6433
zKp15B2
BX569794.8
finished
157 DKEY-63E5
ctg6433
zK63E5
BX088566.6
finished
158 CH211-239F5
ctg6433
zC239F5
BX119971.8
finished
  GAP (type-3) length unknown    
160 DKEYP-87A2
ctg6443
zKp87A2
CR376789.4
finished
  GAP (type-3) length unknown    
162 CH211-117G3
ctg6448
zC117G3
BX530021.7
finished
  GAP (type-3) length unknown    
164 CH211-260N19
ctg6451
zC260N19
AL808141.8
finished
165 DKEY-201M8
ctg6451
zK201M8
BX571697.3
finished
166 DKEYP-77B12
ctg6451
zKp77B12
BX546445.7
finished
167 CH211-258N9
ctg6451
zC258N9
CT573327.6
finished
  GAP (type-3) length unknown    
169 CH211-244N12
ctg6568
zC244N12
BX294368.7
finished
  GAP (type-3) length unknown    
171 DKEY-265G1
ctg6570
zK265G1
BX957280.14
finished
  GAP (type-3) length unknown    
173 DKEY-204E20
ctg6582
zK204E20
CR626910.5
finished
  GAP (type-3) length unknown    
175 DKEY-265M3
ctg6590
zK265M3
CR855396.12
finished
176 DKEYP-2F4
ctg6590
zKp2F4
CR847859.13
finished
177 CH211-263J13
ctg6590
zC263J13
BX546475.20
finished
  GAP (type-3) length unknown    
179 CH211-67L13
ctg6592
zC67L13
BX927303.11
finished
180 CH211-154F24
ctg6592
zC154F24
BX510310.14
finished
181 DKEY-38L7
ctg6592
zK38L7
BX255933.7
finished
182 DKEY-90G19
ctg6592
zK90G19
BX510937.6
finished
  GAP (type-3) length unknown    
184 DKEY-111C4
ctg6634
zK111C4
BX901950.7
finished
  GAP (type-3) length unknown    
186 CH211-48E20
ctg6638
zC48E20
CT027745.11
finished
  GAP (type-2) length unknown    
188 CH211-30B2
ctg22
zC30B2
CT030225.14
finished
  GAP (type-3) length unknown    
190 DKEY-63M7
ctg6668
zK63M7
AL928556.7
finished
  GAP (type-3) length unknown    
192 DKEY-240N8
ctg6669
zK240N8
BX005335.9
finished
  GAP (type-3) length unknown    
194 RP71-87M8
ctg6670
bZ87M8
BX571897.12
finished
  GAP (type-3) length unknown    
196 DKEY-166L1
ctg6780
zK166L1
CR589950.13
finished
  GAP (type-3) length unknown    
198 CH211-121I12
ctg6789
zC121I12
AL935182.13
finished
  GAP (type-3) length unknown    
200 CH211-51B23
ctg7185
zC51B23
BX004808.5
finished
  GAP (type-3) length unknown    
202 DKEY-209E17
ctg7211
zK209E17
BX005413.7
finished
203 DKEY-242N19
ctg7211
zK242N19
BX005371.20
finished
  GAP (type-3) length unknown    
205 DKEY-197I8
ctg792
zK197I8
CR388181.8
finished
206 CH211-107M8
ctg792
zC107M8
CR407558.22
finished
  GAP (type-3) length unknown    
208 DKEY-170J7
ctg793
zK170J7
CU457790.6
finished
  GAP (type-3) length unknown    
210 ZFOS-1892D8
ctg794
zF1892D8
FP103000.4
finished
  GAP (type-3) length unknown    
212 CH211-188N23
ctg795
zC188N23
BX005055.5
finished
  GAP (type-3) length unknown    
214 DKEY-164L15
ctg796
zK164L15
CR931800.13
finished
  GAP (type-3) length unknown    
216 DKEY-18A23
ctg797
zK18A23
BX004839.9
finished
  GAP (type-3) length unknown    
218 CH1073-342H21
ctg798
zFD342H21
CU693496.6
finished
  GAP (type-3) length unknown    
220 CH211-119L15
ctg799
zC119L15
BX928741.7
finished
  GAP (type-3) length unknown    
222 ZFOS-1157A7
ctg70
zF1157A7
CU694303.14
finished
  GAP (type-3) length unknown    
224 DKEY-78N12
ctg83
zK78N12
CR388371.8
finished
  GAP (type-3) length unknown    
226 DKEY-87O9
ctg46
zK87O9

-
  GAP (type-3) length unknown    
228 CH73-294H9
ctg100
zH294H9

-
  GAP (type-3) length unknown    
230 CH73-28O5
ctg113
zH28O5
CU462981.5
finished
  GAP (type-3) length unknown    
232 ZFOS-2506A4
ctg114
zF2506A4
FP017169.6
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 35743 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 CU550728.5 1 35743 +
35744 85743 2 N 50000 contig no
85744 141207 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 FP102274.5 1 55464 +
141208 191207 4 N 50000 contig no
191208 419764 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 6 AL928622.9 2001 230557 -
419765 450488 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 6 CR407556.7 1 30724 -
450489 455488 7 N 5000 No overlap in database    
455489 641502 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 8 - 8 BX908749.6 1 186014 +
641503 646502 9 N 5000 No overlap in database    
646503 854627 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 11 CR788244.9 1 208125 +
854628 908708 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 11 BX908723.12 24202 78282 +
908709 958708 12 N 50000 contig no
958709 1123951 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 13 AL929124.13 1 165243 +
1123952 1173951 14 N 50000 contig no
1173952 1344229 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 15 BX950174.16 1 170278 +
1344230 1394229 16 N 50000 contig no
1394230 1560058 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 17 CR376772.5 1 165829 +
1560059 1610058 18 N 50000 contig no
1610059 1776867 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 19 AL772339.5 1 166809 +
1776868 1826867 20 N 50000 contig no
1826868 2023392 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 21 BX324125.5 1 196525 +
2023393 2073392 22 N 50000 contig no
2073393 2283267 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 23 AL773598.5 1 209875 +
2283268 2333267 24 N 50000 contig no
2333268 2504408 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 25 AL844196.6 1 171141 +
2504409 2554408 26 N 50000 contig no
2554409 2702246 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 27 - 27 CT583707.6 1 147838 +
2702247 2752246 28 N 50000 contig no
2752247 2921521 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 29 BX510348.6 1 169275 +
2921522 2971521 30 N 50000 contig no
2971522 3140778 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 31 CR847938.10 1 169257 +
3140779 3190778 32 N 50000 contig no
3190779 3231447 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 33 CR405684.8 1 40669 +
3231448 3236447 34 N 5000 No overlap in database    
3236448 3334699 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 35 CU928224.8 1 98252 +
3334700 3384699 36 N 50000 contig no
3384700 3477315 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 37 CR628393.11 1 92616 +
3477316 3527315 38 N 50000 contig no
3527316 3634193 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 39 CU041389.8 1 106878 +
3634194 3684193 40 N 50000 contig no
3684194 3856971 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 42 CR788302.6 1 172778 -
3856972 3911883 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 42 CU407320.10 2001 56912 +
3911884 3961883 43 N 50000 contig no
3961884 4096094 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 44 CT573398.8 1 134211 +
4096095 4101094 45 N 5000 No overlap in database    
4101095 4106711 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 47 CT033795.6 1 5617 +
4106712 4273260 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 47 BX005436.12 1 166549 -
4273261 4323260 48 N 50000 contig no
4323261 4364145 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 49 CT955965.7 1 40885 +
4364146 4414145 50 N 50000 contig no
4414146 4434786 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 51 CU929353.4 1 20641 +
4434787 4484786 52 N 50000 contig no
4484787 4515031 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 53 CT033801.8 1 30245 +
4515032 4565031 54 N 50000 contig no
4565032 4647049 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 57 BX571677.10 1 82018 +
4647050 4837792 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 57 BX640587.7 1 190743 -
4837793 4953298 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 57 BX640588.5 2001 117506 +
4953299 5003298 58 N 50000 contig no
5003299 5184933 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 59 CR377214.13 1 181635 +
5184934 5234933 60 N 50000 contig no
5234934 5499671 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 62 BX004984.6 1 264738 -
5499672 5536615 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 62 CR354396.6 2001 38944 +
5536616 5586615 63 N 50000 contig no
5586616 5752423 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 64 - 64 CR388089.8 1 165808 +
5752424 5802423 65 N 50000 contig no
5802424 5914718 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 66 - 67 CR450743.3 1 112295 +
5914719 6083190 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 66 - 67 BX649550.6 2001 170472 +
6083191 6133190 68 N 50000 contig no
6133191 6355977 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 70 AL954867.12 1 222787 -
6355978 6463268 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 70 AL954836.13 2001 109291 +
6463269 6513268 71 N 50000 contig no
6513269 6716116 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 72 - 72 BX548019.36 1 202848 +
6716117 6766116 73 N 50000 contig no
6766117 6842181 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 74 CR388012.7 1 76065 +
6842182 6847181 75 N 5000 No overlap in database    
6847182 6871885 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 76 - 76 CT033835.6 1 24704 +
6871886 6921885 77 N 50000 contig no
6921886 7102945 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 78 - 79 BX119907.8 1 181060 +
7102946 7290169 79 FClick to retrieve finished assembled sequence in green bar: rank(s) 78 - 79 AL928555.8 1 187224 -
7290170 7340169 80 N 50000 contig no
7340170 7413689 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 83 BX890556.7 1 73520 +
7413690 7588773 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 83 BX005307.12 23379 198462 -
7588774 7743239 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 83 BX950169.13 1 154466 +
7743240 7793239 84 N 50000 contig no
7793240 7967552 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 85 BX890550.10 1 174313 +
7967553 8017552 86 N 50000 contig no
8017553 8208084 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 91 BX323816.6 1 190532 -
8208085 8242498 88 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 91 BX927354.14 2001 36414 +
8242499 8330363 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 91 BX470134.5 2001 89865 -
8330364 8465841 90 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 91 AL929458.7 2001 137478 -
8465842 8586523 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 91 AL929200.8 1 120682 -
8586524 8591523 92 N 5000 No overlap in database    
8591524 8792283 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 93 AL928872.7 1 200760 +
8792284 8842283 94 N 50000 contig no
8842284 9016413 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 95 AL732628.18 1 174130 +
9016414 9066413 96 N 50000 contig no
9066414 9230133 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 98 BX936445.8 1 163720 +
9230134 9428567 98 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 98 BX936436.13 2001 200434 +
9428568 9433567 99 N 5000 No overlap in database    
9433568 9543589 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 100 - 101 BX005300.5 1 110022 -
9543590 9721069 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 100 - 101 BX001025.23 1 177480 -
9721070 9771069 102 N 50000 contig no
9771070 9821069 103 N 50000 clone no
9821070 9871069 104 N 50000 contig no
9871070 10052125 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 105 BX005145.8 1 181056 +
10052126 10102125 106 N 50000 contig no
10102126 10322796 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 107 - 107 BX276106.6 1 220671 +
10322797 10372796 108 N 50000 contig no
10372797 10532901 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 109 BX649626.14 1 160105 +
10532902 10582901 110 N 50000 contig no
10582902 10764237 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 111 - 112 BX088591.11 1 181336 -
10764238 10771439 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 111 - 112 CT033815.3 2001 9202 +
10771440 10821439 113 N 50000 contig no
10821440 10994407 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 114 - 114 BX004989.8 1 172968 +
10994408 11044407 115 N 50000 contig no
11044408 11178173 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 116 - 117 BX936395.9 1 133766 +
11178174 11338193 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 116 - 117 BX571982.6 2001 162020 +
11338194 11388193 118 N 50000 contig no
11388194 11623057 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 119 BX004819.11 1 234864 +
11623058 11673057 120 N 50000 contig no
11673058 11821379 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 121 BX072568.5 1 148322 +
11821380 11826379 122 N 5000 No overlap in database    
11826380 12058038 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 125 BX293997.14 1 231659 +
12058039 12147785 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 125 CR391980.17 1 89747 +
12147786 12302673 125 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 125 CR936976.15 1 154888 +
12302674 12352673 126 N 50000 contig no
12352674 12467566 127 FClick to retrieve finished assembled sequence in green bar: rank(s) 127 - 127 BX088541.17 1 114893 +
12467567 12517566 128 N 50000 contig no
12517567 12691715 129 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 131 AL807381.6 1 174149 +
12691716 12787933 130 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 131 BX323580.6 1950 98167 -
12787934 13030177 131 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 131 AL953891.10 39 242282 +
13030178 13035177 132 N 5000 No overlap in database    
13035178 13225614 133 FClick to retrieve finished assembled sequence in green bar: rank(s) 133 - 133 CR354598.7 1 190437 +
13225615 13275614 134 N 50000 contig no
13275615 13476496 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 135 - 135 AL953852.6 1 200882 +
13476497 13526496 136 N 50000 contig no
13526497 13686322 137 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 137 AL831730.18 1 159826 +
13686323 13736322 138 N 50000 contig no
13736323 13776773 139 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 140 BX005311.8 1 40451 +
13776774 14006354 140 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 140 BX004829.12 2001 231581 +
14006355 14056354 141 N 50000 contig no
14056355 14285413 142 FClick to retrieve finished assembled sequence in green bar: rank(s) 142 - 142 BX571728.14 1 229059 +
14285414 14290413 143 N 5000 No overlap in database    
14290414 14454743 144 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 148 BX663498.9 1 164330 +
14454744 14624241 145 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 148 BX664602.11 2001 171498 +
14624242 14791816 146 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 148 BX664627.16 2001 169575 +
14791817 15007884 147 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 148 BX663607.13 1 216068 +
15007885 15058274 148 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 148 BX950863.8 2001 52390 +
15058275 15108274 149 N 50000 contig no
15108275 15277090 150 FClick to retrieve finished assembled sequence in green bar: rank(s) 150 - 150 CU457793.10 1 168816 +
15277091 15327090 151 N 50000 contig no
15327091 15532480 152 FClick to retrieve finished assembled sequence in green bar: rank(s) 152 - 152 CU137682.11 1 205390 +
15532481 15582480 153 N 50000 contig no
15582481 15731085 154 FClick to retrieve finished assembled sequence in green bar: rank(s) 154 - 154 BX470168.7 1 148605 +
15731086 15781085 155 N 50000 contig no
15781086 15973389 156 FClick to retrieve finished assembled sequence in green bar: rank(s) 156 - 156 AL954812.14 1 192304 +
15973390 16023389 157 N 50000 contig no
16023390 16198203 158 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 158 BX957269.5 1 174814 +
16198204 16248203 159 N 50000 contig no
16248204 16462598 160 FClick to retrieve finished assembled sequence in green bar: rank(s) 160 - 160 CR354428.16 1 214395 +
16462599 16512598 161 N 50000 contig no
16512599 16664171 162 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 162 CR855378.6 1 151573 +
16664172 16714171 163 N 50000 contig no
16714172 16906307 164 FClick to retrieve finished assembled sequence in green bar: rank(s) 164 - 164 CR381602.30 1 192136 +
16906308 16956307 165 N 50000 contig no
16956308 17118695 166 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 BX569794.8 1 162388 +
17118696 17312473 167 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 BX088566.6 1 193778 -
17312474 17369706 168 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 BX119971.8 2002 59234 +
17369707 17419706 169 N 50000 contig no
17419707 17610316 170 FClick to retrieve finished assembled sequence in green bar: rank(s) 170 - 170 CR376789.4 1 190610 +
17610317 17660316 171 N 50000 contig no
17660317 17828524 172 FClick to retrieve finished assembled sequence in green bar: rank(s) 172 - 172 BX530021.7 1 168208 +
17828525 17878524 173 N 50000 contig no
17878525 18025635 174 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 177 AL808141.8 1 147111 +
18025636 18106917 175 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 177 BX571697.3 2001 83282 +
18106918 18182635 176 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 177 BX546445.7 2001 77718 +
18182636 18279606 177 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 177 CT573327.6 2 96972 +
18279607 18329606 178 N 50000 contig no
18329607 18477090 179 FClick to retrieve finished assembled sequence in green bar: rank(s) 179 - 179 BX294368.7 1 147484 +
18477091 18527090 180 N 50000 contig no
18527091 18656537 181 FClick to retrieve finished assembled sequence in green bar: rank(s) 181 - 181 BX957280.14 1 129447 +
18656538 18706537 182 N 50000 contig no
18706538 18874835 183 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 183 CR626910.5 1 168298 +
18874836 18924835 184 N 50000 contig no
18924836 18990080 185 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 187 CR855396.12 1 65245 +
18990081 19112917 186 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 187 CR847859.13 2001 124837 +
19112918 19253075 187 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 187 BX546475.20 2001 142158 +
19253076 19303075 188 N 50000 contig no
19303076 19466455 189 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 192 BX927303.11 1 163380 -
19466456 19483671 190 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 192 BX510310.14 1 17216 -
19483672 19711354 191 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 192 BX255933.7 2001 229683 -
19711355 19803554 192 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 192 BX510937.6 1 92200 -
19803555 19853554 193 N 50000 contig no
19853555 19999597 194 FClick to retrieve finished assembled sequence in green bar: rank(s) 194 - 194 BX901950.7 1 146043 +
19999598 20049597 195 N 50000 contig no
20049598 20194563 196 FClick to retrieve finished assembled sequence in green bar: rank(s) 196 - 196 CT027745.11 1 144966 +
20194564 20244563 197 N 50000 contig yes
20244564 20410910 198 FClick to retrieve finished assembled sequence in green bar: rank(s) 198 - 198 CT030225.14 1 166347 +
20410911 20460910 199 N 50000 contig no
20460911 20657314 200 FClick to retrieve finished assembled sequence in green bar: rank(s) 200 - 200 AL928556.7 1 196404 +
20657315 20707314 201 N 50000 contig no
20707315 20918408 202 FClick to retrieve finished assembled sequence in green bar: rank(s) 202 - 202 BX005335.9 1 211094 +
20918409 20968408 203 N 50000 contig no
20968409 21117823 204 FClick to retrieve finished assembled sequence in green bar: rank(s) 204 - 204 BX571897.12 1 149415 +
21117824 21167823 205 N 50000 contig no
21167824 21376987 206 FClick to retrieve finished assembled sequence in green bar: rank(s) 206 - 206 CR589950.13 1 209164 +
21376988 21426987 207 N 50000 contig no
21426988 21613032 208 FClick to retrieve finished assembled sequence in green bar: rank(s) 208 - 208 AL935182.13 1 186045 +
21613033 21663032 209 N 50000 contig no
21663033 21847792 210 FClick to retrieve finished assembled sequence in green bar: rank(s) 210 - 210 BX004808.5 1 184760 +
21847793 21897792 211 N 50000 contig no
21897793 22046984 212 FClick to retrieve finished assembled sequence in green bar: rank(s) 212 - 213 BX005413.7 1 149192 +
22046985 22204170 213 FClick to retrieve finished assembled sequence in green bar: rank(s) 212 - 213 BX005371.20 2001 159186 +
22204171 22254170 214 N 50000 contig no
22254171 22286368 215 FClick to retrieve finished assembled sequence in green bar: rank(s) 215 - 216 CR388181.8 1 32198 +
22286369 22460074 216 FClick to retrieve finished assembled sequence in green bar: rank(s) 215 - 216 CR407558.22 2001 175706 +
22460075 22510074 217 N 50000 contig no
22510075 22674571 218 FClick to retrieve finished assembled sequence in green bar: rank(s) 218 - 218 CU457790.6 1 164497 +
22674572 22724571 219 N 50000 contig no
22724572 22766550 220 FClick to retrieve finished assembled sequence in green bar: rank(s) 220 - 220 FP103000.4 1 41979 +
22766551 22816550 221 N 50000 contig no
22816551 22973148 222 FClick to retrieve finished assembled sequence in green bar: rank(s) 222 - 222 BX005055.5 1 156598 +
22973149 23023148 223 N 50000 contig no
23023149 23219104 224 FClick to retrieve finished assembled sequence in green bar: rank(s) 224 - 224 CR931800.13 1 195956 +
23219105 23269104 225 N 50000 contig no
23269105 23492104 226 FClick to retrieve finished assembled sequence in green bar: rank(s) 226 - 226 BX004839.9 1 223000 +
23492105 23542104 227 N 50000 contig no
23542105 23575052 228 FClick to retrieve finished assembled sequence in green bar: rank(s) 228 - 228 CU693496.6 1 32948 +
23575053 23625052 229 N 50000 contig no
23625053 23683082 230 FClick to retrieve finished assembled sequence in green bar: rank(s) 230 - 230 BX928741.7 1 58030 +
23683083 23733082 231 N 50000 contig no
23733083 23772609 232 FClick to retrieve finished assembled sequence in green bar: rank(s) 232 - 232 CU694303.14 1 39527 +
23772610 23822609 233 N 50000 contig no
23822610 24008487 234 FClick to retrieve finished assembled sequence in green bar: rank(s) 234 - 234 CR388371.8 1 185878 +
24008488 24058487 235 N 50000 contig no
24058488 24108487 236 N 50000 clone no
24108488 24158487 237 N 50000 contig no
24158488 24208487 238 N 50000 clone no
24208488 24258487 239 N 50000 contig no
24258488 24309534 240 FClick to retrieve finished assembled sequence in green bar: rank(s) 240 - 240 CU462981.5 1 51047 +
24309535 24359534 241 N 50000 contig no
24359535 24404546 242 FClick to retrieve finished assembled sequence in green bar: rank(s) 242 - 242 FP017169.6 1 45012 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

Help

Clone Summary

Number of gaps
90
Gap types
type-2
1
type-3
89
Total clones
142
Clone HTGS Phases
finished
139
unfinished
1
Number of clones w/o accession
2
Clones w/o htgs phase
2
Non-htgs clonenames
DKEY-87O9 (project unknown), CH73-294H9 (project unknown)

Overlap Summary

Total overlap length of fin clones
353,171
Total finished length of fin clones w/ overlap
20,055,314
Total finished length of fin clones w/o overlap
19,702,143
Total overlap length of fin+unfin clones
353,171
Total finished length of fin+unfin clones w/ overlap
20,276,013
Total finished length of fin+unfin clones w/o overlap
19,922,842

Dovetails

# rank accession status length date
1 8 CR788244.9 unfinished 29 Wed, 01 Jul 2015 02:25
2 116 CR391980.17 unfinished 1 Wed, 01 Jul 2015 02:25
3 123 AL953891.10 unfinished 38 Wed, 01 Jul 2015 02:25
4 167 CT573327.6 unfinished 1 Wed, 01 Jul 2015 02:25

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Other links

* quick link - http://q.sanger.ac.uk/ddxovxlq