ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region AB_16 (TPF updated: 2013-10-04)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 BUSM1-153O2
ctg4080
dZ153O2
EPN details
AL672088.9
finished
  GAP (type-3) length unknown    
3 BUSM1-55H21
ctg4233
dZ55H21
EPN details
AL672072.18
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 93475 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 AL672088.9 1 93475 +
93476 143475 2 N 50000 contig no
143476 244172 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 AL672072.18 1 100697 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 BUSM1-153O2
ctg4080
dZ153O2
EPN details
Submitted to EMBL
12-JAN-09
AL672088.9
finished
93475 Amemiya        
  GAP (type-3) length unknown                  
3 BUSM1-55H21
ctg4233
dZ55H21
EPN details
Submitted to EMBL
12-JAN-09
AL672072.18
finished
100697 Amemiya        

Statistics

Clone Summary

Number of gaps
1
Gap types
type-3
1
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
194,172
Total finished length of fin clones w/o overlap
194,172
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
194,172
Total finished length of fin+unfin clones w/o overlap
194,172

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Other links

* quick link - http://q.sanger.ac.uk/9qycx2pi