ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region AB_12 (TPF updated: 2006-03-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 BUSM1-227H09
ctg4171
dZ227H09
EPN details
AL645798.2
finished
  GAP (type-3) length unknown    
3 BUSM1-64D20
ctg4173
dZ64D20
EPN details
AL928938.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 80318 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 AL645798.2 1 80318 +
80319 130318 2 N 50000 contig no
130319 227294 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 AL928938.3 1 96976 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 BUSM1-227H09
ctg4171
dZ227H09
EPN details
Submitted to EMBL
12-JAN-09
AL645798.2
finished
80318 Amemiya        
  GAP (type-3) length unknown                  
3 BUSM1-64D20
ctg4173
dZ64D20
EPN details
Submitted to EMBL
12-JAN-09
AL928938.3
finished
96976 Amemiya        

Statistics

Clone Summary

Number of gaps
1
Gap types
type-3
1
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
177,294
Total finished length of fin clones w/o overlap
177,294
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
177,294
Total finished length of fin+unfin clones w/o overlap
177,294

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* quick link - http://q.sanger.ac.uk/c5syf2ti