ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region AB_22 (TPF updated: 2006-03-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 BUSM1-129I22
ctg4294
Cl/Pr dZ129I22/PCYPAC6 swap
EPN details
AL592495.1
finished
  GAP (type-3) length unknown    
3 BUSM1-29G17
ctg4297
dZ29G17
EPN details
BX004777.15
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 84543 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 AL592495.1 1 84543 +
84544 134543 2 N 50000 contig no
134544 233446 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 BX004777.15 1 98903 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 BUSM1-129I22
ctg4294
Cl/Pr dZ129I22/PCYPAC6 swap
EPN details
Submitted to EMBL
12-JAN-09
AL592495.1
finished
84543 Amemiya        
  GAP (type-3) length unknown                  
3 BUSM1-29G17
ctg4297
dZ29G17
EPN details
Analysed
03-FEB-04
BX004777.15
finished
98903 Amemiya        

Statistics

Clone Summary

Number of gaps
1
Gap types
type-3
1
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
183,446
Total finished length of fin clones w/o overlap
183,446
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
183,446
Total finished length of fin+unfin clones w/o overlap
183,446

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Other links

* quick link - http://q.sanger.ac.uk/4y4uyynj