ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__WSB_EiJ__11 (TPF updated: 2017-11-22)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1
WSB/EiJ_MMCHR11_CTG1
LT629152
LT629152.1
finished
  GAP (type-3) length unknown    
3
WSB/EiJ_MMCHR11_CTG2
LT629153
LT629153.1
finished
  GAP (type-3) length unknown    
5
WSB/EiJ_MMCHR11_CTG3
LT629154
LT629154.1
finished

AGP

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AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 215264 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 LT629152.1 1 215264 +
215265 265264 2 N 50000 contig no
265265 659290 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 LT629153.1 1 394026 +
659291 709290 4 N 50000 contig no
709291 1031511 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 LT629154.1 1 322221 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
2
Gap types
type-3
2
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
931,511
Total finished length of fin clones w/o overlap
931,511
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
931,511
Total finished length of fin+unfin clones w/o overlap
931,511

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