ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__PWK_PhJ__11 (TPF updated: 2017-11-24)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1
PWK/PhJ_MMCHR11_CTG1
LT629149
LT629149.1
finished
  GAP (type-3) length unknown    
3
PWK/PhJ_MMCHR11_CTG2
LT629150
LT629150.1
finished
  GAP (type-3) length unknown    
5
PWK/PhJ_MMCHR11_CTG3
LT629151
LT629151.1
finished

AGP

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AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 186144 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 LT629149.1 1 186144 +
186145 236144 2 N 50000 contig no
236145 627064 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 LT629150.1 1 390920 +
627065 677064 4 N 50000 contig no
677065 1046031 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 LT629151.1 1 368967 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
2
Gap types
type-3
2
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
946,031
Total finished length of fin clones w/o overlap
946,031
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
946,031
Total finished length of fin+unfin clones w/o overlap
946,031

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