ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region GRC__ZEBRAFISH__ALT_DRER_TU_1__7 (TPF updated: 2017-11-22)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 CH73-126O18
alt_ctg7_1_1
zH126O18
CT573787.20
finished
2 CH211-142B20
alt_ctg7_1_1
zC142B20
CR354586.16
finished
3
alt_ctg7_1_1
CABZ01040626
CABZ01040626.1
finished
  GAP (type-3) length unknown    
5 CH211-42C5
alt_ctg7_1_2
zC42C5
BX324230.15
finished
6 DKEY-285D11
alt_ctg7_1_2
zK285D11
BX957339.36
finished
7
alt_ctg7_1_2
CABZ01021258
CABZ01021258.1
finished
  GAP (type-3) length unknown    
9 CH211-158H16
alt_ctg7_1_3
zC158H16
BX470137.6
finished
10 CH211-186I18
alt_ctg7_1_3
zC186I18
CU179730.13
finished
11 CH211-157C7
alt_ctg7_1_3
zC157C7
BX000984.8
finished
  GAP (type-3) length unknown    
13 DKEY-15B23
alt_ctg7_1_4
CONTAINER
zK15B23
CR388156.7
finished
14 CH211-210N14
alt_ctg7_1_4
CONTAINED
zC210N14
CR450816.6
finished
13 DKEY-15B23
alt_ctg7_1_4
CONTAINER
zK15B23
CR388156.7
finished
  GAP (type-3) length unknown    
16 CH73-119P20
alt_ctg7_1_5
zH119P20
CU929274.8
finished
17 CH211-236C4
alt_ctg7_1_5
zC236C4
BX248389.8
finished
18 CH211-132L2
alt_ctg7_1_5
zC132L2
CT030046.12
finished
  GAP (type-3) length unknown    
20 CH73-239F14
alt_ctg7_1_6
zH239F14
LO018376.1
contiguous
21 CH211-194H8
alt_ctg7_1_6
zC194H8
BX548030.10
finished
22 DKEY-203E10
alt_ctg7_1_6
zK203E10
CR627485.10
finished
  GAP (type-3) length unknown    
24 DKEY-172H23
alt_ctg7_1_7
CONTAINER
zK172H23
CU280645.6
finished
25 CH211-188B5
alt_ctg7_1_7
CONTAINED
zC188B5
CU179754.6
finished
24 DKEY-172H23
alt_ctg7_1_7
CONTAINER
zK172H23
CU280645.6
finished
  GAP (type-3) length unknown    
27 CH73-160M6
alt_ctg7_1_8
zH160M6
FP101884.8
finished
28 DKEY-103L5
alt_ctg7_1_8
zK103L5
BX855587.13
finished
29 CH211-106J24
alt_ctg7_1_8
zC106J24
BX005410.7
finished
  GAP (type-3) length unknown    
31 CH211-134B16
alt_ctg7_1_9
zC134B16
AL928976.4
finished
32 CH211-208A20
alt_ctg7_1_9
zC208A20
BX088692.7
finished
33
alt_ctg7_1_9
CABZ01014623
CABZ01014623.1
finished
  GAP (type-3) length unknown    
35 DKEYP-22H4
alt_ctg7_1_10
CONTAINER
zKp22H4
BX890598.10
finished
36 DKEY-46H11
alt_ctg7_1_10
CONTAINED
zK46H11
CR848687.8
finished
35 DKEYP-22H4
alt_ctg7_1_10
CONTAINER
zKp22H4
BX890598.10
finished
37 DKEY-261N7
alt_ctg7_1_10
zK261N7
BX897661.7
finished
38 CH211-250G21
alt_ctg7_1_10
zC250G21
CR450755.6
finished
39 CH211-133P16
alt_ctg7_1_10
zC133P16
CU928000.12
finished
  GAP (type-3) length unknown    
41 CH211-262G18
alt_ctg7_1_11
zC262G18
CT027768.7
finished
42 DKEY-230N5
alt_ctg7_1_11
zK230N5
CR931785.6
finished
43 CH73-97A24
alt_ctg7_1_11
zH97A24
CU179759.8
finished
  GAP (type-3) length unknown    
45
alt_ctg7_1_12
CABZ01084088
CABZ01084088.1
finished
46 CH211-209H11
alt_ctg7_1_12
zC209H11
AL935193.9
finished
47 DKEYP-2B10
alt_ctg7_1_12
zKp2B10
BX323024.12
finished
  GAP (type-3) length unknown    
49 CH73-196E11
alt_ctg7_1_13
zH196E11
CU571321.6
finished
50 DKEY-218D4
alt_ctg7_1_13
zK218D4
CR855334.6
finished
51 CH211-212K18
alt_ctg7_1_13
zC212K18
CR352328.13
finished
  GAP (type-3) length unknown    
53 CH211-285J22
alt_ctg7_1_14
zC285J22
CR339062.17
finished
54 CH211-14B6
alt_ctg7_1_14
zC14B6
CR352261.8
finished
55 DKEY-170H8
alt_ctg7_1_14
zK170H8
BX322601.9
finished
  GAP (type-3) length unknown    
57 DKEY-147I16
alt_ctg7_1_15
zK147I16
BX897745.14
finished
58 DKEY-19B23
alt_ctg7_1_15
zK19B23
CR318653.8
finished
  GAP (type-3) length unknown    
60 DKEY-37N24
alt_ctg7_1_16
zK37N24
CU570992.9
finished
61 CH211-199I10
alt_ctg7_1_16
zC199I10
AL935317.10
finished
62 CH211-262E4
alt_ctg7_1_16
zC262E4
AL954772.23
finished
  GAP (type-3) length unknown    
64 DKEY-11F12
alt_ctg7_1_17
zK11F12
BX005323.10
finished
65 CH211-214J2
alt_ctg7_1_17
zC214J2
BX005310.6
finished
66 DKEY-112A7
alt_ctg7_1_17
zK112A7
BX649313.6
finished
  GAP (type-3) length unknown    
68 DKEY-171C9
alt_ctg7_1_18
zK171C9
CR381635.11
finished
69 DKEY-257F6
alt_ctg7_1_18
zK257F6
CU302308.6
finished
70 DKEY-176K21
alt_ctg7_1_18
zK176K21
CU104770.18
finished
71 CH211-151K15
alt_ctg7_1_18
zC151K15
CR352332.11
finished
  GAP (type-3) length unknown    
73 DKEY-11K2
alt_ctg7_1_19
zK11K2
CR376795.8
finished
74 CH211-286N5
alt_ctg7_1_19
zC286N5
BX005155.4
finished
75 DKEYP-75H12
alt_ctg7_1_19
zKp75H12
CR318672.5
finished
  GAP (type-3) length unknown    
77 DKEY-23I12
alt_ctg7_1_20
zK23I12
AL954715.13
finished
78 CH211-284N24
alt_ctg7_1_20
zC284N24
BX000446.6
finished
79 CH73-368P22
alt_ctg7_1_20
zH368P22
CU464085.9
finished
  GAP (type-3) length unknown    
81 DKEY-87H7
alt_ctg7_1_21
zK87H7
BX927397.10
finished
82 CH211-213D2
alt_ctg7_1_21
zC213D2
AL954309.11
finished
83 DKEYP-93A2
alt_ctg7_1_21
zKp93A2
BX537340.15
finished
  GAP (type-3) length unknown    
85 CH211-77A11
alt_ctg7_1_22
zC77A11
BX005056.7
finished
86 CH211-230K10
alt_ctg7_1_22
zC230K10
AL935204.10
finished
87 CH211-235P24
alt_ctg7_1_22
zC235P24
CR339061.13
finished
  GAP (type-3) length unknown    
89 DKEY-102F17
alt_ctg7_1_23
zK102F17
BX855595.2
finished
90 CH211-208C6
alt_ctg7_1_23
CONTAINER
zC208C6
BX323591.13
finished
91 CH211-93K3
alt_ctg7_1_23
CONTAINED
zC93K3
CR352259.19
finished
90 CH211-208C6
alt_ctg7_1_23
CONTAINER
zC208C6
BX323591.13
finished
  GAP (type-3) length unknown    
93 DKEY-97O18
alt_ctg7_1_24
zK97O18
CR352249.24
finished
94 CH211-32G19
alt_ctg7_1_24
zC32G19
CR456682.4
finished
95 DKEYP-8E5
alt_ctg7_1_24
zKp8E5
CR556715.7
finished
  GAP (type-3) length unknown    
97 DKEY-50E6
alt_ctg7_1_25
zK50E6
CR388046.14
finished
98 DKEY-224L8
alt_ctg7_1_25
zK224L8
CR407582.7
finished
99 DKEY-88A11
alt_ctg7_1_25
zK88A11
BX914219.10
finished
  GAP (type-3) length unknown    
101 CH211-286F4
alt_ctg7_1_26
zC286F4
BX001033.6
finished
102 CH211-150D17
alt_ctg7_1_26
zC150D17
CR381651.9
finished
103 CH211-94N14
alt_ctg7_1_26
zC94N14
CR392043.5
finished
  GAP (type-3) length unknown    
105 CH211-194P6
alt_ctg7_1_27
zC194P6
BX571811.5
finished
106 DKEY-71K16
alt_ctg7_1_27
zK71K16
BX284688.13
finished
107 CH211-100L3
alt_ctg7_1_27
zC100L3
BX323587.5
finished
  GAP (type-3) length unknown    
109 DKEY-34G19
alt_ctg7_1_28
CONTAINER
zK34G19
CR927368.12
finished
110 DKEY-81P21
alt_ctg7_1_28
CONTAINED
zK81P21
CR352307.11
finished
109 DKEY-34G19
alt_ctg7_1_28
CONTAINER
zK34G19
CR927368.12
finished
111 CH211-198A3
alt_ctg7_1_28
zC198A3
BX119977.10
finished
112 CH211-98N17
alt_ctg7_1_28
zC98N17
CR388195.7
finished
  GAP (type-3) length unknown    
114 DKEY-148A17
alt_ctg7_1_29
zK148A17
BX005082.7
finished
115 DKEY-75C23
alt_ctg7_1_29
zK75C23
CR354373.17
finished
116 DKEY-193L8
alt_ctg7_1_29
zK193L8
CR356247.9
finished
  GAP (type-3) length unknown    
118 RP71-23N3
alt_ctg7_1_30
bZ23N3
CR848715.9
finished
119 DKEY-29I3
alt_ctg7_1_30
zK29I3
CR293522.9
finished
120 CH211-253F20
alt_ctg7_1_30
zC253F20
BX664604.6
finished
121 CH211-125I6
alt_ctg7_1_30
zC125I6
CR381607.8
finished
122 CH73-89I23
alt_ctg7_1_30
zH89I23
FP015866.14
finished
  GAP (type-3) length unknown    
124 DKEY-117I6
alt_ctg7_1_31
CONTAINER
zK117I6
CR394544.15
finished
125 CH211-266N15
alt_ctg7_1_31
CONTAINED
zC266N15
BX119966.7
finished
124 DKEY-117I6
alt_ctg7_1_31
CONTAINER
zK117I6
CR394544.15
finished
  GAP (type-3) length unknown    
127 CH211-54E20
alt_ctg7_1_32
zC54E20
CU407308.4
finished
128 DKEYP-15D11
alt_ctg7_1_32
zKp15D11
CR388159.9
finished
129 DKEY-245J10
alt_ctg7_1_32
zK245J10
CR388023.13
finished
  GAP (type-3) length unknown    
131 CH211-212M22
alt_ctg7_1_33
zC212M22
BX248235.4
finished
132 CH211-215J7
alt_ctg7_1_33
zC215J7
BX004790.9
finished
133 DKEY-65B16
alt_ctg7_1_33
zK65B16
BX005327.9
finished
  GAP (type-3) length unknown    
135 CH211-150E22
alt_ctg7_1_34
zC150E22
AL929206.6
finished
136 DKEY-151P11
alt_ctg7_1_34
zK151P11
CU041390.9
finished
  GAP (type-3) length unknown    
138 DKEY-11G15
alt_ctg7_1_35
zK11G15
CR759753.9
finished
139 DKEY-14K7
alt_ctg7_1_35
zK14K7
BX072581.5
finished
140 DKEY-96K10
alt_ctg7_1_35
zK96K10
CR847539.12
finished
  GAP (type-3) length unknown    
142 CH211-189A15
alt_ctg7_1_36
zC189A15
CT027744.14
finished
143 CH211-214I13
alt_ctg7_1_36
zC214I13
BX322542.23
finished
144 DKEY-56M19
alt_ctg7_1_36
zK56M19
BX511128.8
finished
  GAP (type-3) length unknown    
146 DKEY-71E3
alt_ctg7_1_37
zK71E3
BX511136.4
finished
147 DKEY-77B9
alt_ctg7_1_37
zK77B9
BX005274.11
finished
148 CH211-235L10
alt_ctg7_1_37
zC235L10
BX511110.5
finished
  GAP (type-3) length unknown    
150 DKEY-262L17
alt_ctg7_1_38
zK262L17
BX511025.10
finished
151 DKEYP-21D12
alt_ctg7_1_38
zKp21D12
BX321892.13
finished
152 CH73-200D4
alt_ctg7_1_38
zH200D4
FO704745.2
contiguous
  GAP (type-3) length unknown    
154 CH73-226I7
alt_ctg7_1_39
zH226I7
FO704769.2
contiguous
155 CH211-142O6
alt_ctg7_1_39
zC142O6
CR385058.15
finished
156 DKEY-56M16
alt_ctg7_1_39
zK56M16
CR847947.14
finished
  GAP (type-3) length unknown    
158 DKEY-287H22
alt_ctg7_1_40
zK287H22
BX663616.13
finished
159 DKEY-29N1
alt_ctg7_1_40
zK29N1
BX004838.8
finished
160 CH211-188C11
alt_ctg7_1_40
zC188C11
CT476811.16
finished
  GAP (type-3) length unknown    
162 DKEY-231L24
alt_ctg7_1_41
zK231L24
CT737169.12
finished
163 CH211-68H23
alt_ctg7_1_41
zC68H23
CU179648.18
finished
164 DKEY-286H2
alt_ctg7_1_41
zK286H2
CT737190.13
finished
  GAP (type-3) length unknown    
166 CH211-230K7
alt_ctg7_1_42
zC230K7
BX248306.5
finished
167 CH211-215A18
alt_ctg7_1_42
zC215A18
AL807378.5
finished
168 CH211-223J10
alt_ctg7_1_42
zC223J10
AL954337.9
finished
169 CH211-245P24
alt_ctg7_1_42
zC245P24
AL954648.7
finished
  GAP (type-3) length unknown    
171 DKEY-288C23
alt_ctg7_1_43
zK288C23
CT573494.14
finished
172 CH211-239F7
alt_ctg7_1_43
zC239F7
CU207215.4
finished
173 CH211-159M16
alt_ctg7_1_43
zC159M16
CR318647.10
finished
  GAP (type-3) length unknown    
175 CH211-161N23
alt_ctg7_1_44
zC161N23
BX000523.24
finished
176 CH211-139O4
alt_ctg7_1_44
zC139O4
BX248312.11
finished
177 CH211-132N7
alt_ctg7_1_44
zC132N7
BX510656.7
finished
  GAP (type-3) length unknown    
179 CH211-266O5
alt_ctg7_1_45
zC266O5
BX247878.5
finished
180 CH211-247M3
alt_ctg7_1_45
CONTAINER
zC247M3
BX284113.5
finished
181 CH211-211A4
alt_ctg7_1_45
CONTAINED
zC211A4
CR352339.15
finished
180 CH211-247M3
alt_ctg7_1_45
CONTAINER
zC247M3
BX284113.5
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 4976 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CT573787.20 120304 125279 -
4977 145317 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CR354586.16 1 140341 -
145318 158849 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CABZ01040626.1 14704 28235 +
158850 208849 4 N 50000 contig no
208850 279136 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 BX324230.15 109616 179902 -
279137 403751 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 BX957339.36 916 125530 +
403752 421053 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 CABZ01021258.1 7015 24316 +
421054 471053 8 N 50000 contig no
471054 534414 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 BX470137.6 55566 118926 -
534415 658967 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 CU179730.13 7 124559 +
658968 760706 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 BX000984.8 1 101739 -
760707 810706 12 N 50000 contig no
810707 831816 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 CR388156.7 1 21110 +
831817 988957 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 CR450816.6 1 157141 -
988958 1030100 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 CR388156.7 174664 215806 +
1030101 1080100 16 N 50000 contig no
1080101 1082165 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 19 CU929274.8 1 2065 +
1082166 1216347 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 19 BX248389.8 1 134182 -
1216348 1273951 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 19 CT030046.12 47262 104865 +
1273952 1323951 20 N 50000 contig no
1323952 1351542 21 A LO018376.1 1 27591 +
1351543 1492180 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 23 BX548030.10 1 140638 +
1492181 1642097 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 23 CR627485.10 30858 180774 +
1642098 1692097 24 N 50000 contig no
1692098 1706690 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 CU280645.6 1 14593 +
1706691 1847233 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 CU179754.6 1 140543 +
1847234 1847277 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 CU280645.6 154202 154245 +
1847278 1897277 28 N 50000 contig no
1897278 1977526 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 FP101884.8 1 80249 +
1977527 2109361 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 BX855587.13 1 131835 +
2109362 2179241 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 BX005410.7 1 69880 -
2179242 2229241 32 N 50000 contig no
2229242 2254959 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 35 AL928976.4 1 25718 +
2254960 2464752 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 35 BX088692.7 282 210074 -
2464753 2492172 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 35 CABZ01014623.1 12721 40140 +
2492173 2542172 36 N 50000 contig no
2542173 2615086 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 42 BX890598.10 1 72914 +
2615087 2702526 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 42 CR848687.8 1 87440 +
2702527 2704052 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 42 BX890598.10 164955 166480 +
2704053 2861268 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 42 BX897661.7 1 157216 -
2861269 2899147 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 42 CR450755.6 2002 39880 +
2899148 2950489 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 42 CU928000.12 34693 86034 +
2950490 3000489 43 N 50000 contig no
3000490 3029783 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 46 CT027768.7 1 29294 +
3029784 3223988 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 46 CR931785.6 2327 196531 +
3223989 3273968 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 46 CU179759.8 1 49980 -
3273969 3323968 47 N 50000 contig no
3323969 3328906 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 48 - 50 CABZ01084088.1 1 4938 +
3328907 3536965 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 48 - 50 AL935193.9 1 208059 +
3536966 3573589 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 48 - 50 BX323024.12 24910 61533 +
3573590 3623589 51 N 50000 contig no
3623590 3662550 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 54 CU571321.6 1 38961 +
3662551 3845593 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 54 CR855334.6 1 183043 -
3845594 3998073 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 54 CR352328.13 1 152480 -
3998074 4048073 55 N 50000 contig no
4048074 4130453 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 58 CR339062.17 26862 109241 -
4130454 4264758 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 58 CR352261.8 34 134338 -
4264759 4358091 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 58 BX322601.9 1 93333 -
4358092 4408091 59 N 50000 contig no
4408092 4545912 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 61 BX897745.14 1 137821 -
4545913 4755355 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 61 CR318653.8 25648 235090 +
4755356 4805355 62 N 50000 contig no
4805356 4856296 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 65 CU570992.9 1 50941 +
4856297 5046325 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 65 AL935317.10 1 190029 -
5046326 5050159 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 65 AL954772.23 170581 174414 +
5050160 5100159 66 N 50000 contig no
5100160 5156460 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 BX005323.10 1 56301 +
5156461 5378439 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 BX005310.6 1 221979 +
5378440 5410141 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 BX649313.6 72673 104374 +
5410142 5460141 70 N 50000 contig no
5460142 5581692 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 74 CR381635.11 51508 173058 -
5581693 5744074 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 74 CU302308.6 234 162615 +
5744075 5832158 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 74 CU104770.18 2001 90084 +
5832159 5950820 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 74 CR352332.11 1 118662 -
5950821 6000820 75 N 50000 contig no
6000821 6008426 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 76 - 78 CR376795.8 110818 118423 -
6008427 6147791 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 76 - 78 BX005155.4 1 139365 -
6147792 6239472 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 76 - 78 CR318672.5 1 91681 -
6239473 6289472 79 N 50000 contig no
6289473 6314364 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 82 AL954715.13 170993 195884 -
6314365 6474366 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 82 BX000446.6 1 160002 -
6474367 6575480 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 82 CU464085.9 1343 102456 +
6575481 6625480 83 N 50000 contig no
6625481 6738348 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 84 - 86 BX927397.10 1 112868 +
6738349 6947543 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 84 - 86 AL954309.11 1 209195 +
6947544 7024881 86 FClick to retrieve finished assembled sequence in green bar: rank(s) 84 - 86 BX537340.15 114733 192070 +
7024882 7074881 87 N 50000 contig no
7074882 7159529 88 FClick to retrieve finished assembled sequence in green bar: rank(s) 88 - 90 BX005056.7 1 84648 +
7159530 7363744 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 88 - 90 AL935204.10 1 204215 +
7363745 7366566 90 FClick to retrieve finished assembled sequence in green bar: rank(s) 88 - 90 CR339061.13 108512 111333 +
7366567 7416566 91 N 50000 contig no
7416567 7449738 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 95 BX855595.2 1 33172 +
7449739 7449739 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 95 BX323591.13 2001 2001 +
7449740 7575663 94 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 95 CR352259.19 1 125924 +
7575664 7655698 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 92 - 95 BX323591.13 121734 201768 +
7655699 7705698 96 N 50000 contig no
7705699 7883840 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 99 CR352249.24 1 178142 +
7883841 8077053 98 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 99 CR456682.4 1 193213 -
8077054 8154215 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 99 CR556715.7 1 77162 -
8154216 8204215 100 N 50000 contig no
8204216 8286905 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 103 CR388046.14 128521 211210 -
8286906 8487598 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 103 CR407582.7 1 200693 -
8487599 8488484 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 103 BX914219.10 125119 126004 +
8488485 8538484 104 N 50000 contig no
8538485 8644171 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 107 BX001033.6 1 105687 +
8644172 8798512 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 107 CR381651.9 1 154341 +
8798513 8901514 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 107 CR392043.5 9954 112955 +
8901515 8951514 108 N 50000 contig no
8951515 8958666 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 111 BX571811.5 211893 219044 -
8958667 9195450 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 111 BX284688.13 1 236784 +
9195451 9250157 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 111 BX323587.5 1 54707 -
9250158 9300157 112 N 50000 contig no
9300158 9351693 113 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 117 CR927368.12 1 51536 +
9351694 9468480 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 117 CR352307.11 1 116787 +
9468481 9470482 115 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 117 CR927368.12 162703 164704 +
9470483 9652668 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 117 BX119977.10 1 182186 -
9652669 9670294 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 117 CR388195.7 175585 193210 +
9670295 9720294 118 N 50000 contig no
9720295 9865744 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 121 BX005082.7 1 145450 +
9865745 10011478 120 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 121 CR354373.17 1 145734 +
10011479 10083904 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 121 CR356247.9 139360 211785 +
10083905 10133904 122 N 50000 contig no
10133905 10183029 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 127 CR848715.9 91639 140763 -
10183030 10379279 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 127 CR293522.9 1 196250 +
10379280 10527787 125 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 127 BX664604.6 2001 150508 +
10527788 10620717 126 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 127 CR381607.8 2001 94930 +
10620718 10710124 127 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 127 FP015866.14 6899 96305 +
10710125 10760124 128 N 50000 contig no
10760125 10787984 129 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 131 CR394544.15 166967 194826 -
10787985 10970797 130 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 131 BX119966.7 1 182813 +
10970798 10973610 131 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 131 CR394544.15 1 2813 -
10973611 11023610 132 N 50000 contig no
11023611 11065198 133 FClick to retrieve finished assembled sequence in green bar: rank(s) 133 - 135 CU407308.4 63239 104826 -
11065199 11239654 134 FClick to retrieve finished assembled sequence in green bar: rank(s) 133 - 135 CR388159.9 1 174456 +
11239655 11272302 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 133 - 135 CR388023.13 101799 134446 +
11272303 11322302 136 N 50000 contig no
11322303 11385989 137 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 139 BX248235.4 13481 77167 -
11385990 11595655 138 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 139 BX004790.9 1 209666 -
11595656 11650492 139 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 139 BX005327.9 1 54837 -
11650493 11700492 140 N 50000 contig no
11700493 11853618 141 FClick to retrieve finished assembled sequence in green bar: rank(s) 141 - 142 AL929206.6 1 153126 -
11853619 11925476 142 FClick to retrieve finished assembled sequence in green bar: rank(s) 141 - 142 CU041390.9 9209 81066 +
11925477 11975476 143 N 50000 contig no
11975477 12179277 144 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 146 CR759753.9 1 203801 -
12179278 12192226 145 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 146 BX072581.5 1 12949 -
12192227 12281706 146 FClick to retrieve finished assembled sequence in green bar: rank(s) 144 - 146 CR847539.12 1 89480 -
12281707 12331706 147 N 50000 contig no
12331707 12406945 148 FClick to retrieve finished assembled sequence in green bar: rank(s) 148 - 150 CT027744.14 1 75239 +
12406946 12466538 149 FClick to retrieve finished assembled sequence in green bar: rank(s) 148 - 150 BX322542.23 1 59593 +
12466539 12560530 150 FClick to retrieve finished assembled sequence in green bar: rank(s) 148 - 150 BX511128.8 1 93992 -
12560531 12610530 151 N 50000 contig no
12610531 12703208 152 FClick to retrieve finished assembled sequence in green bar: rank(s) 152 - 154 BX511136.4 1 92678 +
12703209 12801231 153 FClick to retrieve finished assembled sequence in green bar: rank(s) 152 - 154 BX005274.11 423 98445 +
12801232 12890024 154 FClick to retrieve finished assembled sequence in green bar: rank(s) 152 - 154 BX511110.5 690 89482 +
12890025 12940024 155 N 50000 contig no
12940025 13052320 156 FClick to retrieve finished assembled sequence in green bar: rank(s) 156 - 157 BX511025.10 1 112296 +
13052321 13248025 157 FClick to retrieve finished assembled sequence in green bar: rank(s) 156 - 157 BX321892.13 1 195705 -
13248026 13259752 158 A FO704745.2 91693 103419 +
13259753 13309752 159 N 50000 contig no
13309753 13347616 160 A FO704769.2 1 37864 +
13347617 13507336 161 FClick to retrieve finished assembled sequence in green bar: rank(s) 161 - 162 CR385058.15 1 159720 -
13507337 13705040 162 FClick to retrieve finished assembled sequence in green bar: rank(s) 161 - 162 CR847947.14 7979 205682 +
13705041 13755040 163 N 50000 contig no
13755041 13890268 164 FClick to retrieve finished assembled sequence in green bar: rank(s) 164 - 166 BX663616.13 1 135228 +
13890269 14116428 165 FClick to retrieve finished assembled sequence in green bar: rank(s) 164 - 166 BX004838.8 1 226160 -
14116429 14144089 166 FClick to retrieve finished assembled sequence in green bar: rank(s) 164 - 166 CT476811.16 1 27661 -
14144090 14194089 167 N 50000 contig no
14194090 14218760 168 FClick to retrieve finished assembled sequence in green bar: rank(s) 168 - 170 CT737169.12 73041 97711 -
14218761 14394173 169 FClick to retrieve finished assembled sequence in green bar: rank(s) 168 - 170 CU179648.18 5571 180983 +
14394174 14402694 170 FClick to retrieve finished assembled sequence in green bar: rank(s) 168 - 170 CT737190.13 1 8521 -
14402695 14452694 171 N 50000 contig no
14452695 14570198 172 FClick to retrieve finished assembled sequence in green bar: rank(s) 172 - 175 BX248306.5 1 117504 +
14570199 14768898 173 FClick to retrieve finished assembled sequence in green bar: rank(s) 172 - 175 AL807378.5 1 198700 +
14768899 14971223 174 FClick to retrieve finished assembled sequence in green bar: rank(s) 172 - 175 AL954337.9 1 202325 -
14971224 15107278 175 FClick to retrieve finished assembled sequence in green bar: rank(s) 172 - 175 AL954648.7 1 136055 -
15107279 15157278 176 N 50000 contig no
15157279 15273798 177 FClick to retrieve finished assembled sequence in green bar: rank(s) 177 - 179 CT573494.14 1 116520 +
15273799 15430056 178 FClick to retrieve finished assembled sequence in green bar: rank(s) 177 - 179 CU207215.4 1 156258 -
15430057 15464930 179 FClick to retrieve finished assembled sequence in green bar: rank(s) 177 - 179 CR318647.10 139816 174689 +
15464931 15514930 180 N 50000 contig no
15514931 15615797 181 FClick to retrieve finished assembled sequence in green bar: rank(s) 181 - 183 BX000523.24 1 100867 +
15615798 15780654 182 FClick to retrieve finished assembled sequence in green bar: rank(s) 181 - 183 BX248312.11 1 164857 +
15780655 15803733 183 FClick to retrieve finished assembled sequence in green bar: rank(s) 181 - 183 BX510656.7 151882 174960 +
15803734 15853733 184 N 50000 contig no
15853734 16044448 185 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 188 BX247878.5 1 190715 -
16044449 16044449 186 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 188 BX284113.5 156290 156290 -
16044450 16188967 187 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 188 CR352339.15 1 144518 -
16188968 16199831 188 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 188 BX284113.5 1 10864 -

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
44
Gap types
type-3
44
Total clones
137
Clone HTGS Phases
contiguous
3
finished
134
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
6,133,574
Total finished length of fin clones w/ overlap
19,928,635
Total finished length of fin clones w/o overlap
13,795,061
Total overlap length of fin+unfin clones
6,342,174
Total finished length of fin+unfin clones w/ overlap
20,214,417
Total finished length of fin+unfin clones w/o overlap
13,872,243

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