ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region GRC__ZEBRAFISH__ALT_DRER_TU_1__6 (TPF updated: 2017-11-23)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 CH211-165A18
alt_ctg6_1_1
zC165A18
CR847522.6
finished
2 CH211-208B16
alt_ctg6_1_1
zC208B16
BX004819.11
finished
3 CH73-104F23
alt_ctg6_1_1
zH104F23
CU928044.6
finished
  GAP (type-3) length unknown    
5 DKEY-103K8
alt_ctg6_1_2
zK103K8
BX324134.11
finished
6 DKEY-76A17
alt_ctg6_1_2
zK76A17
AL831730.18
finished
7 CH211-127M10
alt_ctg6_1_2
zC127M10
BX005290.10
finished
  GAP (type-3) length unknown    
9 CH211-181L5
alt_ctg6_1_3
zC181L5
BX663606.4
finished
10 CH211-120K2
alt_ctg6_1_3
zC120K2
BX649550.6
finished
11 CH211-241A17
alt_ctg6_1_3
zC241A17
AL953886.9
finished
  GAP (type-3) length unknown    
13 DKEY-52H23
alt_ctg6_1_4
zK52H23
CR627490.6
finished
14 CH211-139K23
alt_ctg6_1_4
zC139K23
AL772339.5
finished
15 CH211-276A17
alt_ctg6_1_4
zC276A17
CR394534.6
finished
  GAP (type-3) length unknown    
17 DKEYP-87C8
alt_ctg6_1_5
zKp87C8
CR954285.9
finished
18 CH211-121I12
alt_ctg6_1_5
zC121I12
AL935182.13
finished
19 DKEY-15G22
alt_ctg6_1_5
zK15G22
BX088724.6
finished
  GAP (type-3) length unknown    
21 CH73-17B14
alt_ctg6_1_6
zH17B14
CU652701.6
finished
22 DKEY-63M7
alt_ctg6_1_6
zK63M7
AL928556.7
finished
23 DKEYP-78G2
alt_ctg6_1_6
zKp78G2
BX323042.7
finished
  GAP (type-3) length unknown    
25 CH211-186M12
alt_ctg6_1_7
zC186M12
BX649631.8
finished
26 DKEYP-38A10
alt_ctg6_1_7
zKp38A10
CR788302.6
finished
27 CH211-285L17
alt_ctg6_1_7
zC285L17
BX942818.8
finished
  GAP (type-3) length unknown    
29 DKEY-30F11
alt_ctg6_1_8
zK30F11
CR847983.11
finished
30 CH211-87C14
alt_ctg6_1_8
zC87C14
CR388089.8
finished
31 DKEYP-53F11
alt_ctg6_1_8
zKp53F11
CR956400.10
finished
  GAP (type-3) length unknown    
33 DKEY-253F15
alt_ctg6_1_9
zK253F15
CR759922.6
finished
34 DKEYP-2F4
alt_ctg6_1_9
zKp2F4
CR847859.13
finished
35 CH211-263J13
alt_ctg6_1_9
zC263J13
BX546475.20
finished
36 CH1073-436K22
alt_ctg6_1_9
zFD436K22
FO082032.14
finished
  GAP (type-3) length unknown    
38 DKEY-48O4
alt_ctg6_1_10
zK48O4
CR847830.6
finished
39 RP71-87M8
alt_ctg6_1_10
bZ87M8
BX571897.12
finished
40 DKEY-6F24
alt_ctg6_1_10
zK6F24
CR376761.20
finished
  GAP (type-3) length unknown    
42 DKEYP-56B7
alt_ctg6_1_11
zKp56B7
BX321894.8
finished
43 DKEY-235F19
alt_ctg6_1_11
zK235F19
BX005307.12
finished
44 CH211-203N19
alt_ctg6_1_11
zC203N19
BX950169.13
finished
45 DKEY-91F15
alt_ctg6_1_11
zK91F15
BX005391.9
finished
  GAP (type-3) length unknown    
47 DKEY-8L19
alt_ctg6_1_12
CONTAINER
zK8L19
BX936378.12
finished
48 DKEY-217C5
alt_ctg6_1_12
CONTAINED
zK217C5
CT583707.6
finished
47 DKEY-8L19
alt_ctg6_1_12
CONTAINER
zK8L19
BX936378.12
finished
  GAP (type-3) length unknown    
50 DKEY-188N1
alt_ctg6_1_13
zK188N1
CR847536.5
finished
51 DKEY-45J13
alt_ctg6_1_13
zK45J13
BX005311.8
finished
52 DKEY-29O15
alt_ctg6_1_13
zK29O15
BX004829.12
finished
53 DKEY-45D16
alt_ctg6_1_13
zK45D16
BX537277.15
finished
  GAP (type-3) length unknown    
55 DKEY-237I9
alt_ctg6_1_14
zK237I9
BX005286.6
finished
56 DKEY-210O7
alt_ctg6_1_14
zK210O7
BX571728.14
finished
57 DKEY-31G6
alt_ctg6_1_14
zK31G6
CR854963.9
finished
  GAP (type-3) length unknown    
59 CH73-145N13
alt_ctg6_1_15
zH145N13
CU861513.6
finished
60 DKEYP-97G3
alt_ctg6_1_15
zKp97G3
BX663498.9
finished
61 DKEY-31C18
alt_ctg6_1_15
zK31C18
BX664602.11
finished
62 DKEYP-55D11
alt_ctg6_1_15
zKp55D11
BX664627.16
finished
63 DKEY-30P18
alt_ctg6_1_15
zK30P18
BX663607.13
finished
64 DKEY-68K17
alt_ctg6_1_15
zK68K17
BX950863.8
finished
  GAP (type-3) length unknown    
66 CH211-260P11
alt_ctg6_1_16
zC260P11
CR387927.9
finished
67 DKEY-254A16
alt_ctg6_1_16
zK254A16
CR788244.9
finished
68 CH211-183E19
alt_ctg6_1_16
zC183E19
CU929170.9
finished
  GAP (type-3) length unknown    
70 CH1073-121O15
alt_ctg6_1_17
zFD121O15
CU972509.4
finished
71 DKEY-31O13
alt_ctg6_1_17
zK31O13
AL928622.9
finished
72
alt_ctg6_1_17
CABZ01001814
CABZ01001814.1
finished
  GAP (type-3) length unknown    
74 CH73-119L12
alt_ctg6_1_18
zH119L12
FO082818.8
finished
75 DKEY-20D16
alt_ctg6_1_18
zK20D16
CR354428.16
finished
76 CH211-252P3
alt_ctg6_1_18
zC252P3
BX511118.18
finished
  GAP (type-3) length unknown    
78 DKEYP-85H7
alt_ctg6_1_19
zKp85H7
BX927081.20
finished
79 CH211-284K16
alt_ctg6_1_19
zC284K16
CR855378.6
finished
80 CH211-149L13
alt_ctg6_1_19
zC149L13
AL929019.4
finished
  GAP (type-3) length unknown    
82 CH211-15L16
alt_ctg6_1_20
zC15L16
BX004768.5
finished
83 CH211-195A16
alt_ctg6_1_20
zC195A16
CR385085.10
finished
84 CH211-177H19
alt_ctg6_1_20
zC177H19
BX005463.5
finished
  GAP (type-3) length unknown    
86 CH211-128I1
alt_ctg6_1_21
zC128I1
BX950874.9
finished
87 CH211-188N23
alt_ctg6_1_21
zC188N23
BX005055.5
finished
88 CH211-278L3
alt_ctg6_1_21
zC278L3
CR381548.7
finished
  GAP (type-3) length unknown    
90 DKEY-18D1
alt_ctg6_1_22
CONTAINER
zK18D1
CU019652.27
finished
91 CH211-2A23
alt_ctg6_1_22
CONTAINED
zC2A23
AL844196.6
finished
90 DKEY-18D1
alt_ctg6_1_22
CONTAINER
zK18D1
CU019652.27
finished
  GAP (type-3) length unknown    
93 DKEY-107I22
alt_ctg6_1_23
zK107I22
CR626936.8
finished
94 DKEY-50O12
alt_ctg6_1_23
zK50O12
BX936445.8
finished
95 DKEY-16H19
alt_ctg6_1_23
zK16H19
BX936436.13
finished
96 CH211-244C20
alt_ctg6_1_23
zC244C20
CR376772.5
finished
97 DKEY-5E5
alt_ctg6_1_23
zK5E5
CU463259.13
finished
  GAP (type-3) length unknown    
99 DKEY-13D19
alt_ctg6_1_24
zK13D19
BX004773.11
finished
100 CH211-240D20
alt_ctg6_1_24
zC240D20
BX001025.23
finished
101 DKEY-20D1
alt_ctg6_1_24
zK20D1
BX548019.36
finished
102 DKEYP-116G9
alt_ctg6_1_24
zKp116G9
BX571699.11
finished
  GAP (type-3) length unknown    
104 CH211-201H21
alt_ctg6_1_25
zC201H21
AL928701.7
finished
105 DKEYP-113C4
alt_ctg6_1_25
zKp113C4
CT573398.8
finished
106 DKEY-149G8
alt_ctg6_1_25
zK149G8
AL954637.6
finished
  GAP (type-3) length unknown    
108 CH211-160M12
alt_ctg6_1_26
zC160M12
CR847898.9
finished
109 CH211-144F18
alt_ctg6_1_26
zC144F18
AL732628.18
finished
110 CH73-317L11
alt_ctg6_1_26
zH317L11
CU179662.8
finished
  GAP (type-3) length unknown    
112 CH73-367A15
alt_ctg6_1_27
zH367A15
FP236326.7
finished
113 DKEY-111C4
alt_ctg6_1_27
zK111C4
BX901950.7
finished
114 DKEY-218B7
alt_ctg6_1_27
zK218B7
BX088595.7
finished
  GAP (type-3) length unknown    
116 CH211-117E20
alt_ctg6_1_28
zC117E20
BX957307.12
finished
117 DKEY-170J7
alt_ctg6_1_28
zK170J7
CU457790.6
finished
118 DKEY-1K24
alt_ctg6_1_28
zK1K24
BX936440.20
finished
  GAP (type-3) length unknown    
120 CH211-201N5
alt_ctg6_1_29
zC201N5
AL954175.6
finished
121 DKEY-152H20
alt_ctg6_1_29
zK152H20
BX936395.9
finished
122 DKEY-11H7
alt_ctg6_1_29
zK11H7
BX663603.13
finished
  GAP (type-3) length unknown    
124 DKEY-14O4
alt_ctg6_1_30
zK14O4
CR854929.8
finished
125 CH211-156B18
alt_ctg6_1_30
zC156B18
CR628404.7
finished
126 DKEY-170G13
alt_ctg6_1_30
zK170G13
CR848680.9
finished
  GAP (type-3) length unknown    
128 CH211-113B13
alt_ctg6_1_31
zC113B13
CR394554.6
finished
129 CH211-198K18
alt_ctg6_1_31
zC198K18
CR354598.7
finished
130 DKEY-60G10
alt_ctg6_1_31
zK60G10
CR933860.7
finished
  GAP (type-3) length unknown    
132 CH211-232J20
alt_ctg6_1_32
zC232J20
CR533579.7
finished
133 DKEY-3N4
alt_ctg6_1_32
zK3N4
BX004984.6
finished
134 DKEY-87O12
alt_ctg6_1_32
zK87O12
CR855206.9
finished
  GAP (type-3) length unknown    
136 CH1073-712C19
alt_ctg6_1_33
zFD712C19
LO017918.1
contiguous
137 CH211-194A23
alt_ctg6_1_33
zC194A23
CR391980.17
finished
138 DKEY-15L7
alt_ctg6_1_33
zK15L7
BX293997.14
finished
139 DKEY-50M7
alt_ctg6_1_33
zK50M7
CR385041.16
finished
  GAP (type-3) length unknown    
141 CH211-232F6
alt_ctg6_1_34
zC232F6
CR385065.21
finished
142 CH211-208D14
alt_ctg6_1_34
zC208D14
BX119907.8
finished
143 DKEY-39O12
alt_ctg6_1_34
zK39O12
CR854912.18
finished
  GAP (type-3) length unknown    
145 DKEY-32E8
alt_ctg6_1_35
zK32E8
CT583645.6
finished
146 DKEYP-15B2
alt_ctg6_1_35
zKp15B2
BX569794.8
finished
147 DKEY-111K7
alt_ctg6_1_35
zK111K7
BX950188.10
finished
  GAP (type-3) length unknown    
149 CH73-51E11
alt_ctg6_1_36
zH51E11
LO018116.1
contiguous
150 DKEY-183M22
alt_ctg6_1_36
zK183M22
CR381602.30
finished
  GAP (type-3) length unknown    
152 DKEY-178M19
alt_ctg6_1_37
zK178M19
CR627483.7
finished
153 DKEY-83M2
alt_ctg6_1_37
zK83M2
BX664715.25
finished
154 DKEY-29G22
alt_ctg6_1_37
zK29G22
CR628341.13
finished
  GAP (type-3) length unknown    
156 CH211-4C18
alt_ctg6_1_38
zC4C18
CR847949.13
finished
157 DKEY-78N12
alt_ctg6_1_38
zK78N12
CR388371.8
finished
158 DKEYP-41G9
alt_ctg6_1_38
zKp41G9
CR936541.6
finished
  GAP (type-3) length unknown    
160 DKEYP-41G7
alt_ctg6_1_39
zKp41G7
CR847871.5
finished
161 DKEY-38N6
alt_ctg6_1_39
zK38N6
BX323816.6
finished
162 DKEY-195M11
alt_ctg6_1_39
zK195M11
CR753817.13
finished
  GAP (type-3) length unknown    
164 CH211-173N18
alt_ctg6_1_40
zC173N18
CR388364.11
finished
165 CH211-248I12
alt_ctg6_1_40
zC248I12
AL929458.7
finished
166 CH211-190B21
alt_ctg6_1_40
zC190B21
AL929200.8
finished
167 CH211-233B16
alt_ctg6_1_40
zC233B16
AL954698.9
finished
  GAP (type-3) length unknown    
169 DKEY-178O16
alt_ctg6_1_41
CONTAINER
zK178O16
CU468905.10
finished
170 CH211-213C6
alt_ctg6_1_41
CONTAINED
zC213C6
AL953852.6
finished
169 DKEY-178O16
alt_ctg6_1_41
CONTAINER
zK178O16
CU468905.10
finished
  GAP (type-3) length unknown    
172 DKEY-237J17
alt_ctg6_1_42
zK237J17
BX119974.5
finished
173 DKEY-110L7
alt_ctg6_1_42
zK110L7
BX640588.5
finished
174 CH211-2E18
alt_ctg6_1_42
zC2E18
BX000434.11
finished
  GAP (type-3) length unknown    
176 CH1073-465K3
alt_ctg6_1_43
zFD465K3
LO017892.1
contiguous
177 CH211-261F19
alt_ctg6_1_43
zC261F19
CR377214.13
finished
178 CH73-312E21
alt_ctg6_1_43
zH312E21
CT033836.8
finished
  GAP (type-3) length unknown    
180 DKEY-148L2
alt_ctg6_1_44
zK148L2
BX663614.24
finished
181 CH211-67L13
alt_ctg6_1_44
zC67L13
BX927303.11
finished
182 CH211-139G10
alt_ctg6_1_44
CONTAINER
zC139G10
BX005101.8
finished
183 CH211-154F24
alt_ctg6_1_44
CONTAINED
zC154F24
BX510310.14
finished
182 CH211-139G10
alt_ctg6_1_44
CONTAINER
zC139G10
BX005101.8
finished
  GAP (type-3) length unknown    
185 CH211-1L10
alt_ctg6_1_45
zC1L10
AL929512.14
finished
186 DKEYP-74A8
alt_ctg6_1_45
zKp74A8
BX664703.21
finished
187 DKEY-42O15
alt_ctg6_1_45
zK42O15
CR391948.7
finished
  GAP (type-3) length unknown    
189 CH211-201C19
alt_ctg6_1_46
zC201C19
AL954307.8
finished
190 DKEY-219G5
alt_ctg6_1_46
zK219G5
BX950174.16
finished
191 CH211-105J21
alt_ctg6_1_46
zC105J21
BX005150.5
finished
  GAP (type-3) length unknown    
193 DKEY-183K8
alt_ctg6_1_47
zK183K8
BX569793.13
finished
194 CH211-244I2
alt_ctg6_1_47
zC244I2
BX088541.17
finished
195 CH73-59H16
alt_ctg6_1_47
zH59H16
FP017253.8
finished
  GAP (type-3) length unknown    
197 DKEYP-27C11
alt_ctg6_1_48
zKp27C11
BX323459.20
finished
198 CH211-148N10
alt_ctg6_1_48
zC148N10
BX649626.14
finished
199 CH1073-298I18
alt_ctg6_1_48
zFD298I18
CU467627.6
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 60470 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CR847522.6 5635 66104 -
60471 295334 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX004819.11 1 234864 -
295335 326983 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CU928044.6 20180 51828 +
326984 376983 4 N 50000 contig no
376984 557185 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 BX324134.11 39313 219514 -
557186 716815 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 AL831730.18 1 159630 -
716816 879405 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 BX005290.10 1 162590 -
879406 929405 8 N 50000 contig no
929406 937496 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 BX663606.4 91857 99947 -
937497 1107843 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 BX649550.6 1 170347 -
1107844 1188401 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 AL953886.9 1 80558 -
1188402 1238401 12 N 50000 contig no
1238402 1273617 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 CR627490.6 28778 63993 -
1273618 1439516 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 AL772339.5 911 166809 -
1439517 1482578 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 CR394534.6 110309 153370 +
1482579 1532578 16 N 50000 contig no
1532579 1591127 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 19 CR954285.9 1 58549 +
1591128 1777172 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 19 AL935182.13 1 186045 -
1777173 1835232 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 19 BX088724.6 1 58060 -
1835233 1885232 20 N 50000 contig no
1885233 1923465 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 23 CU652701.6 1 38233 +
1923466 2119869 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 23 AL928556.7 1 196404 -
2119870 2135183 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 23 BX323042.7 1 15314 -
2135184 2185183 24 N 50000 contig no
2185184 2343426 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 BX649631.8 10113 168355 -
2343427 2515806 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 CR788302.6 322 172701 +
2515807 2556163 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 BX942818.8 1 40357 -
2556164 2606163 28 N 50000 contig no
2606164 2762357 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CR847983.11 42918 199111 -
2762358 2928165 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CR388089.8 1 165808 -
2928166 3067305 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CR956400.10 34650 173789 +
3067306 3117305 32 N 50000 contig no
3117306 3145167 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 36 CR759922.6 18646 46507 -
3145168 3270004 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 36 CR847859.13 1 124837 +
3270005 3410162 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 36 BX546475.20 2001 142158 +
3410163 3445476 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 36 FO082032.14 1 35314 -
3445477 3495476 37 N 50000 contig no
3495477 3531448 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 40 CR847830.6 1 35972 +
3531449 3680863 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 40 BX571897.12 1 149415 -
3680864 3736044 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 40 CR376761.20 115465 170645 +
3736045 3786044 41 N 50000 contig no
3786045 3889173 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 42 - 45 BX321894.8 78661 181789 -
3889174 4089635 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 42 - 45 BX005307.12 1 200462 -
4089636 4220722 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 42 - 45 BX950169.13 23380 154466 +
4220723 4240679 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 42 - 45 BX005391.9 142676 162632 +
4240680 4290679 46 N 50000 contig no
4290680 4306571 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 49 BX936378.12 1 15892 +
4306572 4454408 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 49 CT583707.6 2 147838 +
4454409 4476504 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 49 BX936378.12 152557 174652 +
4476505 4526504 50 N 50000 contig no
4526505 4558665 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 54 CR847536.5 1 32161 +
4558666 4599116 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 54 BX005311.8 1 40451 +
4599117 4828697 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 54 BX004829.12 2001 231581 +
4828698 5082502 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 54 BX537277.15 9210 263014 +
5082503 5132502 55 N 50000 contig no
5132503 5224363 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 58 BX005286.6 1 91861 +
5224364 5453422 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 58 BX571728.14 1 229059 +
5453423 5460214 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 56 - 58 CR854963.9 1 6792 -
5460215 5510214 59 N 50000 contig no
5510215 5552238 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 65 CU861513.6 1 42024 +
5552239 5716567 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 65 BX663498.9 2 164330 +
5716568 5886065 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 65 BX664602.11 2001 171498 +
5886066 6090473 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 65 BX664627.16 2001 206408 +
6090474 6269687 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 65 BX663607.13 36855 216068 +
6269688 6320077 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 65 BX950863.8 2001 52390 +
6320078 6370077 66 N 50000 contig no
6370078 6494661 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 CR387927.9 1 124584 +
6494662 6702786 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 CR788244.9 1 208125 +
6702787 6798692 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 CU929170.9 75898 171803 +
6798693 6848692 70 N 50000 contig no
6848693 6853504 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 73 CU972509.4 1 4812 +
6853505 7084061 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 73 AL928622.9 1 230557 +
7084062 7086938 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 73 CABZ01001814.1 15993 18869 +
7086939 7136938 74 N 50000 contig no
7136939 7170825 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 77 FO082818.8 1 33887 +
7170826 7385219 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 77 CR354428.16 1 214394 +
7385220 7453825 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 77 BX511118.18 47301 115906 +
7453826 7503825 78 N 50000 contig no
7503826 7628231 79 FClick to retrieve finished assembled sequence in green bar: rank(s) 79 - 81 BX927081.20 13345 137750 -
7628232 7779785 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 79 - 81 CR855378.6 1 151554 +
7779786 7788544 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 79 - 81 AL929019.4 1 8759 -
7788545 7838544 82 N 50000 contig no
7838545 7977045 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 85 BX004768.5 1 138501 +
7977046 8188104 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 85 CR385085.10 2 211060 +
8188105 8189467 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 85 BX005463.5 1 1363 -
8189468 8239467 86 N 50000 contig no
8239468 8366982 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 89 BX950874.9 49600 177114 -
8366983 8522697 88 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 89 BX005055.5 1 155715 -
8522698 8613622 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 89 CR381548.7 1 90925 -
8613623 8663622 90 N 50000 contig no
8663623 8679329 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 93 CU019652.27 234679 250385 -
8679330 8850470 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 93 AL844196.6 1 171141 +
8850471 8911325 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 93 CU019652.27 1 60855 -
8911326 8961325 94 N 50000 contig no
8961326 8985411 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 99 CR626936.8 51715 75800 -
8985412 9149131 96 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 99 BX936445.8 1 163720 +
9149132 9347565 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 99 BX936436.13 2001 200434 +
9347566 9513248 98 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 99 CR376772.5 1 165683 -
9513249 9581746 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 99 CU463259.13 2737 71234 +
9581747 9631746 100 N 50000 contig no
9631747 9829741 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 104 BX004773.11 1 197995 +
9829742 10009216 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 104 BX001025.23 1 179475 -
10009217 10174069 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 104 BX548019.36 1 164853 -
10174070 10209247 104 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 104 BX571699.11 46327 81504 +
10209248 10259247 105 N 50000 contig no
10259248 10445992 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 108 AL928701.7 1 186745 +
10445993 10580203 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 108 CT573398.8 1 134211 -
10580204 10655392 108 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 108 AL954637.6 86679 161867 +
10655393 10705392 109 N 50000 contig no
10705393 10841857 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 110 - 112 CR847898.9 1 136465 +
10841858 10966410 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 110 - 112 AL732628.18 49578 174130 +
10966411 11033709 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 110 - 112 CU179662.8 18724 86022 +
11033710 11083709 113 N 50000 contig no
11083710 11091728 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 114 - 116 FP236326.7 1 8019 +
11091729 11237771 115 FClick to retrieve finished assembled sequence in green bar: rank(s) 114 - 116 BX901950.7 1 146043 +
11237772 11335975 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 114 - 116 BX088595.7 1 98204 -
11335976 11385975 117 N 50000 contig no
11385976 11529184 118 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 120 BX957307.12 1 143209 +
11529185 11693681 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 120 CU457790.6 1 164497 -
11693682 11885507 120 FClick to retrieve finished assembled sequence in green bar: rank(s) 118 - 120 BX936440.20 1 191826 -
11885508 11935507 121 N 50000 contig no
11935508 12037453 122 FClick to retrieve finished assembled sequence in green bar: rank(s) 122 - 124 AL954175.6 1 101946 +
12037454 12171210 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 122 - 124 BX936395.9 10 133766 +
12171211 12271605 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 122 - 124 BX663603.13 91723 192117 +
12271606 12321605 125 N 50000 contig no
12321606 12396039 126 FClick to retrieve finished assembled sequence in green bar: rank(s) 126 - 128 CR854929.8 1 74434 -
12396040 12562785 127 FClick to retrieve finished assembled sequence in green bar: rank(s) 126 - 128 CR628404.7 1 166746 -
12562786 12588703 128 FClick to retrieve finished assembled sequence in green bar: rank(s) 126 - 128 CR848680.9 1 25918 -
12588704 12638703 129 N 50000 contig no
12638704 12789319 130 FClick to retrieve finished assembled sequence in green bar: rank(s) 130 - 132 CR394554.6 18378 168993 -
12789320 12979756 131 FClick to retrieve finished assembled sequence in green bar: rank(s) 130 - 132 CR354598.7 1 190437 -
12979757 12980430 132 FClick to retrieve finished assembled sequence in green bar: rank(s) 130 - 132 CR933860.7 1 674 -
12980431 13030430 133 N 50000 contig no
13030431 13084058 134 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 136 CR533579.7 145700 199327 -
13084059 13348796 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 136 BX004984.6 1 264738 -
13348797 13399920 136 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 136 CR855206.9 1 51124 -
13399921 13449920 137 N 50000 contig no
13449921 13471031 138 A LO017918.1 1 21111 +
13471032 13636733 139 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 141 CR391980.17 1 165702 -
13636734 13868392 140 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 141 BX293997.14 1 231659 -
13868393 14008281 141 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 141 CR385041.16 51545 191433 +
14008282 14058281 142 N 50000 contig no
14058282 14096722 143 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 145 CR385065.21 1 38441 +
14096723 14277782 144 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 145 BX119907.8 1 181060 -
14277783 14409941 145 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 145 CR854912.18 37909 170067 +
14409942 14459941 146 N 50000 contig no
14459942 14488391 147 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 149 CT583645.6 8866 37315 -
14488392 14650776 148 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 149 BX569794.8 4 162388 +
14650777 14823701 149 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 149 BX950188.10 1 172925 -
14823702 14873701 150 N 50000 contig no
14873702 14954355 151 A LO018116.1 1 80654 +
14954356 15146491 152 FClick to retrieve finished assembled sequence in green bar: rank(s) 152 - 152 CR381602.30 1 192136 +
15146492 15196491 153 N 50000 contig no
15196492 15220412 154 FClick to retrieve finished assembled sequence in green bar: rank(s) 154 - 156 CR627483.7 1 23921 +
15220413 15448731 155 FClick to retrieve finished assembled sequence in green bar: rank(s) 154 - 156 BX664715.25 1 228319 +
15448732 15686575 156 FClick to retrieve finished assembled sequence in green bar: rank(s) 154 - 156 CR628341.13 8322 246165 +
15686576 15736575 157 N 50000 contig no
15736576 15778063 158 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 160 CR847949.13 1 41488 +
15778064 15963941 159 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 160 CR388371.8 1 185878 -
15963942 15967380 160 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 160 CR936541.6 75873 79311 +
15967381 16017380 161 N 50000 contig no
16017381 16060896 162 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 CR847871.5 1 43516 +
16060897 16251428 163 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 BX323816.6 1 190532 -
16251429 16314932 164 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 CR753817.13 173234 236737 +
16314933 16364932 165 N 50000 contig no
16364933 16427163 166 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 169 CR388364.11 1 62231 +
16427164 16564641 167 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 169 AL929458.7 1 137478 -
16564642 16683322 168 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 169 AL929200.8 2 118682 -
16683323 16763362 169 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 169 AL954698.9 1 80040 -
16763363 16813362 170 N 50000 contig no
16813363 16865003 171 FClick to retrieve finished assembled sequence in green bar: rank(s) 171 - 173 CU468905.10 1 51641 +
16865004 17065885 172 FClick to retrieve finished assembled sequence in green bar: rank(s) 171 - 173 AL953852.6 1 200882 -
17065886 17094226 173 FClick to retrieve finished assembled sequence in green bar: rank(s) 171 - 173 CU468905.10 242704 271044 +
17094227 17144226 174 N 50000 contig no
17144227 17262282 175 FClick to retrieve finished assembled sequence in green bar: rank(s) 175 - 177 BX119974.5 1 118056 +
17262283 17379788 176 FClick to retrieve finished assembled sequence in green bar: rank(s) 175 - 177 BX640588.5 1 117506 +
17379789 17546851 177 FClick to retrieve finished assembled sequence in green bar: rank(s) 175 - 177 BX000434.11 1 167063 -
17546852 17596851 178 N 50000 contig no
17596852 17623998 179 A LO017892.1 1 27147 +
17623999 17805633 180 FClick to retrieve finished assembled sequence in green bar: rank(s) 180 - 181 CR377214.13 1 181635 +
17805634 17850058 181 FClick to retrieve finished assembled sequence in green bar: rank(s) 180 - 181 CT033836.8 16080 60504 +
17850059 17900058 182 N 50000 contig no
17900059 18049378 183 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 187 BX663614.24 1 149320 +
18049379 18212758 184 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 187 BX927303.11 1 163380 -
18212759 18214716 185 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 187 BX005101.8 89246 91203 +
18214717 18232979 186 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 187 BX510310.14 898 19160 -
18232980 18295085 187 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 187 BX005101.8 98619 160724 +
18295086 18345085 188 N 50000 contig no
18345086 18376776 189 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 191 AL929512.14 1 31691 +
18376777 18570504 190 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 191 BX664703.21 229 193956 -
18570505 18674817 191 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 191 CR391948.7 1 104313 -
18674818 18724817 192 N 50000 contig no
18724818 18842799 193 FClick to retrieve finished assembled sequence in green bar: rank(s) 193 - 195 AL954307.8 1 117982 +
18842800 19012968 194 FClick to retrieve finished assembled sequence in green bar: rank(s) 193 - 195 BX950174.16 1 170169 +
19012969 19020052 195 FClick to retrieve finished assembled sequence in green bar: rank(s) 193 - 195 BX005150.5 1 7084 -
19020053 19070052 196 N 50000 contig no
19070053 19104039 197 FClick to retrieve finished assembled sequence in green bar: rank(s) 197 - 199 BX569793.13 94376 128362 -
19104040 19218932 198 FClick to retrieve finished assembled sequence in green bar: rank(s) 197 - 199 BX088541.17 1 114893 +
19218933 19300648 199 FClick to retrieve finished assembled sequence in green bar: rank(s) 197 - 199 FP017253.8 1 81716 -
19300649 19350648 200 N 50000 contig no
19350649 19383137 201 FClick to retrieve finished assembled sequence in green bar: rank(s) 201 - 203 BX323459.20 136050 168538 -
19383138 19543242 202 FClick to retrieve finished assembled sequence in green bar: rank(s) 201 - 203 BX649626.14 1 160105 -
19543243 19568329 203 FClick to retrieve finished assembled sequence in green bar: rank(s) 201 - 203 CU467627.6 10378 35464 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
47
Gap types
type-3
47
Total clones
152
Clone HTGS Phases
contiguous
3
finished
149
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
6,027,376
Total finished length of fin clones w/ overlap
22,987,058
Total finished length of fin clones w/o overlap
16,959,682
Total overlap length of fin+unfin clones
6,107,475
Total finished length of fin+unfin clones w/ overlap
23,196,069
Total finished length of fin+unfin clones w/o overlap
17,088,594

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