ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region GRC__ZEBRAFISH__ALT_DRER_TU_1__1 (TPF updated: 2018-01-16)

TPF

Help

# Clone ext/Contig Clone int Acc/Fin
1 CH211-160D14
alt_ctg1_1_1
zC160D14
EPN details
AL928650.5
finished
2 DKEY-190M16
alt_ctg1_1_1
zK190M16
EPN details
BX649405.13
finished
3 DKEY-20I6
alt_ctg1_1_1
zK20I6
EPN details
BX005261.9
finished
  GAP (type-3) length unknown    
5 CH73-49M18
alt_ctg1_1_2
zH49M18
EPN details
CT573178.6
finished
6 DKEY-115H20
alt_ctg1_1_2
zK115H20
EPN details
BX901897.6
finished
7 CH211-212D2
alt_ctg1_1_2
zC212D2
EPN details
BX901912.10
finished
8 DKEYP-57D7
alt_ctg1_1_2
zKp57D7
EPN details
BX323038.3
finished
  GAP (type-3) length unknown    
10 CH211-243G6
alt_ctg1_1_3
zC243G6
EPN details
AL935188.7
finished
11 CH211-226D23
alt_ctg1_1_3
zC226D23
EPN details
BX088528.7
finished
12 DKEY-31E10
alt_ctg1_1_3
zK31E10
EPN details
AL953910.14
finished
  GAP (type-3) length unknown    
14 CH211-59A4
alt_ctg1_1_4
zC59A4
EPN details
BX004756.8
finished
15 DKEY-111N6
alt_ctg1_1_4
zK111N6
EPN details
BX537262.7
finished
16 RP71-86K19
alt_ctg1_1_4
bZ86K19
EPN details
BX323995.14
finished
  GAP (type-3) length unknown    
18 CH211-109N19
alt_ctg1_1_5
zC109N19
EPN details
CT033816.7
finished
19 DKEY-216J12
alt_ctg1_1_5
Cl/Pr zK216J12/zK253J12 swap
EPN details
BX247866.12
finished
20 DKEYP-59G7
alt_ctg1_1_5
zKp59G7
EPN details
BX511261.13
finished
  GAP (type-3) length unknown    
22 DKEY-41G3
alt_ctg1_1_6
zK41G3
EPN details
BX511211.6
finished
23 DKEY-240B22
alt_ctg1_1_6
zK240B22
EPN details
BX511162.8
finished
  GAP (type-3) length unknown    
25 CH211-226D6
alt_ctg1_1_7
CONTAINER
zC226D6
EPN details
CR847936.11
finished
26 DKEY-12L8
alt_ctg1_1_7
CONTAINED
zK12L8
EPN details
BX000435.21
finished
25 CH211-226D6
alt_ctg1_1_7
CONTAINER
zC226D6
EPN details
CR847936.11
finished
  GAP (type-3) length unknown    
28 DKEY-228H18
alt_ctg1_1_8
zK228H18
EPN details
CU138548.14
finished
29 DKEY-247I12
alt_ctg1_1_8
zK247I12
EPN details
BX649383.4
finished
30 CH211-135M11
alt_ctg1_1_8
zC135M11
EPN details
CT573272.8
finished
  GAP (type-3) length unknown    
32 DKEY-109M11
alt_ctg1_1_9
zK109M11
EPN details
BX927112.17
finished
33 CH211-1B13
alt_ctg1_1_9
zC1B13
EPN details
BX927415.8
finished
34 CH211-226M23
alt_ctg1_1_9
zC226M23
EPN details
AL935291.6
finished
  GAP (type-3) length unknown    
36 DKEY-279E10
alt_ctg1_1_10
zK279E10
EPN details
CR377220.10
finished
37 DKEY-245E14
alt_ctg1_1_10
zK245E14
EPN details
BX539315.5
finished
38 CH211-231B2
alt_ctg1_1_10
zC231B2
EPN details
BX927393.12
finished
  GAP (type-3) length unknown    
40 CH211-194C21
alt_ctg1_1_11
zC194C21
EPN details
BX511093.3
finished
41 DKEY-29D16
alt_ctg1_1_11
zK29D16
EPN details
BX323008.5
finished
42 DKEY-228C11
alt_ctg1_1_11
zK228C11
EPN details
BX537280.12
finished
  GAP (type-3) length unknown    
44 DKEY-256E7
alt_ctg1_1_12
zK256E7
EPN details
CR759951.21
finished
45 DKEY-28C2
alt_ctg1_1_12
zK28C2
EPN details
BX950183.9
finished
46 DKEYP-11A2
alt_ctg1_1_12
zKp11A2
EPN details
CR774194.4
finished
  GAP (type-3) length unknown    
48 DKEY-197M24
alt_ctg1_1_13
zK197M24
EPN details
CR391953.15
finished
49 CH211-65M8
alt_ctg1_1_13
zC65M8
EPN details
BX927285.6
finished
50 CH211-142E15
alt_ctg1_1_13
zC142E15
EPN details
AL929210.4
finished
  GAP (type-3) length unknown    
52 DKEY-13D23
alt_ctg1_1_14
zK13D23
EPN details
CR762406.12
finished
53 DKEY-8L3
alt_ctg1_1_14
zK8L3
EPN details
CU457781.9
finished
54 CH211-285M21
alt_ctg1_1_14
zC285M21
EPN details
BX323883.14
finished
  GAP (type-3) length unknown    
56 DKEY-245P14
alt_ctg1_1_15
zK245P14
EPN details
BX548248.10
finished
57 CH211-155G22
alt_ctg1_1_15
zC155G22
EPN details
BX001036.13
finished
58 CH211-42I9
alt_ctg1_1_15
zC42I9
EPN details
BX323590.9
finished
  GAP (type-3) length unknown    
60 DKEY-82J4
alt_ctg1_1_16
zK82J4
EPN details
CR387920.13
finished
61 CH211-201G8
alt_ctg1_1_16
zC201G8
EPN details
BX119979.9
finished
62 CH211-152J23
alt_ctg1_1_16
zC152J23
EPN details
BX511095.9
finished
  GAP (type-3) length unknown    
64 DKEY-285B22
alt_ctg1_1_17
zK285B22
EPN details
CT573182.6
finished
65 DKEY-75G19
alt_ctg1_1_17
zK75G19
EPN details
CR762472.6
finished
66 CH211-287C11
alt_ctg1_1_17
zC287C11
EPN details
BX323083.29
finished
  GAP (type-3) length unknown    
68 DKEY-253I9
alt_ctg1_1_18
zK253I9
EPN details
CR762427.15
finished
69 DKEY-40A23
alt_ctg1_1_18
zK40A23
EPN details
CR769783.10
finished
70 CH73-61K13
alt_ctg1_1_18
zH61K13
EPN details
CT573191.7
finished
  GAP (type-3) length unknown    
72 CH73-280L8
alt_ctg1_1_19
zH280L8
EPN details
CU075714.6
finished
73 DKEY-221H2
alt_ctg1_1_19
zK221H2
EPN details
BX005212.7
finished
74 CH211-280H4
alt_ctg1_1_19
zC280H4
EPN details
CR786570.9
finished
  GAP (type-3) length unknown    
76 CH73-173K21
alt_ctg1_1_20
zH173K21
EPN details
CU468286.4
finished
77 CH211-220F6
alt_ctg1_1_20
zC220F6
EPN details
AL807739.6
finished
78 CH73-60M14
alt_ctg1_1_20
zH60M14
EPN details
FO704616.2
contiguous
  GAP (type-3) length unknown    
80 CH73-207I17
alt_ctg1_1_21
zH207I17
EPN details
FP245458.6
finished
81 CH211-101B14
alt_ctg1_1_21
zC101B14
EPN details
AL929074.5
finished
82 DKEY-92J12
alt_ctg1_1_21
zK92J12
EPN details
BX908795.10
finished
  GAP (type-3) length unknown    
84 DKEY-274K22
alt_ctg1_1_22
zK274K22
EPN details
CR759875.6
finished
85 DKEY-97I21
alt_ctg1_1_22
zK97I21
EPN details
CR388402.15
finished
86 DKEYP-26A9
alt_ctg1_1_22
zKp26A9
EPN details
CR391911.15
finished
  GAP (type-3) length unknown    
88 DKEY-237H21
alt_ctg1_1_23
zK237H21
EPN details
BX855591.11
finished
89 CH211-182L2
alt_ctg1_1_23
zC182L2
EPN details
CR354380.7
finished
90 DKEY-40H17
alt_ctg1_1_23
zK40H17
EPN details
BX005068.13
finished
  GAP (type-3) length unknown    
92 CH211-150A22
alt_ctg1_1_24
zC150A22
EPN details
AL772332.6
finished
93 DKEY-160I7
alt_ctg1_1_24
zK160I7
EPN details
CR376771.10
finished
94 DKEY-210H10
alt_ctg1_1_24
zK210H10
EPN details
CR847499.12
finished
95 CH211-87B12
alt_ctg1_1_24
zC87B12
EPN details
CR381538.9
finished
96 DKEY-104E13
alt_ctg1_1_24
zK104E13
EPN details
BX005016.8
finished
  GAP (type-3) length unknown    
98 CH211-62K15
alt_ctg1_1_25
zC62K15
EPN details
BX950209.14
finished
99 DKEY-237I1
alt_ctg1_1_25
zK237I1
EPN details
BX005365.16
finished
100 CH211-275D2
alt_ctg1_1_25
zC275D2
EPN details
BX255954.13
finished
101 CH73-34B5
alt_ctg1_1_25
zH34B5
EPN details
CU571168.4
finished
  GAP (type-3) length unknown    
103 CH211-2I17
alt_ctg1_1_26
zC2I17
EPN details
BX936299.14
finished
104 DKEY-200F3
alt_ctg1_1_26
zK200F3
EPN details
BX649333.9
finished
105 DKEY-114F6
alt_ctg1_1_26
zK114F6
EPN details
BX000462.10
finished
  GAP (type-3) length unknown    
107 CH211-127N13
alt_ctg1_1_27
zC127N13
EPN details
CT573253.10
finished
108 DKEY-97O8
alt_ctg1_1_27
zK97O8
EPN details
CR391917.19
finished
109 DKEY-29D5
alt_ctg1_1_27
zK29D5
EPN details
AL974309.17
finished
  GAP (type-3) length unknown    
111 DKEY-281I15
alt_ctg1_1_28
zK281I15
EPN details
BX571828.6
finished
112 DKEY-97M4
alt_ctg1_1_28
zK97M4
EPN details
BX908760.8
finished
113 CH73-77J21
alt_ctg1_1_28
zH77J21
EPN details
CU915565.7
finished
  GAP (type-3) length unknown    
115 CH73-98J8
alt_ctg1_1_29
zH98J8
EPN details
CU570895.8
finished
116 CH211-101L11
alt_ctg1_1_29
zC101L11
EPN details
BX950201.12
finished
  GAP (type-3) length unknown    
118 DKEY-1H24
alt_ctg1_1_30
CONTAINER
zK1H24
EPN details
BX005426.17
finished
119 CH211-159J13
alt_ctg1_1_30
CONTAINED
zC159J13
EPN details
AL929045.7
finished
118 DKEY-1H24
alt_ctg1_1_30
CONTAINER
zK1H24
EPN details
BX005426.17
finished
  GAP (type-3) length unknown    
121 DKEY-256M19
alt_ctg1_1_31
zK256M19
EPN details
BX088652.6
finished
122 DKEY-262O12
alt_ctg1_1_31
zK262O12
EPN details
CR762396.8
finished
123 CH73-115F13
alt_ctg1_1_31
zH115F13
EPN details
CU468285.5
finished
  GAP (type-3) length unknown    
125 CH211-236L15
alt_ctg1_1_32
zC236L15
EPN details
BX255890.6
finished
126 DKEY-24B15
alt_ctg1_1_32
zK24B15
EPN details
BX088533.9
finished
127 DKEY-22O12
alt_ctg1_1_32
zK22O12
EPN details
CR382370.13
finished
  GAP (type-3) length unknown    
129 CH211-103L6
alt_ctg1_1_33
zC103L6
EPN details
BX004885.5
finished
130 CH211-275N22
alt_ctg1_1_33
zC275N22
EPN details
CR391926.10
finished
131 CH211-141I4
alt_ctg1_1_33
zC141I4
EPN details
CR407598.25
finished
  GAP (type-3) length unknown    
133 DKEY-18J14
alt_ctg1_1_34
zK18J14
EPN details
BX548015.16
finished
134 CH211-82E18
alt_ctg1_1_34
zC82E18
EPN details
CR388054.11
finished
135 DKEY-7M11
alt_ctg1_1_34
zK7M11
EPN details
BX284697.8
finished
  GAP (type-3) length unknown    
137 CH211-271L9
alt_ctg1_1_35
zC271L9
EPN details
CT990606.13
finished
138 CH211-238F11
alt_ctg1_1_35
zC238F11
EPN details
BX248508.10
finished
139 DKEY-6O1
alt_ctg1_1_35
zK6O1
EPN details
CR925879.21
finished
  GAP (type-3) length unknown    
141 CH211-184N9
alt_ctg1_1_36
zC184N9
EPN details
CR392035.10
finished
142 CH211-196D9
alt_ctg1_1_36
zC196D9
EPN details
AL935173.9
finished
143 CH211-247C17
alt_ctg1_1_36
zC247C17
EPN details
CR536615.10
finished
  GAP (type-3) length unknown    
145 DKEY-180K21
alt_ctg1_1_37
zK180K21
EPN details
CR848003.7
finished
146 DKEY-244H24
alt_ctg1_1_37
zK244H24
EPN details
CR788257.9
finished
147 DKEY-222F1
alt_ctg1_1_37
zK222F1
EPN details
CR749750.9
finished
  GAP (type-3) length unknown    
149 DKEY-27H10
alt_ctg1_1_38
zK27H10
EPN details
BX322570.4
finished
150 DKEY-218L17
alt_ctg1_1_38
zK218L17
EPN details
AL844217.7
finished
151 CH211-194G2
alt_ctg1_1_38
zC194G2
EPN details
BX276105.6
finished
  GAP (type-3) length unknown    
153 CH211-103C14
alt_ctg1_1_39
zC103C14
EPN details
AL928968.7
finished
154 CH211-172J10
alt_ctg1_1_39
zC172J10
EPN details
CR762429.11
finished
  GAP (type-3) length unknown    
156 DKEYP-14G8
alt_ctg1_1_40
zKp14G8
EPN details
BX511149.9
finished
157 CH211-189L17
alt_ctg1_1_40
zC189L17
EPN details
CR388021.9
finished
158 CH73-273B10
alt_ctg1_1_40
zH273B10
EPN details
FP245442.5
finished
  GAP (type-3) length unknown    
160 DKEY-117M1
alt_ctg1_1_41
zK117M1
EPN details
CT737206.10
finished
161 CH211-193D9
alt_ctg1_1_41
zC193D9
EPN details
BX548026.10
finished
162 CH211-113E8
alt_ctg1_1_41
zC113E8
EPN details
AL953865.9
finished
  GAP (type-3) length unknown    
164 DKEY-234K24
alt_ctg1_1_42
zK234K24
EPN details
CR387992.11
finished
165 CH211-140C16
alt_ctg1_1_42
zC140C16
EPN details
CR407571.9
finished
166 CH211-188M17
alt_ctg1_1_42
zC188M17
EPN details
AL929576.7
finished
  GAP (type-3) length unknown    
168 DKEY-251I8
alt_ctg1_1_43
zK251I8
EPN details
AL954317.8
finished
169 DKEY-197I9
alt_ctg1_1_43
zK197I9
EPN details
CU179663.6
finished
170 DKEY-263L8
alt_ctg1_1_43
zK263L8
EPN details
BX465849.10
finished
  GAP (type-3) length unknown    
172 CH211-188P14
alt_ctg1_1_44
CONTAINER
zC188P14
EPN details
FP236157.11
finished
173 RP71-1O24
alt_ctg1_1_44
CONTAINED
bZ1O24
EPN details
AL627423.27
finished
172 CH211-188P14
alt_ctg1_1_44
CONTAINER
zC188P14
EPN details
FP236157.11
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 19618 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AL928650.5 1 19618 +
19619 250938 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX649405.13 1 231320 +
250939 306771 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX005261.9 124051 179883 +
306772 356771 4 N 50000 contig no
356772 393540 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 8 CT573178.6 32697 69465 -
393541 574519 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 8 BX901897.6 1 180979 -
574520 712808 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 8 BX901912.10 1 138289 -
712809 744331 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 8 BX323038.3 1 31523 -
744332 794331 9 N 50000 contig no
794332 945982 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 12 AL935188.7 9296 160946 -
945983 1117600 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 12 BX088528.7 1 171618 -
1117601 1145431 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 12 AL953910.14 1 27831 -
1145432 1195431 13 N 50000 contig no
1195432 1262341 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 14 - 16 BX004756.8 1 66910 +
1262342 1359376 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 14 - 16 BX537262.7 1 97035 +
1359377 1462215 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 14 - 16 BX323995.14 1 102839 -
1462216 1512215 17 N 50000 contig no
1512216 1658715 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 18 - 20 CT033816.7 1 146500 +
1658716 1773198 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 18 - 20 BX247866.12 15829 130311 -
1773199 1833927 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 18 - 20 BX511261.13 93492 154220 +
1833928 1883927 21 N 50000 contig no
1883928 2073110 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 23 BX511211.6 1 189183 +
2073111 2192722 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 22 - 23 BX511162.8 1 119612 +
2192723 2242722 24 N 50000 contig no
2242723 2249668 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 CR847936.11 1 6946 +
2249669 2357733 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 BX000435.21 93609 201673 -
2357734 2439431 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 27 CR847936.11 121592 203289 +
2439432 2489431 28 N 50000 contig no
2489432 2592118 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CU138548.14 1 102687 +
2592119 2781284 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 BX649383.4 1 189166 -
2781285 2840996 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CT573272.8 48689 108400 +
2840997 2890996 32 N 50000 contig no
2890997 2975378 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 35 BX927112.17 1 84382 +
2975379 3178259 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 35 BX927415.8 1 202881 +
3178260 3186698 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 35 AL935291.6 1 8439 -
3186699 3236698 36 N 50000 contig no
3236699 3362180 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 39 CR377220.10 43531 169012 -
3362181 3533741 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 39 BX539315.5 579 172139 +
3533742 3611026 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 39 BX927393.12 1 77285 -
3611027 3661026 40 N 50000 contig no
3661027 3726328 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 43 BX511093.3 1 65302 +
3726329 3937733 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 43 BX323008.5 5443 216847 +
3937734 4074598 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 43 BX537280.12 26287 163151 +
4074599 4124598 44 N 50000 contig no
4124599 4137145 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 47 CR759951.21 1 12547 +
4137146 4334691 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 47 BX950183.9 2634 200179 -
4334692 4399756 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 47 CR774194.4 95056 160120 +
4399757 4449756 48 N 50000 contig no
4449757 4500839 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 51 CR391953.15 1 51083 +
4500840 4683934 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 51 BX927285.6 1 183095 -
4683935 4748055 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 51 AL929210.4 1 64121 -
4748056 4798055 52 N 50000 contig no
4798056 4905715 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 CR762406.12 1 107660 +
4905716 5099004 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 CU457781.9 1 193289 -
5099005 5238201 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 55 BX323883.14 56054 195250 +
5238202 5288201 56 N 50000 contig no
5288202 5459839 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 59 BX548248.10 1 171638 +
5459840 5483528 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 59 BX001036.13 1 23689 +
5483529 5646158 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 59 BX323590.9 1 162630 +
5646159 5696158 60 N 50000 contig no
5696159 5765106 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 63 CR387920.13 1 68948 +
5765107 5954409 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 63 BX119979.9 1 189303 +
5954410 6106372 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 63 BX511095.9 406 152368 +
6106373 6156372 64 N 50000 contig no
6156373 6178300 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 CT573182.6 1 21928 +
6178301 6354772 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 CR762472.6 1 176472 -
6354773 6528864 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 BX323083.29 1 174092 -
6528865 6578864 68 N 50000 contig no
6578865 6584422 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 71 CR762427.15 1 5558 +
6584423 6806457 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 71 CR769783.10 1 222035 -
6806458 6881591 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 71 CT573191.7 1 75134 -
6881592 6931591 72 N 50000 contig no
6931592 6937572 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 75 CU075714.6 11042 17022 -
6937573 7210107 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 75 BX005212.7 1 272535 +
7210108 7229557 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 75 CR786570.9 54790 74239 +
7229558 7279557 76 N 50000 contig no
7279558 7374165 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 CU468286.4 1 94608 +
7374166 7562881 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 AL807739.6 1 188716 -
7562882 7622788 79 A FO704616.2 28731 88637 +
7622789 7672788 80 N 50000 contig no
7672789 7699974 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 83 FP245458.6 1 27186 +
7699975 7865679 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 83 AL929074.5 1 165705 +
7865680 7883854 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 83 BX908795.10 124294 142468 +
7883855 7933854 84 N 50000 contig no
7933855 8096544 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 87 CR759875.6 1 162690 +
8096545 8251844 86 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 87 CR388402.15 1 155300 -
8251845 8324016 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 87 CR391911.15 1 72172 -
8324017 8374016 88 N 50000 contig no
8374017 8501283 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 91 BX855591.11 1 127267 +
8501284 8666627 90 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 91 CR354380.7 1 165344 +
8666628 8726078 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 91 BX005068.13 1 59451 -
8726079 8776078 92 N 50000 contig no
8776079 8794398 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 97 AL772332.6 1 18320 +
8794399 8972843 94 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 97 CR376771.10 1 178445 +
8972844 9073955 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 97 CR847499.12 1 101112 -
9073956 9240991 96 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 97 CR381538.9 2001 169036 +
9240992 9370274 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 97 BX005016.8 18993 148275 +
9370275 9420274 98 N 50000 contig no
9420275 9485665 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 102 BX950209.14 1 65391 +
9485666 9660917 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 102 BX005365.16 1 175252 -
9660918 9823889 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 102 BX255954.13 1 162972 -
9823890 9883258 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 102 CU571168.4 51960 111328 +
9883259 9933258 103 N 50000 contig no
9933259 10003388 104 FClick to retrieve finished assembled sequence in green bar: rank(s) 104 - 106 BX936299.14 62177 132306 -
10003389 10277247 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 104 - 106 BX649333.9 1 273859 -
10277248 10278679 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 104 - 106 BX000462.10 166240 167671 +
10278680 10328679 107 N 50000 contig no
10328680 10364988 108 FClick to retrieve finished assembled sequence in green bar: rank(s) 108 - 110 CT573253.10 1 36309 +
10364989 10549200 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 108 - 110 CR391917.19 1 184212 -
10549201 10665515 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 108 - 110 AL974309.17 98018 214332 +
10665516 10715515 111 N 50000 contig no
10715516 10764826 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 114 BX571828.6 1 49311 +
10764827 10953594 113 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 114 BX908760.8 1 188768 +
10953595 11022918 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 112 - 114 CU915565.7 6055 75378 +
11022919 11072918 115 N 50000 contig no
11072919 11139259 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 116 - 117 CU570895.8 1 66341 +
11139260 11306358 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 116 - 117 BX950201.12 1 167099 +
11306359 11356358 118 N 50000 contig no
11356359 11360745 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 121 BX005426.17 1 4387 +
11360746 11528364 120 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 121 AL929045.7 1 167619 -
11528365 11550984 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 121 BX005426.17 166901 189520 +
11550985 11600984 122 N 50000 contig no
11600985 11744568 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 125 BX088652.6 1 143584 +
11744569 11908203 124 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 125 CR762396.8 1 163635 -
11908204 11952908 125 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 125 CU468285.5 19477 64181 +
11952909 12002908 126 N 50000 contig no
12002909 12102256 127 FClick to retrieve finished assembled sequence in green bar: rank(s) 127 - 129 BX255890.6 1 99348 +
12102257 12367631 128 FClick to retrieve finished assembled sequence in green bar: rank(s) 127 - 129 BX088533.9 96 265470 +
12367632 12444902 129 FClick to retrieve finished assembled sequence in green bar: rank(s) 127 - 129 CR382370.13 180234 257504 +
12444903 12494902 130 N 50000 contig no
12494903 12596105 131 FClick to retrieve finished assembled sequence in green bar: rank(s) 131 - 133 BX004885.5 1 101203 +
12596106 12739232 132 FClick to retrieve finished assembled sequence in green bar: rank(s) 131 - 133 CR391926.10 4523 147649 +
12739233 12788623 133 FClick to retrieve finished assembled sequence in green bar: rank(s) 131 - 133 CR407598.25 27591 76981 +
12788624 12838623 134 N 50000 contig no
12838624 13085842 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 135 - 137 BX548015.16 1 247219 +
13085843 13246974 136 FClick to retrieve finished assembled sequence in green bar: rank(s) 135 - 137 CR388054.11 1 161132 +
13246975 13337820 137 FClick to retrieve finished assembled sequence in green bar: rank(s) 135 - 137 BX284697.8 1 90846 -
13337821 13387820 138 N 50000 contig no
13387821 13430052 139 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 141 CT990606.13 1 42232 +
13430053 13600318 140 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 141 BX248508.10 3 170268 +
13600319 13775886 141 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 141 CR925879.21 40892 216459 +
13775887 13825886 142 N 50000 contig no
13825887 13901027 143 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 145 CR392035.10 1 75141 +
13901028 14093282 144 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 145 AL935173.9 9054 201308 -
14093283 14104713 145 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 145 CR536615.10 142258 153688 +
14104714 14154713 146 N 50000 contig no
14154714 14186379 147 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 149 CR848003.7 21994 53659 -
14186380 14384598 148 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 149 CR788257.9 1 198219 +
14384599 14386844 149 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 149 CR749750.9 1 2246 -
14386845 14436844 150 N 50000 contig no
14436845 14470223 151 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 153 BX322570.4 1 33379 +
14470224 14716249 152 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 153 AL844217.7 1 246026 +
14716250 14849286 153 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 153 BX276105.6 76450 209486 +
14849287 14899286 154 N 50000 contig no
14899287 15072496 155 FClick to retrieve finished assembled sequence in green bar: rank(s) 155 - 156 AL928968.7 1 173210 +
15072497 15093862 156 FClick to retrieve finished assembled sequence in green bar: rank(s) 155 - 156 CR762429.11 1 21366 -
15093863 15143862 157 N 50000 contig no
15143863 15148702 158 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 160 BX511149.9 1 4840 +
15148703 15299506 159 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 160 CR388021.9 1 150804 +
15299507 15340930 160 FClick to retrieve finished assembled sequence in green bar: rank(s) 158 - 160 FP245442.5 1 41424 -
15340931 15390930 161 N 50000 contig no
15390931 15439760 162 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 CT737206.10 1 48830 +
15439761 15579123 163 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 BX548026.10 8540 147902 -
15579124 15639523 164 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 AL953865.9 97204 157603 +
15639524 15689523 165 N 50000 contig no
15689524 15713169 166 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 CR387992.11 1 23646 +
15713170 15874186 167 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 CR407571.9 1 161017 -
15874187 15938826 168 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 AL929576.7 96434 161073 +
15938827 15988826 169 N 50000 contig no
15988827 15996471 170 FClick to retrieve finished assembled sequence in green bar: rank(s) 170 - 172 AL954317.8 1 7645 +
15996472 16188737 171 FClick to retrieve finished assembled sequence in green bar: rank(s) 170 - 172 CU179663.6 1 192266 -
16188738 16231338 172 FClick to retrieve finished assembled sequence in green bar: rank(s) 170 - 172 BX465849.10 93595 136195 +
16231339 16281338 173 N 50000 contig no
16281339 16295346 174 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 176 FP236157.11 1 14008 +
16295347 16398545 175 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 176 AL627423.27 30127 133325 -
16398546 16428259 176 FClick to retrieve finished assembled sequence in green bar: rank(s) 174 - 176 FP236157.11 110740 140453 +

Details

Help

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH211-160D14
alt_ctg1_1_1
zC160D14
-
-
AL928650.5
finished
178563 CHORI-211 3' / 5'
19618 / 1
- / -
158945
0
Identified
2017-03-07
agp2oracle
humpub
 
2 DKEY-190M16
alt_ctg1_1_1
zK190M16
-
-
BX649405.13
finished
231915 DanioKey 3' / 5'
231320 / 124051
- / -
124645
0
Identified
2017-03-07
agp2oracle
humpub
 
3 DKEY-20I6
alt_ctg1_1_1
zK20I6
-
-
BX005261.9
finished
179883 DanioKey        
  GAP (type-3) length unknown                  
5 CH73-49M18
alt_ctg1_1_2
zH49M18
-
-
CT573178.6
finished
69465 CHORI-73 5' / 3'
32697 / 180979
- / -
32696
0
Identified
2017-03-07
agp2oracle
humpub
 
6 DKEY-115H20
alt_ctg1_1_2
zK115H20
-
-
BX901897.6
finished
180979 DanioKey 5' / 3'
1 / 138289
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
7 CH211-212D2
alt_ctg1_1_2
zC212D2
-
-
BX901912.10
finished
140289 CHORI-211 5' / 3'
1 / 31523
- / -
56025
0
Identified
2017-03-07
agp2oracle
humpub
 
8 DKEYP-57D7
alt_ctg1_1_2
zKp57D7
-
-
BX323038.3
finished
87548 DanioKeypilot        
  GAP (type-3) length unknown                  
10 CH211-243G6
alt_ctg1_1_3
zC243G6
-
-
AL935188.7
finished
160946 CHORI-211 5' / 3'
9296 / 171618
- / -
9295
0
Identified
2017-03-07
agp2oracle
humpub
 
11 CH211-226D23
alt_ctg1_1_3
zC226D23
-
-
BX088528.7
finished
171618 CHORI-211 5' / 3'
1 / 27831
- / -
162962
0
Identified
2017-03-07
agp2oracle
humpub
 
12 DKEY-31E10
alt_ctg1_1_3
zK31E10
-
-
AL953910.14
finished
190793 DanioKey        
  GAP (type-3) length unknown                  
14 CH211-59A4
alt_ctg1_1_4
zC59A4
-
-
BX004756.8
finished
87607 CHORI-211 3' / 5'
66910 / 1
- / -
20697
0
Identified
2017-03-07
agp2oracle
humpub
 
15 DKEY-111N6
alt_ctg1_1_4
zK111N6
-
-
BX537262.7
finished
97035 DanioKey 3' / 3'
97035 / 102839
- / -
54564
0
Identified
2017-03-07
agp2oracle
humpub
 
16 RP71-86K19
alt_ctg1_1_4
bZ86K19
-
-
BX323995.14
finished
157403 RPCI-71        
  GAP (type-3) length unknown                  
18 CH211-109N19
alt_ctg1_1_5
zC109N19
-
-
CT033816.7
finished
166556 CHORI-211 3' / 3'
146500 / 130311
- / -
87218
0
Identified
2017-03-07
agp2oracle
humpub
 
19 DKEY-216J12
alt_ctg1_1_5
zK216J12
-
-
BX247866.12
finished
197473 DanioKey 5' / 5'
15829 / 93492
- / -
109319
0
Identified
2017-03-07
agp2oracle
humpub
 
20 DKEYP-59G7
alt_ctg1_1_5
zKp59G7
-
-
BX511261.13
finished
154220 DanioKeypilot        
  GAP (type-3) length unknown                  
22 DKEY-41G3
alt_ctg1_1_6
zK41G3
-
-
BX511211.6
finished
191183 DanioKey 3' / 5'
189183 / 1
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
23 DKEY-240B22
alt_ctg1_1_6
zK240B22
-
-
BX511162.8
finished
119612 DanioKey        
  GAP (type-3) length unknown                  
25 CH211-226D6
alt_ctg1_1_7
CONTAINER
zC226D6
-
-
CR847936.11
finished
203289 CHORI-211 3' / 3'
6946 / 201673
- / -
201673
0
Identified
2017-03-11
agp2oracle
humpub
 
26 DKEY-12L8
alt_ctg1_1_7
CONTAINED
zK12L8
-
-
BX000435.21
finished
201673 DanioKey 5' / 5'
93609 / 121592
- / -
201673
0
Identified
2017-03-11
agp2oracle
humpub
 
25 CH211-226D6
alt_ctg1_1_7
CONTAINER
zC226D6
-
-
CR847936.11
finished
203289 CHORI-211        
  GAP (type-3) length unknown                  
28 DKEY-228H18
alt_ctg1_1_8
zK228H18
-
-
CU138548.14
finished
106708 DanioKey 3' / 3'
102687 / 189166
- / -
4383
0
Identified
2017-03-07
agp2oracle
humpub
 
29 DKEY-247I12
alt_ctg1_1_8
zK247I12
-
-
BX649383.4
finished
189528 DanioKey 5' / 5'
1 / 48689
- / -
48688
0
Identified
2017-03-07
agp2oracle
humpub
 
30 CH211-135M11
alt_ctg1_1_8
zC135M11
-
-
CT573272.8
finished
108400 CHORI-211        
  GAP (type-3) length unknown                  
32 DKEY-109M11
alt_ctg1_1_9
zK109M11
-
-
BX927112.17
finished
86382 DanioKey 3' / 5'
84382 / 1
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
33 CH211-1B13
alt_ctg1_1_9
zC1B13
-
-
BX927415.8
finished
202881 CHORI-211 3' / 3'
202881 / 8439
- / -
165652
0
Identified
2017-03-07
agp2oracle
humpub
 
34 CH211-226M23
alt_ctg1_1_9
zC226M23
-
-
AL935291.6
finished
174091 CHORI-211        
  GAP (type-3) length unknown                  
36 DKEY-279E10
alt_ctg1_1_10
zK279E10
-
-
CR377220.10
finished
169012 DanioKey 5' / 5'
43531 / 579
- / -
44108
0
Identified
2017-03-07
agp2oracle
humpub
 
37 DKEY-245E14
alt_ctg1_1_10
zK245E14
-
-
BX539315.5
finished
172139 DanioKey 3' / 3'
172139 / 77285
- / -
75638
0
Identified
2017-03-07
agp2oracle
humpub
 
38 CH211-231B2
alt_ctg1_1_10
zC231B2
-
-
BX927393.12
finished
152923 CHORI-211        
  GAP (type-3) length unknown                  
40 CH211-194C21
alt_ctg1_1_11
zC194C21
-
-
BX511093.3
finished
211586 CHORI-211 3' / 5'
65302 / 5443
- / -
151726
0
Identified
2017-03-07
agp2oracle
humpub
 
41 DKEY-29D16
alt_ctg1_1_11
zK29D16
-
-
BX323008.5
finished
216850 DanioKey 3' / 5'
216847 / 26287
- / -
26289
0
Identified
2017-03-07
agp2oracle
humpub
 
42 DKEY-228C11
alt_ctg1_1_11
zK228C11
-
-
BX537280.12
finished
163151 DanioKey        
  GAP (type-3) length unknown                  
44 DKEY-256E7
alt_ctg1_1_12
zK256E7
-
-
CR759951.21
finished
120721 DanioKey 3' / 3'
12547 / 200179
- / -
108174
0
Identified
2017-03-07
agp2oracle
humpub
 
45 DKEY-28C2
alt_ctg1_1_12
zK28C2
-
-
BX950183.9
finished
200179 DanioKey 5' / 5'
2634 / 95056
- / -
97688
0
Identified
2017-03-07
agp2oracle
humpub
 
46 DKEYP-11A2
alt_ctg1_1_12
zKp11A2
-
-
CR774194.4
finished
160120 DanioKeypilot        
  GAP (type-3) length unknown                  
48 DKEY-197M24
alt_ctg1_1_13
zK197M24
-
-
CR391953.15
finished
134716 DanioKey 3' / 3'
51083 / 183095
- / -
88931
0
Identified
2017-03-07
agp2oracle
humpub
 
49 CH211-65M8
alt_ctg1_1_13
zC65M8
-
-
BX927285.6
finished
188393 CHORI-211 5' / 3'
1 / 64121
- / -
104262
0
Identified
2017-03-07
agp2oracle
humpub
 
50 CH211-142E15
alt_ctg1_1_13
zC142E15
-
-
AL929210.4
finished
168383 CHORI-211        
  GAP (type-3) length unknown                  
52 DKEY-13D23
alt_ctg1_1_14
zK13D23
-
-
CR762406.12
finished
140599 DanioKey 3' / 3'
107660 / 193289
- / -
32939
0
Identified
2017-03-07
agp2oracle
humpub
 
53 DKEY-8L3
alt_ctg1_1_14
zK8L3
-
-
CU457781.9
finished
193289 DanioKey 5' / 5'
1 / 56054
- / -
56053
0
Identified
2017-03-07
agp2oracle
humpub
 
54 CH211-285M21
alt_ctg1_1_14
zC285M21
-
-
BX323883.14
finished
195250 CHORI-211        
  GAP (type-3) length unknown                  
56 DKEY-245P14
alt_ctg1_1_15
zK245P14
-
-
BX548248.10
finished
195620 DanioKey 3' / 5'
171638 / 1
- / -
23982
0
Identified
2017-03-07
agp2oracle
humpub
 
57 CH211-155G22
alt_ctg1_1_15
zC155G22
-
-
BX001036.13
finished
178084 CHORI-211 3' / 5'
23689 / 1
- / -
154395
0
Identified
2017-03-07
agp2oracle
humpub
 
58 CH211-42I9
alt_ctg1_1_15
zC42I9
-
-
BX323590.9
finished
162630 CHORI-211        
  GAP (type-3) length unknown                  
60 DKEY-82J4
alt_ctg1_1_16
zK82J4
-
-
CR387920.13
finished
70948 DanioKey 3' / 5'
68948 / 1
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
61 CH211-201G8
alt_ctg1_1_16
zC201G8
-
-
BX119979.9
finished
194023 CHORI-211 3' / 5'
189303 / 406
- / -
5125
0
Identified
2017-03-07
agp2oracle
humpub
 
62 CH211-152J23
alt_ctg1_1_16
zC152J23
-
-
BX511095.9
finished
152368 CHORI-211        
  GAP (type-3) length unknown                  
64 DKEY-285B22
alt_ctg1_1_17
zK285B22
-
-
CT573182.6
finished
23928 DanioKey 3' / 3'
21928 / 176472
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
65 DKEY-75G19
alt_ctg1_1_17
zK75G19
-
-
CR762472.6
finished
176472 DanioKey 5' / 3'
1 / 174092
- / -
3425
0
Identified
2017-03-07
agp2oracle
humpub
 
66 CH211-287C11
alt_ctg1_1_17
zC287C11
-
-
BX323083.29
finished
177517 CHORI-211        
  GAP (type-3) length unknown                  
68 DKEY-253I9
alt_ctg1_1_18
zK253I9
-
-
CR762427.15
finished
209003 DanioKey 3' / 3'
5558 / 222035
- / -
203445
0
Identified
2017-03-07
agp2oracle
humpub
 
69 DKEY-40A23
alt_ctg1_1_18
zK40A23
-
-
CR769783.10
finished
222035 DanioKey 5' / 3'
1 / 75134
- / -
13899
0
Identified
2017-03-07
agp2oracle
humpub
 
70 CH73-61K13
alt_ctg1_1_18
zH61K13
-
-
CT573191.7
finished
89033 CHORI-73        
  GAP (type-3) length unknown                  
72 CH73-280L8
alt_ctg1_1_19
zH280L8
-
-
CU075714.6
finished
17022 CHORI-73 5' / 5'
11042 / 1
- / -
11041
0
Identified
2017-03-07
agp2oracle
humpub
 
73 DKEY-221H2
alt_ctg1_1_19
zK221H2
-
-
BX005212.7
finished
272535 DanioKey 3' / 5'
272535 / 54790
- / -
54789
0
Identified
2017-03-07
agp2oracle
humpub
 
74 CH211-280H4
alt_ctg1_1_19
zC280H4
-
-
CR786570.9
finished
74239 CHORI-211        
  GAP (type-3) length unknown                  
76 CH73-173K21
alt_ctg1_1_20
zH173K21
-
-
CU468286.4
finished
101210 CHORI-73 3' / 3'
94608 / 188716
- / -
6602
0
Identified
2017-03-07
agp2oracle
humpub
 
77 CH211-220F6
alt_ctg1_1_20
zC220F6
-
-
AL807739.6
finished
188716 CHORI-211 5' / 5'
1 / 28731
- / -
28730
0
Identified
2017-03-07
agp2oracle
humpub
 
78 CH73-60M14
alt_ctg1_1_20
zH60M14
-
-
FO704616.2
contiguous
88637 CHORI-73        
  GAP (type-3) length unknown                  
80 CH73-207I17
alt_ctg1_1_21
zH207I17
-
-
FP245458.6
finished
66534 CHORI-73 3' / 5'
27186 / 1
- / -
39348
0
Identified
2017-03-07
agp2oracle
humpub
 
81 CH211-101B14
alt_ctg1_1_21
zC101B14
-
-
AL929074.5
finished
165705 CHORI-211 3' / 5'
165705 / 124294
- / -
124293
0
Identified
2017-03-07
agp2oracle
humpub
 
82 DKEY-92J12
alt_ctg1_1_21
zK92J12
-
-
BX908795.10
finished
142468 DanioKey        
  GAP (type-3) length unknown                  
84 DKEY-274K22
alt_ctg1_1_22
zK274K22
-
-
CR759875.6
finished
216255 DanioKey 3' / 3'
162690 / 155300
- / -
53565
0
Identified
2017-03-07
agp2oracle
humpub
 
85 DKEY-97I21
alt_ctg1_1_22
zK97I21
-
-
CR388402.15
finished
155300 DanioKey 5' / 3'
1 / 72172
- / -
121943
0
Identified
2017-03-07
agp2oracle
humpub
 
86 DKEYP-26A9
alt_ctg1_1_22
zKp26A9
-
-
CR391911.15
finished
194115 DanioKeypilot        
  GAP (type-3) length unknown                  
88 DKEY-237H21
alt_ctg1_1_23
zK237H21
-
-
BX855591.11
finished
131858 DanioKey 3' / 5'
127267 / 1
- / -
4591
0
Identified
2017-03-07
agp2oracle
humpub
 
89 CH211-182L2
alt_ctg1_1_23
zC182L2
-
-
CR354380.7
finished
165344 CHORI-211 3' / 3'
165344 / 59451
- / -
155556
0
Identified
2017-03-07
agp2oracle
humpub
 
90 DKEY-40H17
alt_ctg1_1_23
zK40H17
-
-
BX005068.13
finished
215007 DanioKey        
  GAP (type-3) length unknown                  
92 CH211-150A22
alt_ctg1_1_24
zC150A22
-
-
AL772332.6
finished
175762 CHORI-211 3' / 5'
18320 / 1
- / -
157442
0
Identified
2017-03-07
agp2oracle
humpub
 
93 DKEY-160I7
alt_ctg1_1_24
zK160I7
-
-
CR376771.10
finished
178445 DanioKey 3' / 3'
178445 / 101112
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
94 DKEY-210H10
alt_ctg1_1_24
zK210H10
-
-
CR847499.12
finished
103112 DanioKey 5' / 5'
1 / 2001
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
95 CH211-87B12
alt_ctg1_1_24
zC87B12
-
-
CR381538.9
finished
169036 CHORI-211 3' / 5'
169036 / 18993
- / -
18992
0
Identified
2017-03-07
agp2oracle
humpub
 
96 DKEY-104E13
alt_ctg1_1_24
zK104E13
-
-
BX005016.8
finished
148275 DanioKey        
  GAP (type-3) length unknown                  
98 CH211-62K15
alt_ctg1_1_25
zC62K15
-
-
BX950209.14
finished
135060 CHORI-211 3' / 3'
65391 / 175252
- / -
69669
0
Identified
2017-03-07
agp2oracle
humpub
 
99 DKEY-237I1
alt_ctg1_1_25
zK237I1
-
-
BX005365.16
finished
175252 DanioKey 5' / 3'
1 / 162972
- / -
2000
0
Identified
2017-03-07
agp2oracle
humpub
 
100 CH211-275D2
alt_ctg1_1_25
zC275D2
-
-
BX255954.13
finished
164972 CHORI-211 5' / 5'
1 / 51960
- / -
51959
0
Identified
2017-03-07
agp2oracle
humpub
 
101 CH73-34B5
alt_ctg1_1_25
zH34B5
-
-
CU571168.4
finished
111328 CHORI-73        
  GAP (type-3) length unknown                  
103 CH211-2I17
alt_ctg1_1_26
zC2I17
-
-
BX936299.14
finished
132306 CHORI-211 5' / 3'
62177 / 273859
- / -
62176
0
Identified
2017-03-07
agp2oracle
humpub
 
104 DKEY-200F3
alt_ctg1_1_26
zK200F3
-
-
BX649333.9
finished
273859 DanioKey 5' / 5'
1 / 166240
- / -
166239
0
Identified
2017-03-07
agp2oracle
humpub
 
105 DKEY-114F6
alt_ctg1_1_26
zK114F6
-
-
BX000462.10
finished
167671 DanioKey        
  GAP (type-3) length unknown                  
107 CH211-127N13
alt_ctg1_1_27
zC127N13
-
-
CT573253.10
finished
130092 CHORI-211 3' / 3'
36309 / 184212
- / -
93783
0
Identified
2017-03-07
agp2oracle
humpub
 
108 DKEY-97O8
alt_ctg1_1_27
zK97O8
-
-
CR391917.19
finished
184212 DanioKey 5' / 5'
1 / 98018
- / -
98017
0
Identified
2017-03-07
agp2oracle
humpub
 
109 DKEY-29D5
alt_ctg1_1_27
zK29D5
-
-
AL974309.17
finished
214332 DanioKey        
  GAP (type-3) length unknown                  
111 DKEY-281I15
alt_ctg1_1_28
zK281I15
-
-
BX571828.6
finished
212429 DanioKey 3' / 5'
49311 / 1
- / -
163118
0
Identified
2017-03-07
agp2oracle
humpub
 
112 DKEY-97M4
alt_ctg1_1_28
zK97M4
-
-
BX908760.8
finished
188768 DanioKey 3' / 5'
188768 / 6055
- / -
6054
0
Identified
2017-03-07
agp2oracle
humpub
 
113 CH73-77J21
alt_ctg1_1_28
zH77J21
-
-
CU915565.7
finished
75378 CHORI-73        
  GAP (type-3) length unknown                  
115 CH73-98J8
alt_ctg1_1_29
zH98J8
-
-
CU570895.8
finished
68341 CHORI-73 3' / 5'
66341 / 1
- / -
2000
0
Identified
2017-03-17
agp2oracle
humpub
 
116 CH211-101L11
alt_ctg1_1_29
zC101L11
-
-
BX950201.12
finished
167099 CHORI-211        
  GAP (type-3) length unknown                  
118 DKEY-1H24
alt_ctg1_1_30
CONTAINER
zK1H24
-
-
BX005426.17
finished
189520 DanioKey 3' / 3'
4387 / 167619
- / -
167619
0
Identified
2017-03-07
agp2oracle
humpub
 
119 CH211-159J13
alt_ctg1_1_30
CONTAINED
zC159J13
-
-
AL929045.7
finished
167619 CHORI-211 5' / 5'
1 / 166901
- / -
167619
0
Identified
2017-03-07
agp2oracle
humpub
 
118 DKEY-1H24
alt_ctg1_1_30
CONTAINER
zK1H24
-
-
BX005426.17
finished
189520 DanioKey        
  GAP (type-3) length unknown                  
121 DKEY-256M19
alt_ctg1_1_31
zK256M19
-
-
BX088652.6
finished
161341 DanioKey 3' / 3'
143584 / 163635
- / -
17757
0
Identified
2017-03-07
agp2oracle
humpub
 
122 DKEY-262O12
alt_ctg1_1_31
zK262O12
-
-
CR762396.8
finished
163635 DanioKey 5' / 5'
1 / 19477
- / -
19476
0
Identified
2017-03-07
agp2oracle
humpub
 
123 CH73-115F13
alt_ctg1_1_31
zH115F13
-
-
CU468285.5
finished
64181 CHORI-73        
  GAP (type-3) length unknown                  
125 CH211-236L15
alt_ctg1_1_32
zC236L15
-
-
BX255890.6
finished
175490 CHORI-211 3' / 5'
99348 / 96
- / -
76237
0
Identified
2017-03-07
agp2oracle
humpub
 
126 DKEY-24B15
alt_ctg1_1_32
zK24B15
-
-
BX088533.9
finished
265699 DanioKey 3' / 5'
265470 / 180234
- / -
180462
0
Identified
2017-03-07
agp2oracle
humpub
 
127 DKEY-22O12
alt_ctg1_1_32
zK22O12
-
-
CR382370.13
finished
257504 DanioKey        
  GAP (type-3) length unknown                  
129 CH211-103L6
alt_ctg1_1_33
zC103L6
-
-
BX004885.5
finished
120398 CHORI-211 3' / 5'
101203 / 4523
- / -
23717
0
Identified
2017-03-07
agp2oracle
humpub
 
130 CH211-275N22
alt_ctg1_1_33
zC275N22
-
-
CR391926.10
finished
147649 CHORI-211 3' / 5'
147649 / 27591
- / -
27590
0
Identified
2017-03-07
agp2oracle
humpub
 
131 CH211-141I4
alt_ctg1_1_33
zC141I4
-
-
CR407598.25
finished
76981 CHORI-211        
  GAP (type-3) length unknown                  
133 DKEY-18J14
alt_ctg1_1_34
zK18J14
-
-
BX548015.16
finished
255582 DanioKey 3' / 5'
247219 / 1
- / -
8363
0
Identified
2017-03-07
agp2oracle
humpub
 
134 CH211-82E18
alt_ctg1_1_34
zC82E18
-
-
CR388054.11
finished
162569 CHORI-211 3' / 3'
161132 / 90846
- / -
120537
0
Identified
2017-03-07
agp2oracle
humpub
 
135 DKEY-7M11
alt_ctg1_1_34
zK7M11
-
-
BX284697.8
finished
209946 DanioKey        
  GAP (type-3) length unknown                  
137 CH211-271L9
alt_ctg1_1_35
zC271L9
-
-
CT990606.13
finished
118680 CHORI-211 3' / 5'
42232 / 3
- / -
76450
0
Identified
2017-03-07
agp2oracle
humpub
 
138 CH211-238F11
alt_ctg1_1_35
zC238F11
-
-
BX248508.10
finished
170756 CHORI-211 3' / 5'
170268 / 40892
- / -
41379
0
Identified
2017-03-07
agp2oracle
humpub
 
139 DKEY-6O1
alt_ctg1_1_35
zK6O1
-
-
CR925879.21
finished
216459 DanioKey        
  GAP (type-3) length unknown                  
141 CH211-184N9
alt_ctg1_1_36
zC184N9
-
-
CR392035.10
finished
110627 CHORI-211 3' / 3'
75141 / 201308
- / -
39391
0
Identified
2017-03-07
agp2oracle
humpub
 
142 CH211-196D9
alt_ctg1_1_36
zC196D9
-
-
AL935173.9
finished
205213 CHORI-211 5' / 5'
9054 / 142258
- / -
151310
0
Identified
2017-03-07
agp2oracle
humpub
 
143 CH211-247C17
alt_ctg1_1_36
zC247C17
-
-
CR536615.10
finished
153688 CHORI-211        
  GAP (type-3) length unknown                  
145 DKEY-180K21
alt_ctg1_1_37
zK180K21
-
-
CR848003.7
finished
53659 DanioKey 5' / 5'
21994 / 1
- / -
21993
0
Identified
2017-03-07
agp2oracle
humpub
 
146 DKEY-244H24
alt_ctg1_1_37
zK244H24
-
-
CR788257.9
finished
198219 DanioKey 3' / 3'
198219 / 2246
- / -
157578
0
Identified
2017-03-07
agp2oracle
humpub
 
147 DKEY-222F1
alt_ctg1_1_37
zK222F1
-
-
CR749750.9
finished
159824 DanioKey        
  GAP (type-3) length unknown                  
149 DKEY-27H10
alt_ctg1_1_38
zK27H10
-
-
BX322570.4
finished
185032 DanioKey 3' / 5'
33379 / 1
- / -
151653
0
Identified
2017-03-07
agp2oracle
humpub
 
150 DKEY-218L17
alt_ctg1_1_38
zK218L17
-
-
AL844217.7
finished
246026 DanioKey 3' / 5'
246026 / 76450
- / -
76449
0
Identified
2017-03-07
agp2oracle
humpub
 
151 CH211-194G2
alt_ctg1_1_38
zC194G2
-
-
BX276105.6
finished
209486 CHORI-211        
  GAP (type-3) length unknown                  
153 CH211-103C14
alt_ctg1_1_39
zC103C14
-
-
AL928968.7
finished
173210 CHORI-211 3' / 3'
173210 / 21366
- / -
129200
0
Identified
2017-03-07
agp2oracle
humpub
 
154 CH211-172J10
alt_ctg1_1_39
zC172J10
-
-
CR762429.11
finished
150566 CHORI-211        
  GAP (type-3) length unknown                  
156 DKEYP-14G8
alt_ctg1_1_40
zKp14G8
-
-
BX511149.9
finished
98046 DanioKeypilot 3' / 5'
4840 / 1
- / -
93206
0
Identified
2017-03-07
agp2oracle
humpub
 
157 CH211-189L17
alt_ctg1_1_40
zC189L17
-
-
CR388021.9
finished
150805 CHORI-211 3' / 3'
150804 / 41424
- / -
54370
0
Identified
2017-03-07
agp2oracle
humpub
 
158 CH73-273B10
alt_ctg1_1_40
zH273B10
-
-
FP245442.5
finished
95793 CHORI-73        
  GAP (type-3) length unknown                  
160 DKEY-117M1
alt_ctg1_1_41
zK117M1
-
-
CT737206.10
finished
96443 DanioKey 3' / 3'
48830 / 147902
- / -
47613
0
Identified
2017-03-07
agp2oracle
humpub
 
161 CH211-193D9
alt_ctg1_1_41
zC193D9
-
-
BX548026.10
finished
147902 CHORI-211 5' / 5'
8540 / 97204
- / -
105742
0
Identified
2017-03-07
agp2oracle
humpub
 
162 CH211-113E8
alt_ctg1_1_41
zC113E8
-
-
AL953865.9
finished
157603 CHORI-211        
  GAP (type-3) length unknown                  
164 DKEY-234K24
alt_ctg1_1_42
zK234K24
-
-
CR387992.11
finished
76732 DanioKey 3' / 3'
23646 / 161017
- / -
53086
0
Identified
2017-03-07
agp2oracle
humpub
 
165 CH211-140C16
alt_ctg1_1_42
zC140C16
-
-
CR407571.9
finished
161017 CHORI-211 5' / 5'
1 / 96434
- / -
96433
0
Identified
2017-03-07
agp2oracle
humpub
 
166 CH211-188M17
alt_ctg1_1_42
zC188M17
-
-
AL929576.7
finished
161073 CHORI-211        
  GAP (type-3) length unknown                  
168 DKEY-251I8
alt_ctg1_1_43
zK251I8
-
-
AL954317.8
finished
97165 DanioKey 3' / 3'
7645 / 192266
- / -
89520
0
Identified
2017-03-07
agp2oracle
humpub
 
169 DKEY-197I9
alt_ctg1_1_43
zK197I9
-
-
CU179663.6
finished
192266 DanioKey 5' / 5'
1 / 93595
- / -
93594
0
Identified
2017-03-07
agp2oracle
humpub
 
170 DKEY-263L8
alt_ctg1_1_43
zK263L8
-
-
BX465849.10
finished
136195 DanioKey        
  GAP (type-3) length unknown                  
172 CH211-188P14
alt_ctg1_1_44
CONTAINER
zC188P14
-
-
FP236157.11
finished
140453 CHORI-211 3' / 3'
14008 / 133325
- / -
133325
0
Identified
2017-03-07
agp2oracle
humpub
 
173 RP71-1O24
alt_ctg1_1_44
CONTAINED
bZ1O24
-
-
AL627423.27
finished
133325 RPCI-71 5' / 5'
30127 / 110740
- / -
133325
0
Identified
2017-03-07
agp2oracle
humpub
 
172 CH211-188P14
alt_ctg1_1_44
CONTAINER
zC188P14
-
-
FP236157.11
finished
140453 CHORI-211        

Statistics

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Clone Summary

Number of gaps
43
Gap types
type-3
43
Total clones
130
Clone HTGS Phases
contiguous
1
finished
129
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
6,072,750
Total finished length of fin clones w/ overlap
20,371,426
Total finished length of fin clones w/o overlap
14,298,676
Total overlap length of fin+unfin clones
6,101,480
Total finished length of fin+unfin clones w/ overlap
20,460,063
Total finished length of fin+unfin clones w/o overlap
14,358,583

Dovetails

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# rank accession status length date
1 19 BX247866 unfinished 67,162 Tue, 16 Jan 2018 04:21
2 138 BX248508 unfinished 2 Tue, 16 Jan 2018 04:21

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