ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region GRC__ZEBRAFISH__ALT_DRER_TU_1__14 (TPF updated: 2017-10-17)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 DKEY-160O24
alt_ctg14_1_1
zK160O24
CR407701.6
finished
2 DKEY-58C20
alt_ctg14_1_1
zK58C20
AL954634.12
finished
3 CH211-245D7
alt_ctg14_1_1
zC245D7
BX511266.14
finished
  GAP (type-3) length unknown    
5 DKEYP-115E12
alt_ctg14_1_2
zKp115E12
BX323449.13
finished
6 CH211-246K16
alt_ctg14_1_2
zC246K16
BX088572.25
finished
7 CH73-45O6
alt_ctg14_1_2
zH45O6
CU570988.6
finished
  GAP (type-3) length unknown    
9 CH211-274F20
alt_ctg14_1_3
zC274F20
CU468164.8
finished
10 DKEY-20D18
alt_ctg14_1_3
zK20D18
AL844570.9
finished
11 DKEYP-86F7
alt_ctg14_1_3
zKp86F7
CR293501.10
finished
  GAP (type-3) length unknown    
13 CH211-106A13
alt_ctg14_1_4
zC106A13
BX942840.12
finished
14 CH211-149O12
alt_ctg14_1_4
zC149O12
AL928814.8
finished
15 CH73-14I5
alt_ctg14_1_4
zH14I5
CU929450.6
finished
  GAP (type-3) length unknown    
17 DKEY-100F17
alt_ctg14_1_5
zK100F17
CU302318.12
finished
18 DKEY-92I17
alt_ctg14_1_5
zK92I17
CR931764.18
finished
  GAP (type-3) length unknown    
20 CH211-199D15
alt_ctg14_1_6
zC199D15
CT027803.13
finished
21 DKEY-29F22
alt_ctg14_1_6
zK29F22
AL935304.8
finished
22 DKEY-101K8
alt_ctg14_1_6
zK101K8
CR354536.8
finished
23 CH211-194M19
alt_ctg14_1_6
zC194M19
BX927254.15
finished
  GAP (type-3) length unknown    
25 DKEY-41K7
alt_ctg14_1_7
CONTAINER
zK41K7
BX511226.5
finished
26 DKEY-164N12
alt_ctg14_1_7
CONTAINED
zK164N12
BX005409.10
finished
25 DKEY-41K7
alt_ctg14_1_7
CONTAINER
zK41K7
BX511226.5
finished
27 CH211-231H1
alt_ctg14_1_7
zC231H1
AL807239.5
finished
28 CH211-140K5
alt_ctg14_1_7
zC140K5
AL732632.4
finished
  GAP (type-3) length unknown    
30 CH211-159I8
alt_ctg14_1_8
zC159I8
BX004830.7
finished
31 CH211-257P1
alt_ctg14_1_8
zC257P1
CR382301.12
finished
32 CH211-207L13
alt_ctg14_1_8
zC207L13
AL953884.15
finished
  GAP (type-3) length unknown    
34 CH211-10O8
alt_ctg14_1_9
zC10O8
AL928618.10
finished
35 CH211-151N4
alt_ctg14_1_9
zC151N4
BX890579.18
finished
36 CH211-191N13
alt_ctg14_1_9
zC191N13
AL772279.7
finished
  GAP (type-3) length unknown    
38 DKEY-263P22
alt_ctg14_1_10
zK263P22
CR847498.12
finished
39 DKEY-102F10
alt_ctg14_1_10
zK102F10
BX323858.12
finished
40 CH211-136O20
alt_ctg14_1_10
zC136O20
CR376825.16
finished
  GAP (type-3) length unknown    
42 CH211-143A22
alt_ctg14_1_11
zC143A22
AL772373.23
finished
43 CH211-245G10
alt_ctg14_1_11
zC245G10
CR382291.11
finished
  GAP (type-3) length unknown    
45 CH211-132J7
alt_ctg14_1_12
zC132J7
CR318673.9
finished
46 DKEY-148K19
alt_ctg14_1_12
zK148K19
BX324158.13
finished
47 DKEY-42F19
alt_ctg14_1_12
zK42F19
BX088646.21
finished
  GAP (type-3) length unknown    
49 CH211-175M2
alt_ctg14_1_13
zC175M2
BX470131.7
finished
50 DKEY-47M9
alt_ctg14_1_13
zK47M9
CR925789.6
finished
51 DKEY-27D1
alt_ctg14_1_13
zK27D1
CR925821.12
finished
52 DKEY-48H17
alt_ctg14_1_13
zK48H17
CR854933.8
finished
  GAP (type-3) length unknown    
54 CH211-10K1
alt_ctg14_1_14
zC10K1
BX324205.5
finished
55 CH211-114G7
alt_ctg14_1_14
zC114G7
BX324116.7
finished
56 CH73-25I20
alt_ctg14_1_14
zH25I20
CU062437.8
finished
  GAP (type-3) length unknown    
58 DKEY-3E19
alt_ctg14_1_15
CONTAINER
zK3E19
BX005043.8
finished
59 DKEY-112E1
alt_ctg14_1_15
CONTAINED
zK112E1
BX897746.7
finished
58 DKEY-3E19
alt_ctg14_1_15
CONTAINER
zK3E19
BX005043.8
finished
60 CH211-206E6
alt_ctg14_1_15
zC206E6
BX248327.7
finished
  GAP (type-3) length unknown    
62 DKEY-10H23
alt_ctg14_1_16
zK10H23
AL929322.6
finished
63 DKEY-182M5
alt_ctg14_1_16
zK182M5
CR847800.4
finished
  GAP (type-3) length unknown    
65 CH211-221F10
alt_ctg14_1_17
zC221F10
BX465203.7
finished
66 DKEY-112M3
alt_ctg14_1_17
zK112M3
CR382380.5
finished
67 CH211-143O2
alt_ctg14_1_17
zC143O2
CT956101.9
finished
  GAP (type-3) length unknown    
69 CH211-119P14
alt_ctg14_1_18
zC119P14
BX470157.7
finished
70 DKEYP-9C6
alt_ctg14_1_18
zKp9C6
BX323465.7
finished
71 CH211-20F11
alt_ctg14_1_18
zC20F11
CU179640.8
finished
  GAP (type-3) length unknown    
73 CH211-277C7
alt_ctg14_1_19
zC277C7
AL935195.14
finished
74 DKEY-9I15
alt_ctg14_1_19
zK9I15
CR812847.5
finished
75 CH211-73C20
alt_ctg14_1_19
zC73C20
BX469888.5
finished
76 CH211-51H20
alt_ctg14_1_19
zC51H20
AL928691.7
finished
  GAP (type-3) length unknown    
78 DKEY-116I15
alt_ctg14_1_20
zK116I15
CR854833.11
finished
79 DKEY-104I15
alt_ctg14_1_20
zK104I15
CR457449.7
finished
80 DKEY-172B2
alt_ctg14_1_20
zK172B2
CR753865.8
finished
81 CH211-220E11
alt_ctg14_1_20
CONTAINER
zC220E11
AL954136.13
finished
82 CH211-230M9
alt_ctg14_1_20
CONTAINED
zC230M9
CR381633.6
finished
81 CH211-220E11
alt_ctg14_1_20
CONTAINER
zC220E11
AL954136.13
finished
  GAP (type-3) length unknown    
84 DKEY-18F5
alt_ctg14_1_21
zK18F5
BX088535.6
finished
85 DKEY-33P20
alt_ctg14_1_21
zK33P20
CR626891.17
finished
86 CH73-315I10
alt_ctg14_1_21
zH315I10
FP103063.6
finished
  GAP (type-3) length unknown    
88 CH211-89H11
alt_ctg14_1_22
zC89H11
BX005188.16
finished
89 CH211-107O18
alt_ctg14_1_22
zC107O18
AL929289.9
finished
90 DKEY-15G24
alt_ctg14_1_22
zK15G24
CR847533.11
finished
  GAP (type-3) length unknown    
92 DKEY-34L15
alt_ctg14_1_23
zK34L15
BX005225.22
finished
93 DKEY-276L17
alt_ctg14_1_23
zK276L17
BX537102.13
finished
94 CH73-333A13
alt_ctg14_1_23
zH333A13
CU855887.8
finished
  GAP (type-3) length unknown    
96 CH73-217B10
alt_ctg14_1_24
zH217B10
CU467860.4
finished
97 CH211-163J21
alt_ctg14_1_24
zC163J21
AL929336.12
finished
98 DKEY-111O10
alt_ctg14_1_24
zK111O10
CR382386.8
finished
99 DKEYP-51D11
alt_ctg14_1_24
zKp51D11
BX530719.4
finished
100 CH211-186K13
alt_ctg14_1_24
zC186K13
CR384105.16
finished
  GAP (type-3) length unknown    
102 DKEY-100E19
alt_ctg14_1_25
zK100E19
BX511227.7
finished
103 DKEY-34H12
alt_ctg14_1_25
zK34H12
BX470159.8
finished
104 DKEYP-11E3
alt_ctg14_1_25
zKp11E3
CR846077.10
finished
  GAP (type-3) length unknown    
106 CH211-79C4
alt_ctg14_1_26
zC79C4
BX004988.5
finished
107 RP71-1L9
alt_ctg14_1_26
bZ1L9
AL627263.6
finished
108 DKEYP-79E11
alt_ctg14_1_26
zKp79E11
BX323579.20
finished
  GAP (type-3) length unknown    
110 DKEY-1A23
alt_ctg14_1_27
zK1A23
CR812836.4
finished
111 CH211-162E3
alt_ctg14_1_27
zC162E3
CR751601.8
finished
112 DKEY-31J3
alt_ctg14_1_27
zK31J3
BX571981.5
finished
  GAP (type-3) length unknown    
114 CH73-335M24
alt_ctg14_1_28
zH335M24
FP016208.12
finished
115 DKEY-77M9
alt_ctg14_1_28
zK77M9
CR847524.5
finished
116 DKEY-73E3
alt_ctg14_1_28
zK73E3
CR626939.5
finished
  GAP (type-3) length unknown    
118 CH211-232M8
alt_ctg14_1_29
zC232M8
BX248097.7
finished
119 DKEY-23O10
alt_ctg14_1_29
zK23O10
CR457461.7
finished
120 DKEY-192O1
alt_ctg14_1_29
zK192O1
CU151895.6
finished
  GAP (type-3) length unknown    
122 CH211-203D1
alt_ctg14_1_30
CONTAINER
zC203D1
CR847496.7
finished
123 CH211-167E17
alt_ctg14_1_30
CONTAINED
zC167E17
CU041320.13
finished
122 CH211-203D1
alt_ctg14_1_30
CONTAINER
zC203D1
CR847496.7
finished
  GAP (type-3) length unknown    
125 DKEY-286H17
alt_ctg14_1_31
zK286H17
BX510944.11
finished
126 DKEY-189M18
alt_ctg14_1_31
zK189M18
CR759803.9
finished
127 DKEY-56I16
alt_ctg14_1_31
zK56I16
CR382335.12
finished
128 CH73-164H11
alt_ctg14_1_31
zH164H11
FQ790407.6
finished
  GAP (type-3) length unknown    
130 DKEY-237H12
alt_ctg14_1_32
zK237H12
CR931784.8
finished
131 CH211-81D10
alt_ctg14_1_32
zC81D10
BX005169.18
finished
  GAP (type-3) length unknown    
133 CH73-209C15
alt_ctg14_1_33
zH209C15
FP103055.5
finished
134 DKEYP-34A6
alt_ctg14_1_33
zKp34A6
CR846083.9
finished
135 CH73-112A14
alt_ctg14_1_33
zH112A14
CT030123.6
finished
  GAP (type-3) length unknown    
137 DKEY-15F11
alt_ctg14_1_34
zK15F11
BX465201.38
finished
138 CH211-159K2
alt_ctg14_1_34
zC159K2
BX004867.7
finished
139 DKEY-184E24
alt_ctg14_1_34
zK184E24
BX465197.8
finished
  GAP (type-3) length unknown    
141 CH211-195B11
alt_ctg14_1_35
zC195B11
BX088707.15
finished
142 DKEY-240I4
alt_ctg14_1_35
zK240I4
BX544890.7
finished
143 CH211-229H7
alt_ctg14_1_35
zC229H7
BX470212.6
finished
144 DKEYP-111A10
alt_ctg14_1_35
zKp111A10
BX571718.9
finished
145 CH211-148E4
alt_ctg14_1_35
zC148E4
LO018296.1
contiguous
  GAP (type-3) length unknown    
147 CH73-264J12
alt_ctg14_1_36
zH264J12
CT009726.5
finished
148 CH211-240J13
alt_ctg14_1_36
zC240J13
BX470241.5
finished
149 DKEYP-11A1
alt_ctg14_1_36
zKp11A1
BX322646.10
finished
  GAP (type-3) length unknown    
151 DKEY-152J20
alt_ctg14_1_37
zK152J20
BX548171.4
finished
152 RP71-3J3
alt_ctg14_1_37
bZ3J3
BX469923.7
finished
153 DKEY-148N20
alt_ctg14_1_37
zK148N20
BX663611.13
finished
  GAP (type-3) length unknown    
155 DKEY-149K8
alt_ctg14_1_38
zK149K8
AL954843.8
finished
156 CH211-177D23
alt_ctg14_1_38
zC177D23
BX005028.16
finished
  GAP (type-3) length unknown    
158 DKEY-86P22
alt_ctg14_1_39
zK86P22
BX537109.14
finished
159 CH211-154P8
alt_ctg14_1_39
zC154P8
CR381553.13
finished
160 CH211-235H1
alt_ctg14_1_39
zC235H1
BX890543.18
finished
  GAP (type-3) length unknown    
162 CH211-13I23
alt_ctg14_1_40
zC13I23
CR376776.19
finished
163 CH211-163G6
alt_ctg14_1_40
zC163G6
CU407330.11
finished
164 CH73-36J8
alt_ctg14_1_40
zH36J8
CU467639.6
finished
  GAP (type-3) length unknown    
166 CH73-140E13
alt_ctg14_1_41
zH140E13
LO018125.1
contiguous
167 CH211-245M20
alt_ctg14_1_41
zC245M20
CR381658.11
finished
168 CH211-285C10
alt_ctg14_1_41
zC285C10
CR786577.16
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 33170 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CR407701.6 1 33170 +
33171 228668 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AL954634.12 1 195498 -
228669 248434 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX511266.14 1 19766 -
248435 298434 4 N 50000 contig no
298435 337543 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 BX323449.13 140007 179115 -
337544 501355 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 BX088572.25 1 163812 +
501356 562189 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 7 CU570988.6 7558 68391 +
562190 612189 8 N 50000 contig no
612190 759661 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 CU468164.8 12282 159753 -
759662 1000477 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 AL844570.9 1 240816 -
1000478 1132178 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 11 CR293501.10 1 131701 -
1132179 1182178 12 N 50000 contig no
1182179 1268029 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 BX942840.12 64718 150568 -
1268030 1438698 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 AL928814.8 1 170669 +
1438699 1490562 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 15 CU929450.6 30208 82071 +
1490563 1540562 16 N 50000 contig no
1540563 1751585 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 18 CU302318.12 1 211023 -
1751586 1813215 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 18 CR931764.18 118893 180522 +
1813216 1863215 19 N 50000 contig no
1863216 1969555 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 23 CT027803.13 1 106340 +
1969556 2212395 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 23 AL935304.8 1 242840 -
2212396 2352863 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 23 CR354536.8 1 140468 -
2352864 2360713 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 23 BX927254.15 144838 152687 +
2360714 2410713 24 N 50000 contig no
2410714 2461967 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 29 BX511226.5 201504 252757 -
2461968 2608055 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 29 BX005409.10 1 146088 +
2608056 2609856 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 29 BX511226.5 62683 64483 -
2609857 2820558 28 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 29 AL807239.5 1 210702 -
2820559 2951370 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 29 AL732632.4 1 130812 -
2951371 3001370 30 N 50000 contig no
3001371 3144353 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 33 BX004830.7 58088 201070 -
3144354 3246354 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 33 CR382301.12 1 102001 +
3246355 3441002 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 33 AL953884.15 1 194648 -
3441003 3491002 34 N 50000 contig no
3491003 3528760 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 37 AL928618.10 65750 103507 -
3528761 3678509 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 37 BX890579.18 1 149749 +
3678510 3726066 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 37 AL772279.7 1 47557 -
3726067 3776066 38 N 50000 contig no
3776067 3916559 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 41 CR847498.12 27735 168227 -
3916560 4101022 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 41 BX323858.12 1 184463 -
4101023 4240532 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 41 CR376825.16 1 139510 -
4240533 4290532 42 N 50000 contig no
4290533 4334472 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 44 AL772373.23 1 43940 +
4334473 4494267 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 44 CR382291.11 1 159795 -
4494268 4544267 45 N 50000 contig no
4544268 4610821 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 48 CR318673.9 1 66554 +
4610822 4808693 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 48 BX324158.13 1 197872 +
4808694 4978716 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 48 BX088646.21 65660 235682 +
4978717 5028716 49 N 50000 contig no
5028717 5068706 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 53 BX470131.7 1 39990 +
5068707 5241777 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 53 CR925789.6 1 173071 -
5241778 5424393 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 53 CR925821.12 1 182616 -
5424394 5499880 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 53 CR854933.8 115226 190712 +
5499881 5549880 54 N 50000 contig no
5549881 5615772 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 57 BX324205.5 102655 168546 -
5615773 5783160 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 57 BX324116.7 1 167388 -
5783161 5893094 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 57 CU062437.8 19868 129801 +
5893095 5943094 58 N 50000 contig no
5943095 6039341 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 62 BX005043.8 1 96247 +
6039342 6137650 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 62 BX897746.7 1 98309 -
6137651 6138931 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 62 BX005043.8 200669 201949 +
6138932 6301711 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 62 BX248327.7 528 163307 +
6301712 6351711 63 N 50000 contig no
6351712 6375188 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 64 - 65 AL929322.6 1 23477 +
6375189 6562381 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 64 - 65 CR847800.4 1 187193 +
6562382 6612381 66 N 50000 contig no
6612382 6691291 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 BX465203.7 26550 105459 -
6691292 6775491 68 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 CR382380.5 1 84200 +
6775492 6888193 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 69 CT956101.9 66054 178755 +
6888194 6938193 70 N 50000 contig no
6938194 6971905 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 73 BX470157.7 1 33712 +
6971906 7146087 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 73 BX323465.7 1 174182 +
7146088 7265088 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 73 CU179640.8 39947 158947 +
7265089 7315088 74 N 50000 contig no
7315089 7489537 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 78 AL935195.14 19605 194053 -
7489538 7720059 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 78 CR812847.5 1 230522 +
7720060 7906497 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 78 BX469888.5 1 186438 -
7906498 8032817 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 78 AL928691.7 41001 167320 +
8032818 8082817 79 N 50000 contig no
8082818 8231100 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 85 CR854833.11 1 148283 +
8231101 8418140 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 85 CR457449.7 315 187354 +
8418141 8550511 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 85 CR753865.8 2001 134371 +
8550512 8552511 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 85 AL954136.13 167800 169799 -
8552512 8716421 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 85 CR381633.6 1 163910 +
8716422 8733684 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 85 AL954136.13 1 17263 -
8733685 8783684 86 N 50000 contig no
8783685 8818890 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 89 BX088535.6 1 35206 +
8818891 8966981 88 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 89 CR626891.17 1 148091 +
8966982 9054244 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 89 FP103063.6 3374 90636 +
9054245 9104244 90 N 50000 contig no
9104245 9174515 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 93 BX005188.16 1 70271 +
9174516 9278332 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 93 AL929289.9 1 103817 +
9278333 9436804 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 93 CR847533.11 1 158472 -
9436805 9486804 94 N 50000 contig no
9486805 9527844 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 97 BX005225.22 103989 145028 -
9527845 9767788 96 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 97 BX537102.13 1 239944 -
9767789 9813132 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 97 CU855887.8 4035 49378 +
9813133 9863132 98 N 50000 contig no
9863133 9876898 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 103 CU467860.4 1 13766 +
9876899 9991103 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 103 AL929336.12 1 114205 -
9991104 10077788 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 103 CR382386.8 1 86685 -
10077789 10273685 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 103 BX530719.4 1 195897 -
10273686 10284194 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 103 CR384105.16 1 10509 -
10284195 10334194 104 N 50000 contig no
10334195 10450005 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 107 BX511227.7 1 115811 +
10450006 10656775 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 107 BX470159.8 65 206834 -
10656776 10668957 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 107 CR846077.10 1 12182 -
10668958 10718957 108 N 50000 contig no
10718958 10806271 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 111 BX004988.5 1 87314 +
10806272 10980780 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 111 AL627263.6 13 174521 -
10980781 11060279 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 111 BX323579.20 1 79499 -
11060280 11110279 112 N 50000 contig no
11110280 11250037 113 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 115 CR812836.4 1 139758 +
11250038 11391979 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 115 CR751601.8 2 141943 +
11391980 11516689 115 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 115 BX571981.5 1 124710 -
11516690 11566689 116 N 50000 contig no
11566690 11659183 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 117 - 119 FP016208.12 1 92494 +
11659184 11808331 118 FClick to retrieve finished assembled sequence in green bar: rank(s) 117 - 119 CR847524.5 1 149148 +
11808332 11872769 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 117 - 119 CR626939.5 2001 66438 +
11872770 11922769 120 N 50000 contig no
11922770 11988071 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 123 BX248097.7 1 65302 +
11988072 12105608 122 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 123 CR457461.7 1 117537 +
12105609 12213586 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 123 CU151895.6 20777 128754 +
12213587 12263586 124 N 50000 contig no
12263587 12282051 125 FClick to retrieve finished assembled sequence in green bar: rank(s) 125 - 127 CR847496.7 1 18465 +
12282052 12416355 126 FClick to retrieve finished assembled sequence in green bar: rank(s) 125 - 127 CU041320.13 1 134304 -
12416356 12454676 127 FClick to retrieve finished assembled sequence in green bar: rank(s) 125 - 127 CR847496.7 119421 157741 +
12454677 12504676 128 N 50000 contig no
12504677 12589683 129 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 132 BX510944.11 1 85007 +
12589684 12761173 130 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 132 CR759803.9 1 171490 -
12761174 12918230 131 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 132 CR382335.12 1 157057 -
12918231 12938711 132 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 132 FQ790407.6 40924 61404 +
12938712 12988711 133 N 50000 contig no
12988712 13042088 134 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 135 CR931784.8 1 53377 +
13042089 13199757 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 134 - 135 BX005169.18 1 157669 -
13199758 13249757 136 N 50000 contig no
13249758 13290153 137 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 139 FP103055.5 14359 54754 -
13290154 13453490 138 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 139 CR846083.9 1 163337 -
13453491 13565724 139 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 139 CT030123.6 6141 118374 +
13565725 13615724 140 N 50000 contig no
13615725 13795069 141 FClick to retrieve finished assembled sequence in green bar: rank(s) 141 - 143 BX465201.38 1 179345 +
13795070 13955156 142 FClick to retrieve finished assembled sequence in green bar: rank(s) 141 - 143 BX004867.7 1 160087 -
13955157 13966628 143 FClick to retrieve finished assembled sequence in green bar: rank(s) 141 - 143 BX465197.8 90059 101530 +
13966629 14016628 144 N 50000 contig no
14016629 14102368 145 FClick to retrieve finished assembled sequence in green bar: rank(s) 145 - 148 BX088707.15 1 85740 +
14102369 14196361 146 FClick to retrieve finished assembled sequence in green bar: rank(s) 145 - 148 BX544890.7 1 93993 +
14196362 14288482 147 FClick to retrieve finished assembled sequence in green bar: rank(s) 145 - 148 BX470212.6 2001 94121 +
14288483 14455179 148 FClick to retrieve finished assembled sequence in green bar: rank(s) 145 - 148 BX571718.9 2001 168697 +
14455180 14534801 149 A LO018296.1 70338 149959 +
14534802 14584801 150 N 50000 contig no
14584802 14607781 151 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 153 CT009726.5 1 22980 +
14607782 14738573 152 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 153 BX470241.5 32466 163257 +
14738574 14752575 153 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 153 BX322646.10 1 14002 -
14752576 14802575 154 N 50000 contig no
14802576 14888901 155 FClick to retrieve finished assembled sequence in green bar: rank(s) 155 - 157 BX548171.4 88041 174366 -
14888902 15040540 156 FClick to retrieve finished assembled sequence in green bar: rank(s) 155 - 157 BX469923.7 1 151639 -
15040541 15185329 157 FClick to retrieve finished assembled sequence in green bar: rank(s) 155 - 157 BX663611.13 1 144789 -
15185330 15235329 158 N 50000 contig no
15235330 15439928 159 FClick to retrieve finished assembled sequence in green bar: rank(s) 159 - 160 AL954843.8 1 204599 -
15439929 15575641 160 FClick to retrieve finished assembled sequence in green bar: rank(s) 159 - 160 BX005028.16 13797 149509 +
15575642 15625641 161 N 50000 contig no
15625642 15768940 162 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 BX537109.14 1 143299 +
15768941 15914260 163 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 CR381553.13 1 145320 +
15914261 15914294 164 FClick to retrieve finished assembled sequence in green bar: rank(s) 162 - 164 BX890543.18 1 34 -
15914295 15964294 165 N 50000 contig no
15964295 16076338 166 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 CR376776.19 67632 179675 -
16076339 16218681 167 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 CU407330.11 1 142343 +
16218682 16283216 168 FClick to retrieve finished assembled sequence in green bar: rank(s) 166 - 168 CU467639.6 1 64535 -
16283217 16333216 169 N 50000 contig no
16333217 16397677 170 A LO018125.1 1 64461 +
16397678 16545468 171 FClick to retrieve finished assembled sequence in green bar: rank(s) 171 - 172 CR381658.11 1 147791 +
16545469 16566952 172 FClick to retrieve finished assembled sequence in green bar: rank(s) 171 - 172 CR786577.16 128016 149499 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
40
Gap types
type-3
40
Total clones
128
Clone HTGS Phases
contiguous
2
finished
126
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
5,744,290
Total finished length of fin clones w/ overlap
20,105,211
Total finished length of fin clones w/o overlap
14,360,921
Total overlap length of fin+unfin clones
5,858,289
Total finished length of fin+unfin clones w/ overlap
20,363,293
Total finished length of fin+unfin clones w/o overlap
14,505,004

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